RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 GORABQ5T7V8 394 aa22.83■■□□□ 1.25
SMPD1-203ENST00000527275 KLHL34Q8N239 644 aa22.83■■□□□ 1.25
SMPD1-203ENST00000527275 CACNA1SQ13698 1873 aa22.83■■□□□ 1.25
SMPD1-203ENST00000527275 ERC2O15083 957 aa22.83■■□□□ 1.24
SMPD1-203ENST00000527275 GLRX3O76003 335 aaKnown RBP22.83■■□□□ 1.24
SMPD1-203ENST00000527275 IFIT1P09914 478 aaKnown RBP22.83■■□□□ 1.24
SMPD1-203ENST00000527275 TGFB2P61812 414 aa22.83■■□□□ 1.24
SMPD1-203ENST00000527275 XDHP47989 1333 aa22.82■■□□□ 1.24
SMPD1-203ENST00000527275 UTRNP46939 3433 aa22.82■■□□□ 1.24
SMPD1-203ENST00000527275 KCNJ4P48050 445 aa22.82■■□□□ 1.24
SMPD1-203ENST00000527275 GPSM2P81274 684 aa22.82■■□□□ 1.24
SMPD1-203ENST00000527275 CASC1Q6TDU7 716 aa22.82■■□□□ 1.24
SMPD1-203ENST00000527275 SLX4Q8IY92 1834 aa22.82■■□□□ 1.24
SMPD1-203ENST00000527275 BOLA2Q9H3K6 86 aa22.82■■□□□ 1.24
SMPD1-203ENST00000527275 ZNF804BA4D1E1 1349 aa22.81■■□□□ 1.24
SMPD1-203ENST00000527275 ATP5JP18859 108 aa22.81■■□□□ 1.24
SMPD1-203ENST00000527275 CCDC158Q5M9N0 1113 aa22.81■■□□□ 1.24
SMPD1-203ENST00000527275 CD2APQ9Y5K6 639 aa22.81■■□□□ 1.24
SMPD1-203ENST00000527275 KLRK1P26718 216 aa22.8■■□□□ 1.24
SMPD1-203ENST00000527275 CCDC102BQ68D86 513 aa22.8■■□□□ 1.24
SMPD1-203ENST00000527275 LRRC37AA6NMS7 1700 aa22.8■■□□□ 1.24
SMPD1-203ENST00000527275 DLEC1Q9Y238 1755 aa22.79■■□□□ 1.24
SMPD1-203ENST00000527275 MAP4K4O95819 1239 aaPredicted RBP22.79■■□□□ 1.24
SMPD1-203ENST00000527275 TTLL6Q8N841 843 aa22.79■■□□□ 1.24
SMPD1-203ENST00000527275 ZNF219Q9P2Y4 722 aaPredicted RBP22.79■■□□□ 1.24
SMPD1-203ENST00000527275 LEMD3Q9Y2U8 911 aa22.79■■□□□ 1.24
SMPD1-203ENST00000527275 PHKA1P46020 1223 aa22.79■■□□□ 1.24
SMPD1-203ENST00000527275 PODXL2Q9NZ53 605 aa22.79■■□□□ 1.24
SMPD1-203ENST00000527275 BCAMP50895 628 aa22.78■■□□□ 1.24
SMPD1-203ENST00000527275 TTC39AQ5SRH9 613 aa22.78■■□□□ 1.24
SMPD1-203ENST00000527275 C7orf43Q8WVR3 580 aa22.78■■□□□ 1.24
SMPD1-203ENST00000527275 TMX4Q9H1E5 349 aaPredicted RBP22.78■■□□□ 1.24
SMPD1-203ENST00000527275 WWC3Q9ULE0 1092 aa22.78■■□□□ 1.24
SMPD1-203ENST00000527275 NDUFB9Q9Y6M9 179 aa22.78■■□□□ 1.24
SMPD1-203ENST00000527275 TRIM6-TRIM34B2RNG4 842 aa22.77■■□□□ 1.24
SMPD1-203ENST00000527275 UFL1O94874 794 aa22.77■■□□□ 1.24
SMPD1-203ENST00000527275 GYG1P46976 350 aa22.77■■□□□ 1.24
SMPD1-203ENST00000527275 TXNRD3Q86VQ6 643 aa22.77■■□□□ 1.24
SMPD1-203ENST00000527275 GGA1Q9UJY5 639 aa22.77■■□□□ 1.24
SMPD1-203ENST00000527275 ARAP2Q8WZ64 1704 aa22.77■■□□□ 1.24
SMPD1-203ENST00000527275 KIAA1551Q9HCM1 1747 aa22.77■■□□□ 1.24
SMPD1-203ENST00000527275 SOCS7O14512 581 aa22.77■■□□□ 1.24
SMPD1-203ENST00000527275 POLLQ9UGP5 575 aa22.77■■□□□ 1.24
SMPD1-203ENST00000527275 SCARF1Q14162 830 aa22.76■■□□□ 1.23
SMPD1-203ENST00000527275 TBC1D16Q8TBP0 767 aa22.76■■□□□ 1.23
SMPD1-203ENST00000527275 RILPL2Q969X0 211 aa22.76■■□□□ 1.23
SMPD1-203ENST00000527275 FAM84BQ96KN1 310 aaPredicted RBP22.76■■□□□ 1.23
SMPD1-203ENST00000527275 GPR101Q96P66 508 aaPredicted RBP22.76■■□□□ 1.23
SMPD1-203ENST00000527275 TBC1D2Q9BYX2 928 aa22.76■■□□□ 1.23
SMPD1-203ENST00000527275 PIM2Q9P1W9 311 aa22.76■■□□□ 1.23
SMPD1-203ENST00000527275 ATP2B4P23634 1241 aa22.76■■□□□ 1.23
SMPD1-203ENST00000527275 MPNDQ8N594 471 aa22.76■■□□□ 1.23
SMPD1-203ENST00000527275 CAVIN4Q5BKX8 364 aa22.75■■□□□ 1.23
SMPD1-203ENST00000527275 DNAJC2Q99543 621 aaKnown RBP22.75■■□□□ 1.23
SMPD1-203ENST00000527275 HAUS7Q99871 368 aa22.75■■□□□ 1.23
SMPD1-203ENST00000527275 LTBP1Q14766 1721 aa22.75■■□□□ 1.23
SMPD1-203ENST00000527275 C21orf2O43822 256 aa22.74■■□□□ 1.23
SMPD1-203ENST00000527275 DPP8Q6V1X1 898 aaPredicted RBP22.74■■□□□ 1.23
SMPD1-203ENST00000527275 EDC3Q96F86 508 aaKnown RBP22.74■■□□□ 1.23
SMPD1-203ENST00000527275 IRS2Q9Y4H2 1338 aa22.74■■□□□ 1.23
SMPD1-203ENST00000527275 C6orf229H3BNL8 230 aa22.74■■□□□ 1.23
SMPD1-203ENST00000527275 MCAMP43121 646 aa22.74■■□□□ 1.23
SMPD1-203ENST00000527275 PI16Q6UXB8 463 aa22.74■■□□□ 1.23
SMPD1-203ENST00000527275 ZNF512BQ96KM6 892 aaPredicted RBP22.74■■□□□ 1.23
SMPD1-203ENST00000527275 ARID4AP29374 1257 aaPredicted RBP22.73■■□□□ 1.23
SMPD1-203ENST00000527275 VPS37DQ86XT2 251 aa22.73■■□□□ 1.23
SMPD1-203ENST00000527275 NLGN2Q8NFZ4 835 aa22.73■■□□□ 1.23
SMPD1-203ENST00000527275 SNRKQ9NRH2 765 aa22.73■■□□□ 1.23
SMPD1-203ENST00000527275 FKBP4Q02790 459 aaKnown RBP eCLIP22.73■■□□□ 1.23
SMPD1-203ENST00000527275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.73■■□□□ 1.23
SMPD1-203ENST00000527275 USP26Q9BXU7 913 aa22.73■■□□□ 1.23
SMPD1-203ENST00000527275 UQCRFS1P1P0C7P4 283 aa22.72■■□□□ 1.23
SMPD1-203ENST00000527275 FBXO33Q7Z6M2 555 aa22.72■■□□□ 1.23
SMPD1-203ENST00000527275 CNTROBQ8N137 903 aa22.72■■□□□ 1.23
SMPD1-203ENST00000527275 IQSEC3Q9UPP2 1182 aaPredicted RBP22.72■■□□□ 1.23
SMPD1-203ENST00000527275 HIBADHP31937 336 aaKnown RBP22.72■■□□□ 1.23
SMPD1-203ENST00000527275 RASGRF1Q13972 1273 aa22.72■■□□□ 1.23
SMPD1-203ENST00000527275 KIF2CQ99661 725 aa22.72■■□□□ 1.23
SMPD1-203ENST00000527275 DUOX1Q9NRD9 1551 aa22.71■■□□□ 1.23
SMPD1-203ENST00000527275 REC8O95072 547 aa22.71■■□□□ 1.23
SMPD1-203ENST00000527275 DALRD3Q5D0E6 543 aaKnown RBP22.71■■□□□ 1.23
SMPD1-203ENST00000527275 CC2D2BQ6DHV5 1058 aa22.71■■□□□ 1.23
SMPD1-203ENST00000527275 EVI5LQ96CN4 794 aa22.71■■□□□ 1.23
SMPD1-203ENST00000527275 FHDC1Q9C0D6 1143 aaPredicted RBP22.71■■□□□ 1.23
SMPD1-203ENST00000527275 AKAP11Q9UKA4 1901 aa22.71■■□□□ 1.23
SMPD1-203ENST00000527275 GOLIM4O00461 696 aa22.7■■□□□ 1.23
SMPD1-203ENST00000527275 C15orf52Q6ZUT6 534 aaKnown RBP22.7■■□□□ 1.23
SMPD1-203ENST00000527275 BRCA1P38398 1863 aaKnown RBP22.7■■□□□ 1.22
SMPD1-203ENST00000527275 ZAP70P43403 619 aa22.7■■□□□ 1.22
SMPD1-203ENST00000527275 ANTXR1Q9H6X2 564 aa22.7■■□□□ 1.22
SMPD1-203ENST00000527275 PAG1Q9NWQ8 432 aa22.7■■□□□ 1.22
SMPD1-203ENST00000527275 HMG20BQ9P0W2 317 aa22.7■■□□□ 1.22
SMPD1-203ENST00000527275 CHMLP26374 656 aa22.69■■□□□ 1.22
SMPD1-203ENST00000527275 SPATA5Q8NB90 893 aa22.69■■□□□ 1.22
SMPD1-203ENST00000527275 GNL3LQ9NVN8 582 aaKnown RBP22.69■■□□□ 1.22
SMPD1-203ENST00000527275 SNED1Q8TER0 1413 aa22.69■■□□□ 1.22
SMPD1-203ENST00000527275 MED23Q9ULK4 1368 aa22.68■■□□□ 1.22
SMPD1-203ENST00000527275 AK9Q5TCS8 1911 aa22.68■■□□□ 1.22
SMPD1-203ENST00000527275 RIMBP2O15034 1052 aa22.68■■□□□ 1.22
SMPD1-203ENST00000527275 ESYT1Q9BSJ8 1104 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms