RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 JDP2Q8WYK2 163 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 APPBP2Q92624 585 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 FBXO3Q9UK99 471 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 TSPY3P0CV98 308 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 TSPY8P0CW00 308 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 ATP5JP18859 108 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 SEPT12Q8IYM1 358 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
USP47-207ENST00000527733 PRC1O43663 620 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 NLRP5P59047 1200 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 USPL1Q5W0Q7 1092 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 CEP89Q96ST8 783 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 JAG2Q9Y219 1238 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 MBD4O95243 580 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 RXRBP28702 533 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 MCM9Q9NXL9 1143 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 H0YIN7 160 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 SGSM2O43147 1006 aa17.54■□□□□ 0.4
USP47-207ENST00000527733 EAF2Q96CJ1 260 aaPredicted RBP17.53■□□□□ 0.4
USP47-207ENST00000527733 IFIT1BQ5T764 474 aaKnown RBP17.53■□□□□ 0.4
USP47-207ENST00000527733 FEZ1Q99689 392 aa17.53■□□□□ 0.4
USP47-207ENST00000527733 CCDC194A0A1B0GVG4 234 aa17.53■□□□□ 0.4
USP47-207ENST00000527733 TRIM37O94972 964 aa17.53■□□□□ 0.4
USP47-207ENST00000527733 DHX32Q7L7V1 743 aaKnown RBP17.53■□□□□ 0.4
USP47-207ENST00000527733 CCDC12Q8WUD4 166 aaPredicted RBP17.53■□□□□ 0.4
USP47-207ENST00000527733 SLC26A6Q9BXS9 759 aa17.53■□□□□ 0.4
USP47-207ENST00000527733 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
USP47-207ENST00000527733 PICALMQ13492 652 aa17.53■□□□□ 0.4
USP47-207ENST00000527733 DACH1Q9UI36 760 aa17.53■□□□□ 0.4
USP47-207ENST00000527733 RICTORQ6R327 1708 aa17.53■□□□□ 0.4
USP47-207ENST00000527733 CPS1P31327 1500 aa17.52■□□□□ 0.4
USP47-207ENST00000527733 PPP4R3BQ5MIZ7 849 aa17.52■□□□□ 0.4
USP47-207ENST00000527733 BMP2KQ9NSY1 1161 aaPredicted RBP17.52■□□□□ 0.4
USP47-207ENST00000527733 IQGAP1P46940 1657 aa17.52■□□□□ 0.4
USP47-207ENST00000527733 WDR66Q8TBY9 1149 aa17.52■□□□□ 0.4
USP47-207ENST00000527733 WWC3Q9ULE0 1092 aa17.52■□□□□ 0.4
USP47-207ENST00000527733 STIM1Q13586 685 aa17.52■□□□□ 0.39
USP47-207ENST00000527733 ERVV-1B6SEH8 477 aa17.51■□□□□ 0.39
USP47-207ENST00000527733 MYO3AQ8NEV4 1616 aa17.51■□□□□ 0.39
USP47-207ENST00000527733 FILIP1LQ4L180 1135 aa17.51■□□□□ 0.39
USP47-207ENST00000527733 FAM227BQ96M60 508 aa17.51■□□□□ 0.39
USP47-207ENST00000527733 PPFIA3O75145 1194 aa17.51■□□□□ 0.39
USP47-207ENST00000527733 RTN1Q16799 776 aa17.51■□□□□ 0.39
USP47-207ENST00000527733 DPP8Q6V1X1 898 aaPredicted RBP17.51■□□□□ 0.39
USP47-207ENST00000527733 NLGN1Q8N2Q7 840 aa17.51■□□□□ 0.39
USP47-207ENST00000527733 LRRC7Q96NW7 1537 aa17.51■□□□□ 0.39
USP47-207ENST00000527733 GNAQP50148 359 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 AK2P54819 239 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 CEP57L1Q8IYX8 460 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 MROH1Q8NDA8 1641 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 ALDH1B1P30837 517 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 EPS15P42566 896 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 RBM25P49756 843 aaKnown RBP17.5■□□□□ 0.39
USP47-207ENST00000527733 MAP3K11Q16584 847 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 SPATA5Q8NB90 893 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 VAT1LQ9HCJ6 419 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 PALLDQ8WX93 1383 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 AFF2P51816 1311 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 CRB1P82279 1406 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 ZAP70P43403 619 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 TFIP11Q9UBB9 837 aaKnown RBP17.5■□□□□ 0.39
USP47-207ENST00000527733 JCADQ9P266 1359 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 SSBP05455 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
USP47-207ENST00000527733 CCDC129Q6ZRS4 1044 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 RUFY3Q7L099 469 aa17.5■□□□□ 0.39
USP47-207ENST00000527733 TTLL12Q14166 644 aaPredicted RBP17.49■□□□□ 0.39
USP47-207ENST00000527733 ZSCAN16Q9H4T2 348 aaPredicted RBP17.49■□□□□ 0.39
USP47-207ENST00000527733 MAGEC2Q9UBF1 373 aaPredicted RBP17.49■□□□□ 0.39
USP47-207ENST00000527733 NDUFB9Q9Y6M9 179 aa17.49■□□□□ 0.39
USP47-207ENST00000527733 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
USP47-207ENST00000527733 GPAA1O43292 621 aa17.49■□□□□ 0.39
USP47-207ENST00000527733 SMC2O95347 1197 aa17.49■□□□□ 0.39
USP47-207ENST00000527733 CERKQ8TCT0 537 aa17.49■□□□□ 0.39
USP47-207ENST00000527733 ZHX3Q9H4I2 956 aa17.49■□□□□ 0.39
USP47-207ENST00000527733 GREM2Q9H772 168 aa17.49■□□□□ 0.39
USP47-207ENST00000527733 LRRC24Q50LG9 513 aa17.48■□□□□ 0.39
USP47-207ENST00000527733 CUL5Q93034 780 aa17.48■□□□□ 0.39
USP47-207ENST00000527733 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
USP47-207ENST00000527733 NCOA3Q9Y6Q9 1424 aa17.48■□□□□ 0.39
USP47-207ENST00000527733 BAG4O95429 457 aaKnown RBP17.48■□□□□ 0.39
USP47-207ENST00000527733 PDE6BP35913 854 aa17.48■□□□□ 0.39
USP47-207ENST00000527733 ZSCAN22P10073 491 aaPredicted RBP17.48■□□□□ 0.39
USP47-207ENST00000527733 KCNQ4P56696 695 aa17.48■□□□□ 0.39
USP47-207ENST00000527733 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
USP47-207ENST00000527733 CHST3Q7LGC8 479 aa17.48■□□□□ 0.39
USP47-207ENST00000527733 PPLO60437 1756 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 TTC6Q86TZ1 520 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 MROH2AA6NES4 1674 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 TEX11Q8IYF3 940 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 ALG1Q9BT22 464 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 FER1L4A9Z1Z3 1794 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 HOMER1Q86YM7 354 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 PDILTQ8N807 584 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 RAB34Q9BZG1 259 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 CCDC39Q9UFE4 941 aa17.47■□□□□ 0.39
USP47-207ENST00000527733 CALM1P0DP23 149 aa17.46■□□□□ 0.39
USP47-207ENST00000527733 CALM2P0DP24 149 aa17.46■□□□□ 0.39
USP47-207ENST00000527733 CALM3P0DP25 149 aa17.46■□□□□ 0.39
USP47-207ENST00000527733 ARMT1Q9H993 441 aa17.46■□□□□ 0.39
USP47-207ENST00000527733 GDPD2Q9HCC8 539 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms