RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 NEURL1BA8MQ27 555 aa24.08■■□□□ 1.45
CAPN1-206ENST00000526966 CCDC27Q2M243 656 aa24.08■■□□□ 1.45
CAPN1-206ENST00000526966 CWF19L2Q2TBE0 894 aaKnown RBP24.08■■□□□ 1.45
CAPN1-206ENST00000526966 STK31Q9BXU1 1019 aa24.08■■□□□ 1.45
CAPN1-206ENST00000526966 RNF186Q9NXI6 227 aa24.08■■□□□ 1.45
CAPN1-206ENST00000526966 RASAL3Q86YV0 1011 aa24.07■■□□□ 1.44
CAPN1-206ENST00000526966 CSRNP1Q96S65 589 aa24.07■■□□□ 1.44
CAPN1-206ENST00000526966 H7C1W4 665 aa24.06■■□□□ 1.44
CAPN1-206ENST00000526966 CCT4P50991 539 aaKnown RBP24.06■■□□□ 1.44
CAPN1-206ENST00000526966 DACT2Q5SW24 774 aa24.06■■□□□ 1.44
CAPN1-206ENST00000526966 TNRC18O15417 2968 aaPredicted RBP24.06■■□□□ 1.44
CAPN1-206ENST00000526966 TRPA1O75762 1119 aa24.05■■□□□ 1.44
CAPN1-206ENST00000526966 TWISTNBQ3B726 338 aaPredicted RBP24.05■■□□□ 1.44
CAPN1-206ENST00000526966 G2E3Q7L622 706 aa24.05■■□□□ 1.44
CAPN1-206ENST00000526966 REM2Q8IYK8 340 aaPredicted RBP24.05■■□□□ 1.44
CAPN1-206ENST00000526966 MYO3BQ8WXR4 1341 aa24.05■■□□□ 1.44
CAPN1-206ENST00000526966 A0A1B0GUL6 1792 aa24.04■■□□□ 1.44
CAPN1-206ENST00000526966 UBE3BQ7Z3V4 1068 aa24.04■■□□□ 1.44
CAPN1-206ENST00000526966 WWC1Q8IX03 1113 aa24.04■■□□□ 1.44
CAPN1-206ENST00000526966 PLA2G12BQ9BX93 195 aa24.04■■□□□ 1.44
CAPN1-206ENST00000526966 COA1Q9GZY4 146 aa24.04■■□□□ 1.44
CAPN1-206ENST00000526966 PDE4DIPQ5VU43 2346 aa24.04■■□□□ 1.44
CAPN1-206ENST00000526966 NBPF9Q3BBW0 867 aa24.03■■□□□ 1.44
CAPN1-206ENST00000526966 CCDC184Q52MB2 194 aa24.03■■□□□ 1.44
CAPN1-206ENST00000526966 STRIP1Q5VSL9 837 aa24.03■■□□□ 1.44
CAPN1-206ENST00000526966 LEMD3Q9Y2U8 911 aa24.03■■□□□ 1.44
CAPN1-206ENST00000526966 TXNRD3Q86VQ6 643 aa24.02■■□□□ 1.44
CAPN1-206ENST00000526966 MXD3Q9BW11 206 aa24.02■■□□□ 1.44
CAPN1-206ENST00000526966 IL16Q14005 1332 aa24.02■■□□□ 1.44
CAPN1-206ENST00000526966 WNT10BO00744 389 aa24.01■■□□□ 1.43
CAPN1-206ENST00000526966 SLC4A2P04920 1241 aa24.01■■□□□ 1.43
CAPN1-206ENST00000526966 IGHMBP2P38935 993 aaKnown RBP24.01■■□□□ 1.43
CAPN1-206ENST00000526966 CASP7P55210 303 aa24.01■■□□□ 1.43
CAPN1-206ENST00000526966 GCKRQ14397 625 aa24.01■■□□□ 1.43
CAPN1-206ENST00000526966 SCAF8Q9UPN6 1271 aaKnown RBP24.01■■□□□ 1.43
CAPN1-206ENST00000526966 MMP14P50281 582 aa24■■□□□ 1.43
CAPN1-206ENST00000526966 FLIIQ13045 1269 aa24■■□□□ 1.43
CAPN1-206ENST00000526966 NCBP3Q53F19 620 aaKnown RBP24■■□□□ 1.43
CAPN1-206ENST00000526966 MOB2Q70IA6 237 aa24■■□□□ 1.43
CAPN1-206ENST00000526966 OGFOD1Q8N543 542 aa24■■□□□ 1.43
CAPN1-206ENST00000526966 ECM29Q5VYK3 1845 aa23.99■■□□□ 1.43
CAPN1-206ENST00000526966 CSF1RP07333 972 aa23.99■■□□□ 1.43
CAPN1-206ENST00000526966 ITGA6P23229 1130 aa23.99■■□□□ 1.43
CAPN1-206ENST00000526966 ANKRD2Q9GZV1 360 aa23.99■■□□□ 1.43
CAPN1-206ENST00000526966 ZNF804BA4D1E1 1349 aa23.99■■□□□ 1.43
CAPN1-206ENST00000526966 SLC34A2O95436 690 aa23.98■■□□□ 1.43
CAPN1-206ENST00000526966 KLRK1P26718 216 aa23.98■■□□□ 1.43
CAPN1-206ENST00000526966 PRAMEF18Q5VWM3 479 aa23.98■■□□□ 1.43
CAPN1-206ENST00000526966 UBE2Q2LH0YL09 131 aa23.97■■□□□ 1.43
CAPN1-206ENST00000526966 LINS1Q8NG48 757 aa23.97■■□□□ 1.43
CAPN1-206ENST00000526966 DNAAF4Q8WXU2 420 aa23.97■■□□□ 1.43
CAPN1-206ENST00000526966 FBXW7Q969H0 707 aa23.97■■□□□ 1.43
CAPN1-206ENST00000526966 MYH16Q9H6N6 1097 aa23.97■■□□□ 1.43
CAPN1-206ENST00000526966 TTLL5Q6EMB2 1281 aa23.96■■□□□ 1.43
CAPN1-206ENST00000526966 CTU1Q7Z7A3 348 aaKnown RBP23.96■■□□□ 1.43
CAPN1-206ENST00000526966 MPHOSPH8Q99549 860 aa23.96■■□□□ 1.43
CAPN1-206ENST00000526966 FANCIQ9NVI1 1328 aa23.95■■□□□ 1.42
CAPN1-206ENST00000526966 SASH1O94885 1247 aa23.95■■□□□ 1.42
CAPN1-206ENST00000526966 FKBP5Q13451 457 aaPredicted RBP23.95■■□□□ 1.42
CAPN1-206ENST00000526966 ZBED3Q96IU2 234 aaPredicted RBP23.95■■□□□ 1.42
CAPN1-206ENST00000526966 IRS2Q9Y4H2 1338 aa23.94■■□□□ 1.42
CAPN1-206ENST00000526966 CHRNDQ07001 517 aa23.94■■□□□ 1.42
CAPN1-206ENST00000526966 COL1A1P02452 1464 aaPredicted RBP23.94■■□□□ 1.42
CAPN1-206ENST00000526966 LAMB1P07942 1786 aa23.93■■□□□ 1.42
CAPN1-206ENST00000526966 NF2P35240 595 aa23.93■■□□□ 1.42
CAPN1-206ENST00000526966 APOBEC3FQ8IUX4 373 aaKnown RBP23.93■■□□□ 1.42
CAPN1-206ENST00000526966 KIAA0825Q8IV33 1275 aa23.93■■□□□ 1.42
CAPN1-206ENST00000526966 TM4SF4P48230 202 aa23.92■■□□□ 1.42
CAPN1-206ENST00000526966 GTF2IP78347 998 aa23.92■■□□□ 1.42
CAPN1-206ENST00000526966 TTLL12Q14166 644 aaPredicted RBP23.92■■□□□ 1.42
CAPN1-206ENST00000526966 HDAC9Q9UKV0 1011 aa23.92■■□□□ 1.42
CAPN1-206ENST00000526966 VAMP4O75379 141 aa23.91■■□□□ 1.42
CAPN1-206ENST00000526966 C15orf52Q6ZUT6 534 aaKnown RBP23.91■■□□□ 1.42
CAPN1-206ENST00000526966 CD209Q9NNX6 404 aa23.91■■□□□ 1.42
CAPN1-206ENST00000526966 ANKRD18BA2A2Z9 1011 aa23.9■■□□□ 1.42
CAPN1-206ENST00000526966 KCNJ4P48050 445 aa23.9■■□□□ 1.42
CAPN1-206ENST00000526966 NOM1Q5C9Z4 860 aaKnown RBP23.9■■□□□ 1.42
CAPN1-206ENST00000526966 SOX10P56693 466 aa23.89■■□□□ 1.41
CAPN1-206ENST00000526966 FOXO4P98177 505 aa23.89■■□□□ 1.41
CAPN1-206ENST00000526966 SNAP23O00161 211 aa23.88■■□□□ 1.41
CAPN1-206ENST00000526966 TBC1D8O95759 1140 aa23.88■■□□□ 1.41
CAPN1-206ENST00000526966 PTPN12Q05209 780 aaKnown RBP23.88■■□□□ 1.41
CAPN1-206ENST00000526966 LDLRAD1Q5T700 205 aa23.88■■□□□ 1.41
CAPN1-206ENST00000526966 ARMC9Q7Z3E5 817 aa23.88■■□□□ 1.41
CAPN1-206ENST00000526966 WDR63Q8IWG1 891 aa23.88■■□□□ 1.41
CAPN1-206ENST00000526966 CERS5Q8N5B7 392 aa23.88■■□□□ 1.41
CAPN1-206ENST00000526966 MTMR14Q8NCE2 650 aa23.88■■□□□ 1.41
CAPN1-206ENST00000526966 ZNF296Q8WUU4 475 aaPredicted RBP23.88■■□□□ 1.41
CAPN1-206ENST00000526966 PKN2Q16513 984 aaKnown RBP23.87■■□□□ 1.41
CAPN1-206ENST00000526966 CFHR5Q9BXR6 569 aa23.87■■□□□ 1.41
CAPN1-206ENST00000526966 SSC5DA1L4H1 1573 aa23.86■■□□□ 1.41
CAPN1-206ENST00000526966 TAF5LO75529 589 aa23.86■■□□□ 1.41
CAPN1-206ENST00000526966 SREBF2Q12772 1141 aa23.86■■□□□ 1.41
CAPN1-206ENST00000526966 IFIT5Q13325 482 aaKnown RBP23.86■■□□□ 1.41
CAPN1-206ENST00000526966 BEND3Q5T5X7 828 aa23.86■■□□□ 1.41
CAPN1-206ENST00000526966 HPS5Q9UPZ3 1129 aa23.86■■□□□ 1.41
CAPN1-206ENST00000526966 IL1R1P14778 569 aa23.85■■□□□ 1.41
CAPN1-206ENST00000526966 EXOSC9Q06265 439 aaKnown RBP23.85■■□□□ 1.41
CAPN1-206ENST00000526966 MKRN3Q13064 507 aaKnown RBP23.85■■□□□ 1.41
CAPN1-206ENST00000526966 DLGAP5Q15398 846 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms