RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 GYG1P46976 350 aa30.24■■■□□ 2.43
LDLRAD3-203ENST00000528989 BCAMP50895 628 aa30.24■■■□□ 2.43
LDLRAD3-203ENST00000528989 TTC22Q5TAA0 569 aa30.24■■■□□ 2.43
LDLRAD3-203ENST00000528989 GPATCH3Q96I76 525 aa30.24■■■□□ 2.43
LDLRAD3-203ENST00000528989 BOLA2Q9H3K6 86 aa30.24■■■□□ 2.43
LDLRAD3-203ENST00000528989 NDUFB9Q9Y6M9 179 aa30.24■■■□□ 2.43
LDLRAD3-203ENST00000528989 MAP4K4O95819 1239 aaPredicted RBP30.23■■■□□ 2.43
LDLRAD3-203ENST00000528989 PHKA1P46020 1223 aa30.23■■■□□ 2.43
LDLRAD3-203ENST00000528989 CCDC102BQ68D86 513 aa30.23■■■□□ 2.43
LDLRAD3-203ENST00000528989 TBC1D16Q8TBP0 767 aa30.23■■■□□ 2.43
LDLRAD3-203ENST00000528989 GGA1Q9UJY5 639 aa30.23■■■□□ 2.43
LDLRAD3-203ENST00000528989 LEMD3Q9Y2U8 911 aa30.23■■■□□ 2.43
LDLRAD3-203ENST00000528989 A0A1B0GUL6 1792 aa30.23■■■□□ 2.43
LDLRAD3-203ENST00000528989 MPNDQ8N594 471 aa30.23■■■□□ 2.43
LDLRAD3-203ENST00000528989 TMX4Q9H1E5 349 aaPredicted RBP30.22■■■□□ 2.43
LDLRAD3-203ENST00000528989 DLEC1Q9Y238 1755 aa30.22■■■□□ 2.43
LDLRAD3-203ENST00000528989 C6orf229H3BNL8 230 aa30.21■■■□□ 2.43
LDLRAD3-203ENST00000528989 CCDC158Q5M9N0 1113 aa30.21■■■□□ 2.43
LDLRAD3-203ENST00000528989 DPP8Q6V1X1 898 aaPredicted RBP30.21■■■□□ 2.43
LDLRAD3-203ENST00000528989 FAM84BQ96KN1 310 aaPredicted RBP30.21■■■□□ 2.43
LDLRAD3-203ENST00000528989 ATP5JP18859 108 aa30.21■■■□□ 2.43
LDLRAD3-203ENST00000528989 ATP2B4P23634 1241 aa30.21■■■□□ 2.43
LDLRAD3-203ENST00000528989 IRS2Q9Y4H2 1338 aa30.2■■■□□ 2.43
LDLRAD3-203ENST00000528989 GLRX3O76003 335 aaKnown RBP30.2■■■□□ 2.42
LDLRAD3-203ENST00000528989 SCARF1Q14162 830 aa30.2■■■□□ 2.42
LDLRAD3-203ENST00000528989 DALRD3Q5D0E6 543 aaKnown RBP30.2■■■□□ 2.42
LDLRAD3-203ENST00000528989 TTC39AQ5SRH9 613 aa30.2■■■□□ 2.42
LDLRAD3-203ENST00000528989 LRRC37AA6NMS7 1700 aa30.2■■■□□ 2.42
LDLRAD3-203ENST00000528989 ERC2O15083 957 aa30.19■■■□□ 2.42
LDLRAD3-203ENST00000528989 AOX1Q06278 1338 aa30.19■■■□□ 2.42
LDLRAD3-203ENST00000528989 PI16Q6UXB8 463 aa30.19■■■□□ 2.42
LDLRAD3-203ENST00000528989 BMP2KLQ5H9B9 411 aa30.18■■■□□ 2.42
LDLRAD3-203ENST00000528989 EDC3Q96F86 508 aaKnown RBP30.18■■■□□ 2.42
LDLRAD3-203ENST00000528989 SYT17Q9BSW7 474 aa30.18■■■□□ 2.42
LDLRAD3-203ENST00000528989 IQSEC3Q9UPP2 1182 aaPredicted RBP30.18■■■□□ 2.42
LDLRAD3-203ENST00000528989 BCS1LQ9Y276 419 aa30.18■■■□□ 2.42
LDLRAD3-203ENST00000528989 SNRKQ9NRH2 765 aa30.17■■■□□ 2.42
LDLRAD3-203ENST00000528989 SDSP20132 328 aa30.16■■■□□ 2.42
LDLRAD3-203ENST00000528989 MCAMP43121 646 aa30.16■■■□□ 2.42
LDLRAD3-203ENST00000528989 CAVIN4Q5BKX8 364 aa30.16■■■□□ 2.42
LDLRAD3-203ENST00000528989 FBXO33Q7Z6M2 555 aa30.16■■■□□ 2.42
LDLRAD3-203ENST00000528989 LTBP1Q14766 1721 aa30.15■■■□□ 2.42
LDLRAD3-203ENST00000528989 TRIM6-TRIM34B2RNG4 842 aa30.15■■■□□ 2.42
LDLRAD3-203ENST00000528989 RIMBP2O15034 1052 aa30.15■■■□□ 2.42
LDLRAD3-203ENST00000528989 VPS37DQ86XT2 251 aa30.15■■■□□ 2.42
LDLRAD3-203ENST00000528989 DNAJC2Q99543 621 aaKnown RBP30.15■■■□□ 2.42
LDLRAD3-203ENST00000528989 SNED1Q8TER0 1413 aa30.15■■■□□ 2.42
LDLRAD3-203ENST00000528989 RILPL2Q969X0 211 aa30.14■■■□□ 2.42
LDLRAD3-203ENST00000528989 DUOX1Q9NRD9 1551 aa30.14■■■□□ 2.42
LDLRAD3-203ENST00000528989 HIBADHP31937 336 aaKnown RBP30.14■■■□□ 2.42
LDLRAD3-203ENST00000528989 ARID4AP29374 1257 aaPredicted RBP30.13■■■□□ 2.41
LDLRAD3-203ENST00000528989 FKBP4Q02790 459 aaKnown RBP eCLIP30.13■■■□□ 2.41
LDLRAD3-203ENST00000528989 CC2D2BQ6DHV5 1058 aa30.13■■■□□ 2.41
LDLRAD3-203ENST00000528989 HAUS7Q99871 368 aa30.13■■■□□ 2.41
LDLRAD3-203ENST00000528989 RASGRF1Q13972 1273 aa30.12■■■□□ 2.41
LDLRAD3-203ENST00000528989 CCDC93Q567U6 631 aa30.12■■■□□ 2.41
LDLRAD3-203ENST00000528989 C15orf52Q6ZUT6 534 aaKnown RBP30.12■■■□□ 2.41
LDLRAD3-203ENST00000528989 BRCA1P38398 1863 aaKnown RBP30.11■■■□□ 2.41
LDLRAD3-203ENST00000528989 ARAP2Q8WZ64 1704 aa30.11■■■□□ 2.41
LDLRAD3-203ENST00000528989 WASHC4Q2M389 1173 aa30.11■■■□□ 2.41
LDLRAD3-203ENST00000528989 ZNF512BQ96KM6 892 aaPredicted RBP30.11■■■□□ 2.41
LDLRAD3-203ENST00000528989 ANTXR1Q9H6X2 564 aa30.11■■■□□ 2.41
LDLRAD3-203ENST00000528989 ZAP70P43403 619 aa30.1■■■□□ 2.41
LDLRAD3-203ENST00000528989 RTFDC1Q9BY42 306 aaPredicted RBP30.1■■■□□ 2.41
LDLRAD3-203ENST00000528989 HMG20BQ9P0W2 317 aa30.1■■■□□ 2.41
LDLRAD3-203ENST00000528989 UQCRFS1P1P0C7P4 283 aa30.1■■■□□ 2.41
LDLRAD3-203ENST00000528989 RTKN2Q8IZC4 609 aa30.1■■■□□ 2.41
LDLRAD3-203ENST00000528989 ZC3H12CQ9C0D7 883 aaKnown RBP30.1■■■□□ 2.41
LDLRAD3-203ENST00000528989 GOLIM4O00461 696 aa30.09■■■□□ 2.41
LDLRAD3-203ENST00000528989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.09■■■□□ 2.41
LDLRAD3-203ENST00000528989 MED23Q9ULK4 1368 aa30.08■■■□□ 2.41
LDLRAD3-203ENST00000528989 SPATA5Q8NB90 893 aa30.08■■■□□ 2.41
LDLRAD3-203ENST00000528989 DOK7Q18PE1 504 aa30.07■■■□□ 2.4
LDLRAD3-203ENST00000528989 GNL3LQ9NVN8 582 aaKnown RBP30.07■■■□□ 2.4
LDLRAD3-203ENST00000528989 PAG1Q9NWQ8 432 aa30.07■■■□□ 2.4
LDLRAD3-203ENST00000528989 JAG2Q9Y219 1238 aa30.07■■■□□ 2.4
LDLRAD3-203ENST00000528989 FRAT2O75474 233 aaPredicted RBP30.06■■■□□ 2.4
LDLRAD3-203ENST00000528989 CYP2E1P05181 493 aaPredicted RBP30.06■■■□□ 2.4
LDLRAD3-203ENST00000528989 ZNF804AQ7Z570 1209 aa30.06■■■□□ 2.4
LDLRAD3-203ENST00000528989 CD209Q9NNX6 404 aa30.06■■■□□ 2.4
LDLRAD3-203ENST00000528989 AOC3Q16853 763 aa30.06■■■□□ 2.4
LDLRAD3-203ENST00000528989 TBC1D9Q6ZT07 1266 aa30.06■■■□□ 2.4
LDLRAD3-203ENST00000528989 CNTROBQ8N137 903 aa30.06■■■□□ 2.4
LDLRAD3-203ENST00000528989 SOGA3Q5TF21 947 aa30.05■■■□□ 2.4
LDLRAD3-203ENST00000528989 EVI5LQ96CN4 794 aa30.05■■■□□ 2.4
LDLRAD3-203ENST00000528989 EYA3Q99504 573 aa30.05■■■□□ 2.4
LDLRAD3-203ENST00000528989 ZNF277Q9NRM2 450 aaPredicted RBP30.05■■■□□ 2.4
LDLRAD3-203ENST00000528989 C8orf34Q49A92 452 aa30.04■■■□□ 2.4
LDLRAD3-203ENST00000528989 TDRD7Q8NHU6 1098 aaKnown RBP30.04■■■□□ 2.4
LDLRAD3-203ENST00000528989 PSMD1Q99460 953 aa30.04■■■□□ 2.4
LDLRAD3-203ENST00000528989 COL1A1P02452 1464 aaPredicted RBP30.04■■■□□ 2.4
LDLRAD3-203ENST00000528989 CHGBP05060 677 aa30.04■■■□□ 2.4
LDLRAD3-203ENST00000528989 GRIPAP1Q4V328 841 aa30.04■■■□□ 2.4
LDLRAD3-203ENST00000528989 DBNDD1Q9H9R9 158 aa30.03■■■□□ 2.4
LDLRAD3-203ENST00000528989 AKAP11Q9UKA4 1901 aa30.03■■■□□ 2.4
LDLRAD3-203ENST00000528989 NFKBIEO00221 500 aa30.02■■■□□ 2.4
LDLRAD3-203ENST00000528989 IL1R1P14778 569 aa30.02■■■□□ 2.4
LDLRAD3-203ENST00000528989 CHAF1AQ13111 956 aaPredicted RBP30.02■■■□□ 2.4
LDLRAD3-203ENST00000528989 PIH1D3Q9NQM4 214 aaKnown RBP30.02■■■□□ 2.4
LDLRAD3-203ENST00000528989 KIAA2012Q0VF49 1180 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms