RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 PTPN12Q05209 780 aaKnown RBP13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 DACT2Q5SW24 774 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 USP17L1Q7RTZ2 530 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 TSPYL6Q8N831 410 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 MINPP1Q9UNW1 487 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 PCDHAC2Q9Y5I4 1007 aa13.76□□□□□ -0.21
LDLRAD3-204ENST00000529759 XDHP47989 1333 aa13.75□□□□□ -0.21
LDLRAD3-204ENST00000529759 SNAP23O00161 211 aa13.75□□□□□ -0.21
LDLRAD3-204ENST00000529759 SASH1O94885 1247 aa13.75□□□□□ -0.21
LDLRAD3-204ENST00000529759 HSP90B1P14625 803 aaKnown RBP13.75□□□□□ -0.21
LDLRAD3-204ENST00000529759 CAP1Q01518 475 aa13.75□□□□□ -0.21
LDLRAD3-204ENST00000529759 CCDC152Q4G0S7 254 aa13.75□□□□□ -0.21
LDLRAD3-204ENST00000529759 CCDC191Q8NCU4 936 aa13.75□□□□□ -0.21
LDLRAD3-204ENST00000529759 CHMP4AQ9BY43 222 aa13.75□□□□□ -0.21
LDLRAD3-204ENST00000529759 GREM2Q9H772 168 aa13.75□□□□□ -0.21
LDLRAD3-204ENST00000529759 AOX1Q06278 1338 aa13.74□□□□□ -0.21
LDLRAD3-204ENST00000529759 PITPNM2Q9BZ72 1349 aa13.74□□□□□ -0.21
LDLRAD3-204ENST00000529759 GPR25O00155 361 aa13.74□□□□□ -0.21
LDLRAD3-204ENST00000529759 TM4SF4P48230 202 aa13.74□□□□□ -0.21
LDLRAD3-204ENST00000529759 ANKRD18AQ8IVF6 992 aa13.74□□□□□ -0.21
LDLRAD3-204ENST00000529759 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
LDLRAD3-204ENST00000529759 METTL22Q9BUU2 404 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD3-204ENST00000529759 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD3-204ENST00000529759 BRCA2P51587 3418 aa13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 DDX58O95786 925 aaKnown RBP13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 ATP2B4P23634 1241 aa13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 FKBP1BP68106 108 aa13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 PRPF38BQ5VTL8 546 aaKnown RBP13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 CCDC30Q5VVM6 783 aa13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 G2E3Q7L622 706 aa13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 PODNQ7Z5L7 613 aa13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 CWC25Q9NXE8 425 aaPredicted RBP13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 HDAC9Q9UKV0 1011 aa13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 MAP3K2Q9Y2U5 619 aa13.73□□□□□ -0.21
LDLRAD3-204ENST00000529759 KIAA0100Q14667 2235 aaKnown RBP13.72□□□□□ -0.21
LDLRAD3-204ENST00000529759 CCT4P50991 539 aaKnown RBP13.72□□□□□ -0.21
LDLRAD3-204ENST00000529759 CTSWP56202 376 aa13.72□□□□□ -0.21
LDLRAD3-204ENST00000529759 TTLL12Q14166 644 aaPredicted RBP13.72□□□□□ -0.21
LDLRAD3-204ENST00000529759 CWF19L2Q2TBE0 894 aaKnown RBP13.72□□□□□ -0.21
LDLRAD3-204ENST00000529759 FBXW7Q969H0 707 aa13.72□□□□□ -0.21
LDLRAD3-204ENST00000529759 ZBED3Q96IU2 234 aaPredicted RBP13.72□□□□□ -0.21
LDLRAD3-204ENST00000529759 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
LDLRAD3-204ENST00000529759 LDLRAD1Q5T700 205 aa13.71□□□□□ -0.21
LDLRAD3-204ENST00000529759 CLMNQ96JQ2 1002 aa13.71□□□□□ -0.21
LDLRAD3-204ENST00000529759 A0A1B0GUL6 1792 aa13.71□□□□□ -0.22
LDLRAD3-204ENST00000529759 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
LDLRAD3-204ENST00000529759 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
LDLRAD3-204ENST00000529759 KIAA0825Q8IV33 1275 aa13.7□□□□□ -0.22
LDLRAD3-204ENST00000529759 CERS5Q8N5B7 392 aa13.7□□□□□ -0.22
LDLRAD3-204ENST00000529759 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
LDLRAD3-204ENST00000529759 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
LDLRAD3-204ENST00000529759 BSDC1Q9NW68 430 aaPredicted RBP13.7□□□□□ -0.22
LDLRAD3-204ENST00000529759 SSC5DA1L4H1 1573 aa13.7□□□□□ -0.22
LDLRAD3-204ENST00000529759 MED23Q9ULK4 1368 aa13.7□□□□□ -0.22
LDLRAD3-204ENST00000529759 CCDC184Q52MB2 194 aa13.69□□□□□ -0.22
LDLRAD3-204ENST00000529759 SPRYD7Q5W111 196 aa13.69□□□□□ -0.22
LDLRAD3-204ENST00000529759 FBXO46Q6PJ61 603 aaPredicted RBP13.69□□□□□ -0.22
LDLRAD3-204ENST00000529759 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
LDLRAD3-204ENST00000529759 STK31Q9BXU1 1019 aa13.69□□□□□ -0.22
LDLRAD3-204ENST00000529759 IL16Q14005 1332 aa13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 IRS2Q9Y4H2 1338 aa13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 IGF2BP3O00425 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 FKTNO75072 461 aa13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 GJA5P36382 358 aa13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 GTF2IP78347 998 aa13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 PKN2Q16513 984 aaKnown RBP13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 STRIP1Q5VSL9 837 aa13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 TTLL5Q6EMB2 1281 aa13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 KSR2Q6VAB6 950 aa13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 WWC1Q8IX03 1113 aa13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 ANGEL1Q9UNK9 670 aaKnown RBP13.68□□□□□ -0.22
LDLRAD3-204ENST00000529759 NEURL1BA8MQ27 555 aa13.67□□□□□ -0.22
LDLRAD3-204ENST00000529759 H7C1W4 665 aa13.67□□□□□ -0.22
LDLRAD3-204ENST00000529759 CASP7P55210 303 aa13.67□□□□□ -0.22
LDLRAD3-204ENST00000529759 NEXNQ0ZGT2 675 aa13.67□□□□□ -0.22
LDLRAD3-204ENST00000529759 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
LDLRAD3-204ENST00000529759 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
LDLRAD3-204ENST00000529759 UBE3BQ7Z3V4 1068 aa13.67□□□□□ -0.22
LDLRAD3-204ENST00000529759 HELBQ8NG08 1087 aaPredicted RBP13.67□□□□□ -0.22
LDLRAD3-204ENST00000529759 NOM1Q5C9Z4 860 aaKnown RBP13.66□□□□□ -0.22
LDLRAD3-204ENST00000529759 OTOP1Q7RTM1 612 aa13.66□□□□□ -0.22
LDLRAD3-204ENST00000529759 CDC5LQ99459 802 aaKnown RBP13.66□□□□□ -0.22
LDLRAD3-204ENST00000529759 CFHR5Q9BXR6 569 aa13.66□□□□□ -0.22
LDLRAD3-204ENST00000529759 COA1Q9GZY4 146 aa13.66□□□□□ -0.22
LDLRAD3-204ENST00000529759 JAG2Q9Y219 1238 aa13.66□□□□□ -0.22
LDLRAD3-204ENST00000529759 ZNF804BA4D1E1 1349 aa13.65□□□□□ -0.22
LDLRAD3-204ENST00000529759 TAF5LO75529 589 aa13.65□□□□□ -0.22
LDLRAD3-204ENST00000529759 ITGA6P23229 1130 aa13.65□□□□□ -0.22
LDLRAD3-204ENST00000529759 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
LDLRAD3-204ENST00000529759 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
LDLRAD3-204ENST00000529759 OGFOD1Q8N543 542 aa13.65□□□□□ -0.22
LDLRAD3-204ENST00000529759 PTPN18Q99952 460 aa13.65□□□□□ -0.22
LDLRAD3-204ENST00000529759 DEFB129Q9H1M3 183 aa13.65□□□□□ -0.22
LDLRAD3-204ENST00000529759 CLRN2A0PK11 232 aa13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 F8W031 263 aaPredicted RBP13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 CHRNDQ07001 517 aa13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 NBPF12Q5TAG4 269 aaPredicted RBP13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 SLC10A4Q96EP9 437 aa13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 WNK4Q96J92 1243 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms