RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 CFAP44Q96MT7 982 aa11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 BABAM1Q9NWV8 329 aa11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 NSFL1CQ9UNZ2 370 aaKnown RBP11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 AKAP11Q9UKA4 1901 aa11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 H7C1D1 291 aa11.14□□□□□ -0.63
TGFBR3-208ENST00000529608 CA12O43570 354 aa11.14□□□□□ -0.63
TGFBR3-208ENST00000529608 ECE2O60344 883 aa11.14□□□□□ -0.63
TGFBR3-208ENST00000529608 NOGQ13253 232 aa11.14□□□□□ -0.63
TGFBR3-208ENST00000529608 SF3B3Q15393 1217 aaKnown RBP11.14□□□□□ -0.63
TGFBR3-208ENST00000529608 C6orf229H3BNL8 230 aa11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 RGMBQ6NW40 437 aa11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 PLBD2Q8NHP8 589 aa11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 TBC1D16Q8TBP0 767 aa11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 PNNQ9H307 717 aaKnown RBP11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 GBA2Q9HCG7 927 aaPredicted RBP11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 SEC31BQ9NQW1 1179 aa11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 SPEF2Q9C093 1822 aa11.13□□□□□ -0.63
TGFBR3-208ENST00000529608 WTIPA6NIX2 430 aaPredicted RBP11.12□□□□□ -0.63
TGFBR3-208ENST00000529608 HDGFL1Q5TGJ6 251 aa11.12□□□□□ -0.63
TGFBR3-208ENST00000529608 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
TGFBR3-208ENST00000529608 TMC4Q7Z404 712 aa11.12□□□□□ -0.63
TGFBR3-208ENST00000529608 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
TGFBR3-208ENST00000529608 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
TGFBR3-208ENST00000529608 SCAF8Q9UPN6 1271 aaKnown RBP11.12□□□□□ -0.63
TGFBR3-208ENST00000529608 LAS1LQ9Y4W2 734 aaKnown RBP11.12□□□□□ -0.63
TGFBR3-208ENST00000529608 IRS4O14654 1257 aaPredicted RBP11.11□□□□□ -0.63
TGFBR3-208ENST00000529608 KIF4BQ2VIQ3 1234 aa11.11□□□□□ -0.63
TGFBR3-208ENST00000529608 MAMSTRQ6ZN01 415 aa11.11□□□□□ -0.63
TGFBR3-208ENST00000529608 JARID2Q92833 1246 aaPredicted RBP11.11□□□□□ -0.63
TGFBR3-208ENST00000529608 GGA3Q9NZ52 723 aa11.11□□□□□ -0.63
TGFBR3-208ENST00000529608 TRPA1O75762 1119 aa11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 SLC10A3P09131 477 aa11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 VIL1P09327 827 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 RPS12P25398 132 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 ZNF157P51786 506 aaPredicted RBP11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 SOX10P56693 466 aa11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 RPS8P62241 208 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 C2orf69Q8N8R5 385 aa11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 DCPSQ96C86 337 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 CDCA5Q96FF9 252 aa11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 CSRNP1Q96S65 589 aa11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 PHAXQ9H814 394 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-208ENST00000529608 LMOD3Q0VAK6 560 aa11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 ANGEL2Q5VTE6 544 aaKnown RBP11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 DUSP27Q5VZP5 1158 aa11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 MOB2Q70IA6 237 aa11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 MFRPQ9BY79 579 aa11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 SAGE1Q9NXZ1 904 aa11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 PODXL2Q9NZ53 605 aa11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 DBF4Q9UBU7 674 aaPredicted RBP11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 GTF3C3Q9Y5Q9 886 aa11.09□□□□□ -0.63
TGFBR3-208ENST00000529608 PAPPA2Q9BXP8 1791 aa11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 ZNF280AP59817 542 aaPredicted RBP11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 TRIM28Q13263 835 aaKnown RBP11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 SCARF1Q14162 830 aa11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 RASAL3Q86YV0 1011 aa11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 FBXO22Q8NEZ5 403 aa11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 GMLQ99445 158 aa11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 EYA3Q99504 573 aa11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 MBIPQ9NS73 344 aa11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 ZNF609O15014 1411 aa11.08□□□□□ -0.64
TGFBR3-208ENST00000529608 UFL1O94874 794 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 HOXB7P09629 217 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 RALBP1Q15311 655 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 PRAMEF18Q5VWM3 479 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 RSBN1LQ6PCB5 846 aaPredicted RBP11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 ZBTB38Q8NAP3 1195 aaPredicted RBP11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 RUNDC1Q96C34 613 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 MYD88Q99836 296 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 MXD3Q9BW11 206 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 ZC3H12CQ9C0D7 883 aaKnown RBP11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 HYPKQ9NX55 129 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 ADAMTS8Q9UP79 889 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 MYH3P11055 1940 aa11.07□□□□□ -0.64
TGFBR3-208ENST00000529608 ELL2O00472 640 aaPredicted RBP11.06□□□□□ -0.64
TGFBR3-208ENST00000529608 ZNF853P0CG23 659 aa11.06□□□□□ -0.64
TGFBR3-208ENST00000529608 SULF1Q8IWU6 871 aa11.06□□□□□ -0.64
TGFBR3-208ENST00000529608 NBPF9Q3BBW0 867 aa11.05□□□□□ -0.64
TGFBR3-208ENST00000529608 RIC3Q7Z5B4 369 aa11.05□□□□□ -0.64
TGFBR3-208ENST00000529608 MYOZ2Q9NPC6 264 aa11.05□□□□□ -0.64
TGFBR3-208ENST00000529608 ANKIB1Q9P2G1 1089 aa11.05□□□□□ -0.64
TGFBR3-208ENST00000529608 GGA1Q9UJY5 639 aa11.05□□□□□ -0.64
TGFBR3-208ENST00000529608 MYBBP1AQ9BQG0 1328 aaKnown RBP11.05□□□□□ -0.64
TGFBR3-208ENST00000529608 UBE2Q2LH0YL09 131 aa11.04□□□□□ -0.64
TGFBR3-208ENST00000529608 PCCAP05165 728 aaPredicted RBP11.04□□□□□ -0.64
TGFBR3-208ENST00000529608 C8orf58Q8NAV2 365 aa11.04□□□□□ -0.64
TGFBR3-208ENST00000529608 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
TGFBR3-208ENST00000529608 A0A1B0GUL6 1792 aa11.03□□□□□ -0.64
TGFBR3-208ENST00000529608 PDE8AO60658 829 aa11.03□□□□□ -0.64
TGFBR3-208ENST00000529608 TBC1D8O95759 1140 aa11.03□□□□□ -0.64
TGFBR3-208ENST00000529608 USP17L8P0C7I0 530 aa11.03□□□□□ -0.64
TGFBR3-208ENST00000529608 CTU1Q7Z7A3 348 aaKnown RBP11.03□□□□□ -0.64
TGFBR3-208ENST00000529608 TXNRD3Q86VQ6 643 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms