RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 MACROD2A1Z1Q3 448 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 SPDYE4A6NLX3 237 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 NAPAP54920 295 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 PICALMQ13492 652 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 DZIP3Q86Y13 1208 aaKnown RBP9.68□□□□□ -0.86
CTNND1-221ENST00000529873 C8orf58Q8NAV2 365 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 MRPS27Q92552 414 aaKnown RBP9.68□□□□□ -0.86
CTNND1-221ENST00000529873 NLRP3Q96P20 1036 aa9.68□□□□□ -0.86
CTNND1-221ENST00000529873 NIP7Q9Y221 180 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTNND1-221ENST00000529873 UBASH3AP57075 661 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 PRPF4BQ13523 1007 aaKnown RBP9.67□□□□□ -0.86
CTNND1-221ENST00000529873 ANO6Q4KMQ2 910 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 USP48Q86UV5 1035 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 C6orf50Q9HD87 102 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 JADE2Q9NQC1 790 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 RTL1A6NKG5 1358 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 DNMT1P26358 1616 aaKnown RBP9.67□□□□□ -0.86
CTNND1-221ENST00000529873 F13A1P00488 732 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 KRT13P13646 458 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 AFMP43652 599 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 DAAM2Q86T65 1068 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 SNX21Q969T3 373 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 PBRM1Q86U86 1689 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 HSF2BPO75031 334 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 SMAP1Q8IYB5 467 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-221ENST00000529873 SMARCC2Q8TAQ2 1214 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 ANKRD2Q9GZV1 360 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 N4BP3O15049 544 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 MYCNP04198 464 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-221ENST00000529873 SLC39A6Q13433 755 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 HLTFQ14527 1009 aaKnown RBP eCLIP9.67□□□□□ -0.865e-6■□□□□ 9.8
CTNND1-221ENST00000529873 TMEM87AQ8NBN3 555 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 TSNARE1Q96NA8 513 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 DDX23Q9BUQ8 820 aaKnown RBP9.67□□□□□ -0.86
CTNND1-221ENST00000529873 CYLC1P35663 651 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-221ENST00000529873 LMBR1LQ6UX01 489 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 MAATS1Q7Z4T9 603 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
CTNND1-221ENST00000529873 CBX1P83916 185 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 C6orf163Q5TEZ5 329 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 SEPT6Q14141 434 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 SLC9C2Q5TAH2 1124 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 GIMAP6Q6P9H5 292 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 RASAL2Q9UJF2 1139 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 STX8Q9UNK0 236 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 RAD50Q92878 1312 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 PTPRKQ15262 1439 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 PLCG2P16885 1265 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 LMAN1P49257 510 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 UBE4AQ14139 1066 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 RBM17Q96I25 401 aaKnown RBP9.66□□□□□ -0.86
CTNND1-221ENST00000529873 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.66□□□□□ -0.86
CTNND1-221ENST00000529873 V9GYY5 206 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-221ENST00000529873 FBLN1P23142 703 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 LRRC45Q96CN5 670 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 LRRC2Q9BYS8 371 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 YTHDC2Q9H6S0 1430 aaKnown RBP9.66□□□□□ -0.86
CTNND1-221ENST00000529873 F8W031 263 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-221ENST00000529873 DDB1Q16531 1140 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 MAGEB6Q8N7X4 407 aa9.66□□□□□ -0.86
CTNND1-221ENST00000529873 PRPHP41219 470 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 SPAG1Q07617 926 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 TFCP2Q12800 502 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 RNF187Q5TA31 235 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-221ENST00000529873 CEP85Q6P2H3 762 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 BANK1Q8NDB2 785 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-221ENST00000529873 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 PPFIA3O75145 1194 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 SELENOOQ9BVL4 669 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 RNMTO43148 476 aaKnown RBP9.65□□□□□ -0.86
CTNND1-221ENST00000529873 RUFY3Q7L099 469 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.86
CTNND1-221ENST00000529873 HELLSQ9NRZ9 838 aa9.65□□□□□ -0.86
CTNND1-221ENST00000529873 BMS1Q14692 1282 aaKnown RBP9.65□□□□□ -0.87
CTNND1-221ENST00000529873 BICDL2A1A5D9 508 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 FSD2A1L4K1 749 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 IRS4O14654 1257 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-221ENST00000529873 CALML3P27482 149 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 GRIPAP1Q4V328 841 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 SPECC1LQ69YQ0 1117 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 CEP112Q8N8E3 955 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 PLVAPQ9BX97 442 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 SYNCQ9H7C4 482 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 ADGBQ8N7X0 1667 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 TOM1O60784 492 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
CTNND1-221ENST00000529873 PRIMPOLQ96LW4 560 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 POLKQ9UBT6 870 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 PA2G4Q9UQ80 394 aaKnown RBP9.64□□□□□ -0.87
CTNND1-221ENST00000529873 A0A1W2PP64 1363 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 HOXC9P31274 260 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 GNG11P61952 73 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 ASIC1P78348 528 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 KIAA0753Q2KHM9 967 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 CREB3L3Q68CJ9 461 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 PSMA7O14818 248 aa9.64□□□□□ -0.87
CTNND1-221ENST00000529873 TRMT1LQ7Z2T5 733 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms