RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TRPM7Q96QT4 1865 aa13.24□□□□□ -0.29
PRPF40B-204ENST00000527253 ZNF609O15014 1411 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 PSME4Q14997 1843 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 UTYO14607 1347 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 USP17L3A6NCW0 530 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 USP17L4A6NCW7 530 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 TAF5LO75529 589 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 IFIT5Q13325 482 aaKnown RBP13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 USP17L1Q7RTZ2 530 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 C9orf78Q9NZ63 289 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 CHMP3Q9Y3E7 222 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 TLL2Q9Y6L7 1015 aa13.23□□□□□ -0.29
PRPF40B-204ENST00000527253 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-204ENST00000527253 COA1Q9GZY4 146 aa13.22□□□□□ -0.29
PRPF40B-204ENST00000527253 ZNF646O15015 1829 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-204ENST00000527253 ADM5C9JUS6 153 aa13.21□□□□□ -0.29
PRPF40B-204ENST00000527253 FOXN1O15353 648 aa13.21□□□□□ -0.29
PRPF40B-204ENST00000527253 USP17L8P0C7I0 530 aa13.21□□□□□ -0.29
PRPF40B-204ENST00000527253 CYP4F22Q6NT55 531 aa13.21□□□□□ -0.29
PRPF40B-204ENST00000527253 SAPCD2Q86UD0 394 aa13.21□□□□□ -0.29
PRPF40B-204ENST00000527253 CAPNS2Q96L46 248 aa13.21□□□□□ -0.29
PRPF40B-204ENST00000527253 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-204ENST00000527253 ZNF408Q9H9D4 720 aa13.21□□□□□ -0.29
PRPF40B-204ENST00000527253 WBP1LQ9NX94 342 aa13.21□□□□□ -0.29
PRPF40B-204ENST00000527253 PTPRCP08575 1304 aa13.2□□□□□ -0.3
PRPF40B-204ENST00000527253 SCARF1Q14162 830 aa13.2□□□□□ -0.3
PRPF40B-204ENST00000527253 CCDC57Q2TAC2 916 aa13.2□□□□□ -0.3
PRPF40B-204ENST00000527253 STRIP1Q5VSL9 837 aa13.2□□□□□ -0.3
PRPF40B-204ENST00000527253 KRT26Q7Z3Y9 468 aa13.2□□□□□ -0.3
PRPF40B-204ENST00000527253 ANKRD44Q8N8A2 993 aa13.2□□□□□ -0.3
PRPF40B-204ENST00000527253 USP44Q9H0E7 712 aa13.2□□□□□ -0.3
PRPF40B-204ENST00000527253 MYOZ2Q9NPC6 264 aa13.2□□□□□ -0.3
PRPF40B-204ENST00000527253 A0A1B0GUL6 1792 aa13.2□□□□□ -0.3
PRPF40B-204ENST00000527253 ALDH1L2Q3SY69 923 aa13.19□□□□□ -0.3
PRPF40B-204ENST00000527253 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
PRPF40B-204ENST00000527253 C15orf52Q6ZUT6 534 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-204ENST00000527253 FBXW7Q969H0 707 aa13.19□□□□□ -0.3
PRPF40B-204ENST00000527253 DCPSQ96C86 337 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-204ENST00000527253 BICC1Q9H694 974 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-204ENST00000527253 CD209Q9NNX6 404 aa13.19□□□□□ -0.3
PRPF40B-204ENST00000527253 GGA3Q9NZ52 723 aa13.19□□□□□ -0.3
PRPF40B-204ENST00000527253 SCAF8Q9UPN6 1271 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-204ENST00000527253 PLIN1O60240 522 aa13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 AOC2O75106 756 aa13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 KCNJ4P48050 445 aa13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 GTF2IP78347 998 aa13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 GRM1Q13255 1194 aa13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 RABL6Q3YEC7 729 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 ANGEL2Q5VTE6 544 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 MIER1Q8N108 512 aa13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 SMC4Q9NTJ3 1288 aa13.18□□□□□ -0.3
PRPF40B-204ENST00000527253 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
PRPF40B-204ENST00000527253 TAF7LQ5H9L4 462 aa13.17□□□□□ -0.3
PRPF40B-204ENST00000527253 CERS5Q8N5B7 392 aa13.17□□□□□ -0.3
PRPF40B-204ENST00000527253 CNNM1Q9NRU3 951 aa13.17□□□□□ -0.3
PRPF40B-204ENST00000527253 NOB1Q9ULX3 412 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-204ENST00000527253 RIPOR2Q9Y4F9 1068 aa13.17□□□□□ -0.3
PRPF40B-204ENST00000527253 IL1R1P14778 569 aa13.16□□□□□ -0.3
PRPF40B-204ENST00000527253 ECE1P42892 770 aa13.16□□□□□ -0.3
PRPF40B-204ENST00000527253 LRRC24Q50LG9 513 aa13.16□□□□□ -0.3
PRPF40B-204ENST00000527253 CDCA5Q96FF9 252 aa13.16□□□□□ -0.3
PRPF40B-204ENST00000527253 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
PRPF40B-204ENST00000527253 ZIC5Q96T25 663 aa13.16□□□□□ -0.3
PRPF40B-204ENST00000527253 THSD7BQ9C0I4 1608 aa13.16□□□□□ -0.3
PRPF40B-204ENST00000527253 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 BRPF1P55201 1214 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 KIAA0825Q8IV33 1275 aa13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 SULF1Q8IWU6 871 aa13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 KLHDC4Q8TBB5 520 aa13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 GBA2Q9HCG7 927 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 JAG2Q9Y219 1238 aa13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 PCDHAC2Q9Y5I4 1007 aa13.15□□□□□ -0.3
PRPF40B-204ENST00000527253 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 WNT10BO00744 389 aa13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 SASH1O94885 1247 aa13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 HSPA8P11142 646 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 GYG1P46976 350 aa13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 LBX1P52954 281 aa13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 HUNKP57058 714 aa13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 MAP2K1Q02750 393 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 AIDAQ96BJ3 306 aa13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 FAM84BQ96KN1 310 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-204ENST00000527253 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 FAM155AB1AL88 458 aaPredicted RBP13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 MAP2K2P36507 400 aa13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 UBE4AQ14139 1066 aa13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 TNS4Q8IZW8 715 aa13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 VGLL2Q8N8G2 317 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms