RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 SLC5A1P13866 664 aa20.35■□□□□ 0.85
CAPN1-205ENST00000526954 CENPQQ7L2Z9 268 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-205ENST00000526954 CLASRPQ8N2M8 674 aaKnown RBP20.35■□□□□ 0.85
CAPN1-205ENST00000526954 IL1RAPL2Q9NP60 686 aa20.35■□□□□ 0.85
CAPN1-205ENST00000526954 TIMM10P62072 90 aa20.34■□□□□ 0.85
CAPN1-205ENST00000526954 WASHC4Q2M389 1173 aa20.34■□□□□ 0.85
CAPN1-205ENST00000526954 ANKRD45Q5TZF3 282 aa20.34■□□□□ 0.85
CAPN1-205ENST00000526954 B4GALNT3Q6L9W6 998 aa20.34■□□□□ 0.85
CAPN1-205ENST00000526954 EAF2Q96CJ1 260 aaPredicted RBP20.34■□□□□ 0.85
CAPN1-205ENST00000526954 DICER1Q9UPY3 1922 aaKnown RBP20.33■□□□□ 0.85
CAPN1-205ENST00000526954 SMARCA5O60264 1052 aaPredicted RBP20.33■□□□□ 0.85
CAPN1-205ENST00000526954 NUCB1Q02818 461 aa20.33■□□□□ 0.85
CAPN1-205ENST00000526954 KIAA2012Q0VF49 1180 aa20.33■□□□□ 0.85
CAPN1-205ENST00000526954 KLRK1P26718 216 aa20.32■□□□□ 0.84
CAPN1-205ENST00000526954 AACSQ86V21 672 aa20.32■□□□□ 0.84
CAPN1-205ENST00000526954 TXNRD3Q86VQ6 643 aa20.32■□□□□ 0.84
CAPN1-205ENST00000526954 GPR101Q96P66 508 aaPredicted RBP20.32■□□□□ 0.84
CAPN1-205ENST00000526954 ZC3H12CQ9C0D7 883 aaKnown RBP20.32■□□□□ 0.84
CAPN1-205ENST00000526954 ZBTB47Q9UFB7 747 aaPredicted RBP20.32■□□□□ 0.84
CAPN1-205ENST00000526954 IARSP41252 1262 aaKnown RBP20.31■□□□□ 0.84
CAPN1-205ENST00000526954 RASSF7Q02833 373 aa20.31■□□□□ 0.84
CAPN1-205ENST00000526954 FBXO33Q7Z6M2 555 aa20.31■□□□□ 0.84
CAPN1-205ENST00000526954 XAGE2Q96GT9 111 aa20.31■□□□□ 0.84
CAPN1-205ENST00000526954 NEUROD6Q96NK8 337 aa20.31■□□□□ 0.84
CAPN1-205ENST00000526954 ZNF277Q9NRM2 450 aaPredicted RBP20.31■□□□□ 0.84
CAPN1-205ENST00000526954 CHD4Q14839 1912 aa20.3■□□□□ 0.84
CAPN1-205ENST00000526954 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
CAPN1-205ENST00000526954 RIMBP2O15034 1052 aa20.3■□□□□ 0.84
CAPN1-205ENST00000526954 PPIP5K2O43314 1243 aa20.3■□□□□ 0.84
CAPN1-205ENST00000526954 ADORA1P30542 326 aa20.3■□□□□ 0.84
CAPN1-205ENST00000526954 PRELPP51888 382 aa20.3■□□□□ 0.84
CAPN1-205ENST00000526954 AOC3Q16853 763 aa20.3■□□□□ 0.84
CAPN1-205ENST00000526954 CAVIN4Q5BKX8 364 aa20.3■□□□□ 0.84
CAPN1-205ENST00000526954 CHD1LQ86WJ1 897 aa20.3■□□□□ 0.84
CAPN1-205ENST00000526954 FAM84BQ96KN1 310 aaPredicted RBP20.3■□□□□ 0.84
CAPN1-205ENST00000526954 DBNLQ9UJU6 430 aaKnown RBP20.3■□□□□ 0.84
CAPN1-205ENST00000526954 ZBTB22O15209 634 aa20.29■□□□□ 0.84
CAPN1-205ENST00000526954 IFIT2P09913 472 aaKnown RBP20.29■□□□□ 0.84
CAPN1-205ENST00000526954 LMNB1P20700 586 aa20.29■□□□□ 0.84
CAPN1-205ENST00000526954 DBNDD2Q9BQY9 259 aa20.29■□□□□ 0.84
CAPN1-205ENST00000526954 COA1Q9GZY4 146 aa20.29■□□□□ 0.84
CAPN1-205ENST00000526954 CCDC8Q9H0W5 538 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-205ENST00000526954 HIBADHP31937 336 aaKnown RBP20.28■□□□□ 0.84
CAPN1-205ENST00000526954 GYG1P46976 350 aa20.28■□□□□ 0.84
CAPN1-205ENST00000526954 ZNF804AQ7Z570 1209 aa20.28■□□□□ 0.84
CAPN1-205ENST00000526954 LARGE2Q8N3Y3 721 aa20.28■□□□□ 0.84
CAPN1-205ENST00000526954 TLR7Q9NYK1 1049 aaKnown RBP20.28■□□□□ 0.84
CAPN1-205ENST00000526954 GTF3C3Q9Y5Q9 886 aa20.28■□□□□ 0.84
CAPN1-205ENST00000526954 COL4A5P29400 1685 aa20.28■□□□□ 0.84
CAPN1-205ENST00000526954 BCAMP50895 628 aa20.27■□□□□ 0.84
CAPN1-205ENST00000526954 CCDC102BQ68D86 513 aa20.27■□□□□ 0.84
CAPN1-205ENST00000526954 LNPKQ9C0E8 428 aa20.27■□□□□ 0.84
CAPN1-205ENST00000526954 CD209Q9NNX6 404 aa20.27■□□□□ 0.84
CAPN1-205ENST00000526954 IL1R1P14778 569 aa20.26■□□□□ 0.83
CAPN1-205ENST00000526954 PODNQ7Z5L7 613 aa20.26■□□□□ 0.83
CAPN1-205ENST00000526954 VPS37DQ86XT2 251 aa20.26■□□□□ 0.83
CAPN1-205ENST00000526954 C16orf71Q8IYS4 520 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-205ENST00000526954 ZNF512BQ96KM6 892 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-205ENST00000526954 SALL3Q9BXA9 1300 aa20.26■□□□□ 0.83
CAPN1-205ENST00000526954 MYH13Q9UKX3 1938 aa20.25■□□□□ 0.83
CAPN1-205ENST00000526954 PHKA1P46020 1223 aa20.25■□□□□ 0.83
CAPN1-205ENST00000526954 DOK7Q18PE1 504 aa20.25■□□□□ 0.83
CAPN1-205ENST00000526954 CCDC158Q5M9N0 1113 aa20.25■□□□□ 0.83
CAPN1-205ENST00000526954 GORABQ5T7V8 394 aa20.25■□□□□ 0.83
CAPN1-205ENST00000526954 TDRD7Q8NHU6 1098 aaKnown RBP20.25■□□□□ 0.83
CAPN1-205ENST00000526954 JDP2Q8WYK2 163 aa20.25■□□□□ 0.83
CAPN1-205ENST00000526954 GNL3LQ9NVN8 582 aaKnown RBP20.25■□□□□ 0.83
CAPN1-205ENST00000526954 PSME4Q14997 1843 aa20.25■□□□□ 0.83
CAPN1-205ENST00000526954 G3V3G9 751 aa20.24■□□□□ 0.83
CAPN1-205ENST00000526954 ECE2O60344 883 aa20.24■□□□□ 0.83
CAPN1-205ENST00000526954 ARID4AP29374 1257 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-205ENST00000526954 DCAF8Q5TAQ9 597 aa20.24■□□□□ 0.83
CAPN1-205ENST00000526954 NIM1KQ8IY84 436 aa20.24■□□□□ 0.83
CAPN1-205ENST00000526954 DBNDD1Q9H9R9 158 aa20.24■□□□□ 0.83
CAPN1-205ENST00000526954 SCN9AQ15858 1988 aa20.24■□□□□ 0.83
CAPN1-205ENST00000526954 AKAP11Q9UKA4 1901 aa20.23■□□□□ 0.83
CAPN1-205ENST00000526954 SEMA3EO15041 775 aa20.23■□□□□ 0.83
CAPN1-205ENST00000526954 UQCRFS1P1P0C7P4 283 aa20.23■□□□□ 0.83
CAPN1-205ENST00000526954 OTUD7AQ8TE49 926 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-205ENST00000526954 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
CAPN1-205ENST00000526954 ZNRF3Q9ULT6 936 aa20.23■□□□□ 0.83
CAPN1-205ENST00000526954 TIAM2Q8IVF5 1701 aa20.22■□□□□ 0.83
CAPN1-205ENST00000526954 YDJCA8MPS7 323 aa20.22■□□□□ 0.83
CAPN1-205ENST00000526954 FZD9O00144 591 aa20.22■□□□□ 0.83
CAPN1-205ENST00000526954 TTC39AQ5SRH9 613 aa20.22■□□□□ 0.83
CAPN1-205ENST00000526954 C9orf131Q5VYM1 1079 aa20.22■□□□□ 0.83
CAPN1-205ENST00000526954 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.22■□□□□ 0.83
CAPN1-205ENST00000526954 ECHDC1Q9NTX5 307 aa20.22■□□□□ 0.83
CAPN1-205ENST00000526954 RNF181Q9P0P0 153 aa20.22■□□□□ 0.83
CAPN1-205ENST00000526954 STAP2Q9UGK3 403 aa20.22■□□□□ 0.83
CAPN1-205ENST00000526954 ZNF646O15015 1829 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-205ENST00000526954 TTC41PQ6P2S7 1318 aa20.22■□□□□ 0.83
CAPN1-205ENST00000526954 ATP5JP18859 108 aa20.21■□□□□ 0.83
CAPN1-205ENST00000526954 MX1P20591 662 aa20.21■□□□□ 0.83
CAPN1-205ENST00000526954 PDE4AP27815 886 aa20.21■□□□□ 0.83
CAPN1-205ENST00000526954 GPATCH3Q96I76 525 aa20.21■□□□□ 0.83
CAPN1-205ENST00000526954 PDS5AQ29RF7 1337 aaKnown RBP20.21■□□□□ 0.83
CAPN1-205ENST00000526954 UTRNP46939 3433 aa20.21■□□□□ 0.83
CAPN1-205ENST00000526954 PDE1AP54750 535 aa20.2■□□□□ 0.82
CAPN1-205ENST00000526954 PLEKHM2Q8IWE5 1019 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms