RNA–Protein interactions for RNA: ENST00000529904.2

SNRNP35-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-206ENST00000529904 ZBTB12Q9Y330 459 aaPredicted RBP15.74■□□□□ 0.11
SNRNP35-206ENST00000529904 A0A1B0GUL6 1792 aa15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 USP17L3A6NCW0 530 aa15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 USP17L4A6NCW7 530 aa15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 VIL1P09327 827 aaKnown RBP15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 RLBP1P12271 317 aa15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 HSPA6P17066 643 aa15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 C15orf52Q6ZUT6 534 aaKnown RBP15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 USP50Q70EL3 339 aaPredicted RBP15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 USP17L1Q7RTZ2 530 aa15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 ZNF804AQ7Z570 1209 aa15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 DPF2Q92785 391 aa15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 FBXW7Q969H0 707 aa15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 ADARB2Q9NS39 739 aaKnown RBP15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 CNOT7Q9UIV1 285 aaKnown RBP15.73■□□□□ 0.11
SNRNP35-206ENST00000529904 H7C1D1 291 aa15.72■□□□□ 0.11
SNRNP35-206ENST00000529904 EYA2O00167 538 aa15.72■□□□□ 0.11
SNRNP35-206ENST00000529904 RFX5P48382 616 aaPredicted RBP15.72■□□□□ 0.11
SNRNP35-206ENST00000529904 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
SNRNP35-206ENST00000529904 UBE4AQ14139 1066 aa15.72■□□□□ 0.11
SNRNP35-206ENST00000529904 MICALL2Q8IY33 904 aa15.72■□□□□ 0.11
SNRNP35-206ENST00000529904 SIL1Q9H173 461 aa15.72■□□□□ 0.11
SNRNP35-206ENST00000529904 SRGAP3O43295 1099 aa15.71■□□□□ 0.11
SNRNP35-206ENST00000529904 RSBN1LQ6PCB5 846 aaPredicted RBP15.71■□□□□ 0.11
SNRNP35-206ENST00000529904 PANK1Q8TE04 598 aa15.71■□□□□ 0.11
SNRNP35-206ENST00000529904 SCN9AQ15858 1988 aa15.71■□□□□ 0.1
SNRNP35-206ENST00000529904 PDE8BO95263 885 aa15.7■□□□□ 0.1
SNRNP35-206ENST00000529904 MTX1Q13505 466 aa15.7■□□□□ 0.1
SNRNP35-206ENST00000529904 AGBL3Q8NEM8 1001 aa15.7■□□□□ 0.1
SNRNP35-206ENST00000529904 CD209Q9NNX6 404 aa15.7■□□□□ 0.1
SNRNP35-206ENST00000529904 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
SNRNP35-206ENST00000529904 IRS2Q9Y4H2 1338 aa15.69■□□□□ 0.1
SNRNP35-206ENST00000529904 CIAO1O76071 339 aa15.69■□□□□ 0.1
SNRNP35-206ENST00000529904 GTF2IP78347 998 aa15.69■□□□□ 0.1
SNRNP35-206ENST00000529904 STRIP1Q5VSL9 837 aa15.69■□□□□ 0.1
SNRNP35-206ENST00000529904 TTLL5Q6EMB2 1281 aa15.69■□□□□ 0.1
SNRNP35-206ENST00000529904 VGLL2Q8N8G2 317 aa15.69■□□□□ 0.1
SNRNP35-206ENST00000529904 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.69■□□□□ 0.1
SNRNP35-206ENST00000529904 PA2G4Q9UQ80 394 aaKnown RBP15.69■□□□□ 0.1
SNRNP35-206ENST00000529904 ADAMTSL1Q8N6G6 1762 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 SHTN1A0MZ66 631 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 ZBTB7BO15156 539 aaPredicted RBP15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 HIBADHP31937 336 aaKnown RBP15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 IL15P40933 162 aaPredicted RBP15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 GYG1P46976 350 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 APLP1P51693 650 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 PUM3Q15397 648 aaKnown RBP15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 CAVIN4Q5BKX8 364 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 DACT2Q5SW24 774 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 MAP1SQ66K74 1059 aaPredicted RBP15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 ATG9AQ7Z3C6 839 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 VPS37DQ86XT2 251 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 COPRSQ9NQ92 184 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 CEP126Q9P2H0 1117 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 PSME4Q14997 1843 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
SNRNP35-206ENST00000529904 IFIT1P09914 478 aaKnown RBP15.67■□□□□ 0.1
SNRNP35-206ENST00000529904 USP17L8P0C7I0 530 aa15.67■□□□□ 0.1
SNRNP35-206ENST00000529904 IL1R1P14778 569 aa15.67■□□□□ 0.1
SNRNP35-206ENST00000529904 TBC1D10BQ4KMP7 808 aaPredicted RBP15.67■□□□□ 0.1
SNRNP35-206ENST00000529904 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
SNRNP35-206ENST00000529904 SAMD7Q7Z3H4 446 aa15.67■□□□□ 0.1
SNRNP35-206ENST00000529904 CNTROBQ8N137 903 aa15.67■□□□□ 0.1
SNRNP35-206ENST00000529904 TRPM4Q8TD43 1214 aa15.67■□□□□ 0.1
SNRNP35-206ENST00000529904 ZNF609O15014 1411 aa15.67■□□□□ 0.1
SNRNP35-206ENST00000529904 PNMA6EA0A0J9YXQ4 647 aa15.66■□□□□ 0.1
SNRNP35-206ENST00000529904 SLC5A1P13866 664 aa15.66■□□□□ 0.1
SNRNP35-206ENST00000529904 OGFOD1Q8N543 542 aa15.66■□□□□ 0.1
SNRNP35-206ENST00000529904 FAM84BQ96KN1 310 aaPredicted RBP15.66■□□□□ 0.1
SNRNP35-206ENST00000529904 GMLQ99445 158 aa15.66■□□□□ 0.1
SNRNP35-206ENST00000529904 MXD3Q9BW11 206 aa15.66■□□□□ 0.1
SNRNP35-206ENST00000529904 C1orf115Q9H7X2 142 aa15.66■□□□□ 0.1
SNRNP35-206ENST00000529904 COG6Q9Y2V7 657 aa15.66■□□□□ 0.1
SNRNP35-206ENST00000529904 FRAT2O75474 233 aaPredicted RBP15.65■□□□□ 0.1
SNRNP35-206ENST00000529904 HIRAP54198 1017 aaPredicted RBP15.65■□□□□ 0.1
SNRNP35-206ENST00000529904 MVPQ14764 893 aaKnown RBP15.65■□□□□ 0.1
SNRNP35-206ENST00000529904 KIF4BQ2VIQ3 1234 aa15.65■□□□□ 0.1
SNRNP35-206ENST00000529904 ZC3H15Q8WU90 426 aaKnown RBP15.65■□□□□ 0.1
SNRNP35-206ENST00000529904 LPIN2Q92539 896 aa15.65■□□□□ 0.1
SNRNP35-206ENST00000529904 DDX19BQ9UMR2 479 aa15.65■□□□□ 0.1
SNRNP35-206ENST00000529904 SASH1O94885 1247 aa15.64■□□□□ 0.09
SNRNP35-206ENST00000529904 ITGBL1O95965 494 aaPredicted RBP15.64■□□□□ 0.09
SNRNP35-206ENST00000529904 EGFRP00533 1210 aa15.64■□□□□ 0.09
SNRNP35-206ENST00000529904 FGFR2P21802 821 aa15.64■□□□□ 0.09
SNRNP35-206ENST00000529904 ZNF280AP59817 542 aaPredicted RBP15.64■□□□□ 0.09
SNRNP35-206ENST00000529904 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
SNRNP35-206ENST00000529904 ATP2B3Q16720 1220 aa15.64■□□□□ 0.09
SNRNP35-206ENST00000529904 TDRD7Q8NHU6 1098 aaKnown RBP15.64■□□□□ 0.09
SNRNP35-206ENST00000529904 CHMP4BQ9H444 224 aaKnown RBP15.64■□□□□ 0.09
SNRNP35-206ENST00000529904 BCAMP50895 628 aa15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 G3BP1Q13283 466 aaKnown RBP eCLIP15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 PDE3AQ14432 1141 aa15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 FBXO33Q7Z6M2 555 aa15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 KIAA0825Q8IV33 1275 aa15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 MYOZ2Q9NPC6 264 aa15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 PGAP2Q9UHJ9 254 aa15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 HDAC9Q9UKV0 1011 aa15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 IQSEC3Q9UPP2 1182 aaPredicted RBP15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 JAG2Q9Y219 1238 aa15.63■□□□□ 0.09
SNRNP35-206ENST00000529904 ZNF646O15015 1829 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms