RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 RHPN1Q8TCX5 695 aa17.78■□□□□ 0.44
UBXN1-209ENST00000528907 ZC3H12CQ9C0D7 883 aaKnown RBP17.78■□□□□ 0.44
UBXN1-209ENST00000528907 ZNF609O15014 1411 aa17.78■□□□□ 0.44
UBXN1-209ENST00000528907 ZC3H4Q9UPT8 1303 aaKnown RBP17.77■□□□□ 0.44
UBXN1-209ENST00000528907 KCNJ4P48050 445 aa17.77■□□□□ 0.44
UBXN1-209ENST00000528907 OS9Q13438 667 aaPredicted RBP17.77■□□□□ 0.44
UBXN1-209ENST00000528907 SMC5Q8IY18 1101 aa17.77■□□□□ 0.44
UBXN1-209ENST00000528907 ZNF277Q9NRM2 450 aaPredicted RBP17.77■□□□□ 0.44
UBXN1-209ENST00000528907 TIAM2Q8IVF5 1701 aa17.77■□□□□ 0.44
UBXN1-209ENST00000528907 COL4A5P29400 1685 aa17.77■□□□□ 0.43
UBXN1-209ENST00000528907 PSME4Q14997 1843 aa17.77■□□□□ 0.43
UBXN1-209ENST00000528907 WTIPA6NIX2 430 aaPredicted RBP17.76■□□□□ 0.43
UBXN1-209ENST00000528907 KIF3CO14782 793 aa17.76■□□□□ 0.43
UBXN1-209ENST00000528907 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
UBXN1-209ENST00000528907 APLP1P51693 650 aa17.76■□□□□ 0.43
UBXN1-209ENST00000528907 ATP2B3Q16720 1220 aa17.76■□□□□ 0.43
UBXN1-209ENST00000528907 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.76■□□□□ 0.43
UBXN1-209ENST00000528907 A0A1B0GUL7 405 aa17.75■□□□□ 0.43
UBXN1-209ENST00000528907 PPIP5K2O43314 1243 aa17.75■□□□□ 0.43
UBXN1-209ENST00000528907 IGHDP01880 384 aa17.75■□□□□ 0.43
UBXN1-209ENST00000528907 SLC5A1P13866 664 aa17.75■□□□□ 0.43
UBXN1-209ENST00000528907 TNNI3KQ59H18 835 aa17.75■□□□□ 0.43
UBXN1-209ENST00000528907 LRRCC1Q9C099 1032 aa17.75■□□□□ 0.43
UBXN1-209ENST00000528907 COA1Q9GZY4 146 aa17.75■□□□□ 0.43
UBXN1-209ENST00000528907 FPGT-TNNI3KV9GXZ4 949 aa17.75■□□□□ 0.43
UBXN1-209ENST00000528907 SNAP23O00161 211 aa17.74■□□□□ 0.43
UBXN1-209ENST00000528907 AOC3Q16853 763 aa17.74■□□□□ 0.43
UBXN1-209ENST00000528907 FBXO33Q7Z6M2 555 aa17.74■□□□□ 0.43
UBXN1-209ENST00000528907 TXNRD3Q86VQ6 643 aa17.74■□□□□ 0.43
UBXN1-209ENST00000528907 LARGE2Q8N3Y3 721 aa17.74■□□□□ 0.43
UBXN1-209ENST00000528907 ZNF646O15015 1829 aaPredicted RBP17.73■□□□□ 0.43
UBXN1-209ENST00000528907 FZD9O00144 591 aa17.73■□□□□ 0.43
UBXN1-209ENST00000528907 KLRK1P26718 216 aa17.73■□□□□ 0.43
UBXN1-209ENST00000528907 PODNQ7Z5L7 613 aa17.73■□□□□ 0.43
UBXN1-209ENST00000528907 CLASRPQ8N2M8 674 aaKnown RBP17.73■□□□□ 0.43
UBXN1-209ENST00000528907 JDP2Q8WYK2 163 aa17.73■□□□□ 0.43
UBXN1-209ENST00000528907 FAM84BQ96KN1 310 aaPredicted RBP17.73■□□□□ 0.43
UBXN1-209ENST00000528907 IL1R1P14778 569 aa17.72■□□□□ 0.43
UBXN1-209ENST00000528907 TIMM10P62072 90 aa17.72■□□□□ 0.43
UBXN1-209ENST00000528907 CAVIN4Q5BKX8 364 aa17.72■□□□□ 0.43
UBXN1-209ENST00000528907 C9orf131Q5VYM1 1079 aa17.72■□□□□ 0.43
UBXN1-209ENST00000528907 ZNF804AQ7Z570 1209 aa17.72■□□□□ 0.43
UBXN1-209ENST00000528907 NIM1KQ8IY84 436 aa17.72■□□□□ 0.43
UBXN1-209ENST00000528907 EAF2Q96CJ1 260 aaPredicted RBP17.72■□□□□ 0.43
UBXN1-209ENST00000528907 GPR101Q96P66 508 aaPredicted RBP17.72■□□□□ 0.43
UBXN1-209ENST00000528907 RNF181Q9P0P0 153 aa17.72■□□□□ 0.43
UBXN1-209ENST00000528907 ZNRF3Q9ULT6 936 aa17.72■□□□□ 0.43
UBXN1-209ENST00000528907 RIMBP2O15034 1052 aa17.71■□□□□ 0.43
UBXN1-209ENST00000528907 HIBADHP31937 336 aaKnown RBP17.71■□□□□ 0.43
UBXN1-209ENST00000528907 DNAJC5GQ8N7S2 189 aa17.71■□□□□ 0.43
UBXN1-209ENST00000528907 XAGE2Q96GT9 111 aa17.71■□□□□ 0.43
UBXN1-209ENST00000528907 CD209Q9NNX6 404 aa17.71■□□□□ 0.43
UBXN1-209ENST00000528907 TDRD7Q8NHU6 1098 aaKnown RBP17.7■□□□□ 0.42
UBXN1-209ENST00000528907 ZNF512BQ96KM6 892 aaPredicted RBP17.7■□□□□ 0.42
UBXN1-209ENST00000528907 MYH13Q9UKX3 1938 aa17.7■□□□□ 0.42
UBXN1-209ENST00000528907 KDM2BQ8NHM5 1336 aa17.7■□□□□ 0.42
UBXN1-209ENST00000528907 SCN9AQ15858 1988 aa17.7■□□□□ 0.42
UBXN1-209ENST00000528907 SEMA3EO15041 775 aa17.69■□□□□ 0.42
UBXN1-209ENST00000528907 ECE2O60344 883 aa17.69■□□□□ 0.42
UBXN1-209ENST00000528907 GYG1P46976 350 aa17.69■□□□□ 0.42
UBXN1-209ENST00000528907 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
UBXN1-209ENST00000528907 PDS5AQ29RF7 1337 aaKnown RBP17.69■□□□□ 0.42
UBXN1-209ENST00000528907 YDJCA8MPS7 323 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 TOMM70O94826 608 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 ADORA1P30542 326 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 DOK7Q18PE1 504 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 CCDC102BQ68D86 513 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 AACSQ86V21 672 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 NEUROD6Q96NK8 337 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 DBNDD2Q9BQY9 259 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 DBNDD1Q9H9R9 158 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 PPP4R2Q9NY27 417 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 DBNLQ9UJU6 430 aaKnown RBP17.68■□□□□ 0.42
UBXN1-209ENST00000528907 FAM205AQ6ZU69 1335 aa17.68■□□□□ 0.42
UBXN1-209ENST00000528907 G3V3G9 751 aa17.67■□□□□ 0.42
UBXN1-209ENST00000528907 APBB1O00213 710 aa17.67■□□□□ 0.42
UBXN1-209ENST00000528907 ARID4AP29374 1257 aaPredicted RBP17.67■□□□□ 0.42
UBXN1-209ENST00000528907 BCAMP50895 628 aa17.67■□□□□ 0.42
UBXN1-209ENST00000528907 FKBP1AP62942 108 aaKnown RBP17.67■□□□□ 0.42
UBXN1-209ENST00000528907 NUCB1Q02818 461 aa17.67■□□□□ 0.42
UBXN1-209ENST00000528907 DCAF8Q5TAQ9 597 aa17.67■□□□□ 0.42
UBXN1-209ENST00000528907 ANKRD45Q5TZF3 282 aa17.67■□□□□ 0.42
UBXN1-209ENST00000528907 CENPQQ7L2Z9 268 aaPredicted RBP17.67■□□□□ 0.42
UBXN1-209ENST00000528907 GNL3LQ9NVN8 582 aaKnown RBP17.67■□□□□ 0.42
UBXN1-209ENST00000528907 IFIT2P09913 472 aaKnown RBP17.66■□□□□ 0.42
UBXN1-209ENST00000528907 UQCRFS1P1P0C7P4 283 aa17.66■□□□□ 0.42
UBXN1-209ENST00000528907 PHKA1P46020 1223 aa17.66■□□□□ 0.42
UBXN1-209ENST00000528907 EIF6P56537 245 aaKnown RBP17.66■□□□□ 0.42
UBXN1-209ENST00000528907 CCDC158Q5M9N0 1113 aa17.66■□□□□ 0.42
UBXN1-209ENST00000528907 STRIP1Q5VSL9 837 aa17.66■□□□□ 0.42
UBXN1-209ENST00000528907 VPS37DQ86XT2 251 aa17.66■□□□□ 0.42
UBXN1-209ENST00000528907 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.66■□□□□ 0.42
UBXN1-209ENST00000528907 CCDC8Q9H0W5 538 aaPredicted RBP17.66■□□□□ 0.42
UBXN1-209ENST00000528907 AKAP11Q9UKA4 1901 aa17.66■□□□□ 0.42
UBXN1-209ENST00000528907 SALL3Q9BXA9 1300 aa17.66■□□□□ 0.42
UBXN1-209ENST00000528907 SMARCA5O60264 1052 aaPredicted RBP17.65■□□□□ 0.42
UBXN1-209ENST00000528907 CXCL9Q07325 125 aa17.65■□□□□ 0.42
UBXN1-209ENST00000528907 TNIP1Q15025 636 aa17.65■□□□□ 0.42
UBXN1-209ENST00000528907 CHD1LQ86WJ1 897 aa17.65■□□□□ 0.42
UBXN1-209ENST00000528907 CCDC136Q96JN2 1154 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms