RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 ABCC4O15439 1325 aa7.72□□□□□ -1.17
RDX-203ENST00000527537 NPHP3Q7Z494 1330 aa7.72□□□□□ -1.17
RDX-203ENST00000527537 ADGRB3O60242 1522 aa7.72□□□□□ -1.17
RDX-203ENST00000527537 CD109Q6YHK3 1445 aa7.72□□□□□ -1.17
RDX-203ENST00000527537 SHOX2O60902 331 aaPredicted RBP7.72□□□□□ -1.17
RDX-203ENST00000527537 ERLIN1O75477 346 aa7.72□□□□□ -1.17
RDX-203ENST00000527537 IFIT2P09913 472 aaKnown RBP7.72□□□□□ -1.17
RDX-203ENST00000527537 ATP2B2Q01814 1243 aa7.72□□□□□ -1.17
RDX-203ENST00000527537 THUMPD2Q9BTF0 503 aaKnown RBP7.72□□□□□ -1.17
RDX-203ENST00000527537 SUGCTQ9HAC7 445 aa7.72□□□□□ -1.17
RDX-203ENST00000527537 PRDM16Q9HAZ2 1276 aa7.72□□□□□ -1.17
RDX-203ENST00000527537 IFT172Q9UG01 1749 aa7.72□□□□□ -1.17
RDX-203ENST00000527537 SSH2Q76I76 1423 aa7.71□□□□□ -1.17
RDX-203ENST00000527537 HMGB1P09429 215 aaKnown RBP7.71□□□□□ -1.17
RDX-203ENST00000527537 GJB2P29033 226 aa7.71□□□□□ -1.17
RDX-203ENST00000527537 CASP8Q14790 479 aa7.71□□□□□ -1.17
RDX-203ENST00000527537 PARD3BQ8TEW8 1205 aa7.71□□□□□ -1.17
RDX-203ENST00000527537 ANKZF1Q9H8Y5 726 aa7.71□□□□□ -1.17
RDX-203ENST00000527537 LIMCH1Q9UPQ0 1083 aa7.71□□□□□ -1.17
RDX-203ENST00000527537 NRXN1Q9ULB1 1477 aa7.71□□□□□ -1.17
RDX-203ENST00000527537 RNF40O75150 1001 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 FSBPO95073 299 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 PECAM1P16284 738 aaPredicted RBP7.71□□□□□ -1.18
RDX-203ENST00000527537 FBLN1P23142 703 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 TMPOP42166 694 aaKnown RBP7.71□□□□□ -1.18
RDX-203ENST00000527537 PDCD2Q16342 344 aaPredicted RBP7.71□□□□□ -1.18
RDX-203ENST00000527537 STX1AQ16623 288 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 CEP112Q8N8E3 955 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 ABCB6Q9NP58 842 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 VPS37CA5D8V6 355 aaPredicted RBP7.71□□□□□ -1.18
RDX-203ENST00000527537 TRIM74Q86UV6 250 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 TRIM73Q86UV7 250 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 TTC14Q96N46 770 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 OSBPL3Q9H4L5 887 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 RPGRIP1LQ68CZ1 1315 aa7.71□□□□□ -1.18
RDX-203ENST00000527537 FRMD3A2A2Y4 597 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 POTEB2H3BUK9 544 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 SKAP2O75563 359 aaPredicted RBP7.7□□□□□ -1.18
RDX-203ENST00000527537 PRPF6O94906 941 aaKnown RBP7.7□□□□□ -1.18
RDX-203ENST00000527537 IDI1Q13907 227 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 RUFY3Q7L099 469 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 MRPL50Q8N5N7 158 aaKnown RBP7.7□□□□□ -1.18
RDX-203ENST00000527537 DRAXINQ8NBI3 349 aaPredicted RBP7.7□□□□□ -1.18
RDX-203ENST00000527537 PNKPQ96T60 521 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 SCAND2PQ9GZW5 306 aaPredicted RBP7.7□□□□□ -1.18
RDX-203ENST00000527537 ATXN2Q99700 1313 aaKnown RBP7.7□□□□□ -1.18
RDX-203ENST00000527537 MYO3AQ8NEV4 1616 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 FAM163BP0C2L3 166 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 NEFHP12036 1026 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 AK2P54819 239 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 SNX1Q13596 522 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 TLDC1Q6P9B6 456 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 TMC6Q7Z403 805 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 MSANTD4Q8NCY6 345 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 WDR24Q96S15 920 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 STAG3Q9UJ98 1225 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 ADGRB1O14514 1584 aa7.7□□□□□ -1.18
RDX-203ENST00000527537 VWA3AA6NCI4 1184 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 HSPA4P34932 840 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 CDCA2Q69YH5 1023 aaPredicted RBP7.69□□□□□ -1.18
RDX-203ENST00000527537 ANKRD44Q8N8A2 993 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 LARP6Q9BRS8 491 aaKnown RBP7.69□□□□□ -1.18
RDX-203ENST00000527537 KLC4Q9NSK0 619 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 DDX20Q9UHI6 824 aaKnown RBP7.69□□□□□ -1.18
RDX-203ENST00000527537 A0A1W2PP64 1363 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 APBB1O00213 710 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 MAFGO15525 162 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 PRPHP41219 470 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 AARSP49588 968 aaKnown RBP eCLIP7.69□□□□□ -1.18
RDX-203ENST00000527537 PDE1AP54750 535 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 CHMP4BP1P59074 171 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 PIK3R5Q8WYR1 880 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 ZBTB10Q96DT7 871 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 SPATA32Q96LK8 384 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 PPLO60437 1756 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 NEURL4Q96JN8 1562 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 SETBP1Q9Y6X0 1596 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 CDHR2Q9BYE9 1310 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 LRRIQ3A6PVS8 624 aaPredicted RBP7.69□□□□□ -1.18
RDX-203ENST00000527537 ZSCAN12O43309 604 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 SYF2O95926 243 aaKnown RBP7.69□□□□□ -1.18
RDX-203ENST00000527537 IRAK1P51617 712 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 SLC8A3P57103 927 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 GNG11P61952 73 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 CCDC96Q2M329 555 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 CEP85LQ5SZL2 805 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 ARMC3Q5W041 872 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 RCSD1Q6JBY9 416 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 FAM173BQ6P4H8 233 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 RPUSD2Q8IZ73 545 aaKnown RBP7.69□□□□□ -1.18
RDX-203ENST00000527537 FAM177A1Q8N128 213 aaPredicted RBP7.69□□□□□ -1.18
RDX-203ENST00000527537 DHX58Q96C10 678 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 PLEKHF1Q96S99 279 aa7.69□□□□□ -1.18
RDX-203ENST00000527537 GLI2P10070 1586 aa7.68□□□□□ -1.18
RDX-203ENST00000527537 TULP4Q9NRJ4 1543 aa7.68□□□□□ -1.18
RDX-203ENST00000527537 RAB27AP51159 221 aa7.68□□□□□ -1.18
RDX-203ENST00000527537 ACTN3Q08043 901 aaPredicted RBP7.68□□□□□ -1.18
RDX-203ENST00000527537 NAA25Q14CX7 972 aa7.68□□□□□ -1.18
RDX-203ENST00000527537 SRGAP1Q7Z6B7 1085 aa7.68□□□□□ -1.18
RDX-203ENST00000527537 KIRREL3Q8IZU9 778 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms