RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 GINM1Q9NU53 330 aa9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.47□□□□□ -0.89
CAPRIN1-208ENST00000530008 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 LIG3P49916 1009 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 TNP2Q05952 138 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 GRIN2CQ14957 1233 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 NBPF6Q5VWK0 638 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 ZNF746Q6NUN9 644 aaPredicted RBP9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 FBXL19Q6PCT2 694 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 RIPOR1Q6ZS17 1223 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 NBPF4Q96M43 638 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 NT5C1AQ9BXI3 368 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 CEP44Q9C0F1 390 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 ZNF408Q9H9D4 720 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 PDZRN3Q9UPQ7 1066 aa9.46□□□□□ -0.9
CAPRIN1-208ENST00000530008 MAP3K6O95382 1288 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 CELA3AP09093 270 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 MAPTP10636 758 aaKnown RBP9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 GARTP22102 1010 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 GRIA4P48058 902 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 UBAP2LQ14157 1087 aaKnown RBP9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 NFE2L2Q16236 605 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 ZNF662Q6ZS27 426 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 CEP120Q8N960 986 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 EFCC1Q9HA90 598 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 STRIP2Q9ULQ0 834 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 TLR6Q9Y2C9 796 aa9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 SUPT16HQ9Y5B9 1047 aaKnown RBP9.45□□□□□ -0.9
CAPRIN1-208ENST00000530008 GREM1O60565 184 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 TRPA1O75762 1119 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 PF4P02776 101 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 ITPKAP23677 461 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 SOX9P48436 509 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 PLAURQ03405 335 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 FAM160A1Q05DH4 1040 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 SPEM2Q0P670 501 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 SERINC3Q13530 473 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 NUCKS1Q9H1E3 243 aaKnown RBP9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 DZANK1Q9NVP4 752 aa9.44□□□□□ -0.9
CAPRIN1-208ENST00000530008 ETFBP38117 255 aa9.43□□□□□ -0.9
CAPRIN1-208ENST00000530008 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
CAPRIN1-208ENST00000530008 COL9A2Q14055 689 aaPredicted RBP9.43□□□□□ -0.9
CAPRIN1-208ENST00000530008 SPRED3Q2MJR0 410 aa9.43□□□□□ -0.9
CAPRIN1-208ENST00000530008 NLGN1Q8N2Q7 840 aa9.43□□□□□ -0.9
CAPRIN1-208ENST00000530008 MRFAP1L1Q96HT8 127 aa9.43□□□□□ -0.9
CAPRIN1-208ENST00000530008 BHLHE41Q9C0J9 482 aaPredicted RBP9.43□□□□□ -0.9
CAPRIN1-208ENST00000530008 MARK1Q9P0L2 795 aa9.43□□□□□ -0.9
CAPRIN1-208ENST00000530008 HCN2Q9UL51 889 aa9.43□□□□□ -0.9
CAPRIN1-208ENST00000530008 METTL12A8MUP2 240 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 K7ELQ4 463 aaPredicted RBP9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 LMNB2Q03252 620 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 CAMK2GQ13555 558 aaPredicted RBP9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 SNAP47Q5SQN1 464 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 DHX32Q7L7V1 743 aaKnown RBP9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 JAZF1Q86VZ6 243 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 BHMTQ93088 406 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 NSUN5Q96P11 429 aaKnown RBP9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 NECAB3Q96P71 396 aaPredicted RBP9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 HHIPQ96QV1 700 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 SLC30A3Q99726 388 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 NDFIP2Q9NV92 336 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 UBP1Q9NZI7 540 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 MRVI1Q9Y6F6 885 aa9.42□□□□□ -0.9
CAPRIN1-208ENST00000530008 NFKBIEO00221 500 aa9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 ENC1O14682 589 aa9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 BNIP3LO60238 219 aa9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 MAN1A2O60476 641 aa9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 EGFLAMQ63HQ2 1017 aa9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 TTBK2Q6IQ55 1244 aa9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 ANKS3Q6ZW76 656 aa9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 TMEM102Q8N9M5 508 aaPredicted RBP9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 GOLM1Q8NBJ4 401 aa9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 MKL1Q969V6 931 aa9.41□□□□□ -0.9
CAPRIN1-208ENST00000530008 A0A096LPE4 126 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 A0A1W2PPZ6 126 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 H7C1W4 665 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 NRLP54845 237 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 APOBRQ0VD83 1088 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 AGMOQ6ZNB7 445 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 RAB44Q7Z6P3 723 aaPredicted RBP9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 ANKRD13AQ8IZ07 590 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 CPLX3Q8WVH0 158 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 NXPE3Q969Y0 559 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 SEC31BQ9NQW1 1179 aa9.4□□□□□ -0.9
CAPRIN1-208ENST00000530008 SBNO2Q9Y2G9 1366 aa9.39□□□□□ -0.91
CAPRIN1-208ENST00000530008 SLC35F4A4IF30 521 aa9.39□□□□□ -0.91
CAPRIN1-208ENST00000530008 TFE3P19532 575 aaPredicted RBP9.39□□□□□ -0.91
CAPRIN1-208ENST00000530008 RPS26P11Q5JNZ5 115 aaPredicted RBP9.39□□□□□ -0.91
CAPRIN1-208ENST00000530008 PCNX4Q63HM2 1172 aa9.39□□□□□ -0.91
CAPRIN1-208ENST00000530008 NKD1Q969G9 470 aa9.39□□□□□ -0.91
CAPRIN1-208ENST00000530008 ZNF576Q9H609 170 aa9.39□□□□□ -0.91
CAPRIN1-208ENST00000530008 SIRPGQ9P1W8 387 aa9.39□□□□□ -0.91
CAPRIN1-208ENST00000530008 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.39□□□□□ -0.91
CAPRIN1-208ENST00000530008 PDE2AO00408 941 aaPredicted RBP9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 KLF4O43474 513 aa9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 PAGE1O75459 146 aa9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 CD33P20138 364 aa9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 RPS26P62854 115 aaKnown RBP9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 PTSQ03393 145 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms