RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 FGFR2P21802 821 aa16.02■□□□□ 0.16
SMPD1-202ENST00000526280 EIF6P56537 245 aaKnown RBP16.02■□□□□ 0.16
SMPD1-202ENST00000526280 AAMPQ13685 434 aa16.02■□□□□ 0.16
SMPD1-202ENST00000526280 PUM3Q15397 648 aaKnown RBP16.02■□□□□ 0.16
SMPD1-202ENST00000526280 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
SMPD1-202ENST00000526280 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.16
SMPD1-202ENST00000526280 SASH1O94885 1247 aa16.01■□□□□ 0.15
SMPD1-202ENST00000526280 CXCL9Q07325 125 aa16.01■□□□□ 0.15
SMPD1-202ENST00000526280 TFCP2Q12800 502 aa16.01■□□□□ 0.15
SMPD1-202ENST00000526280 PODNQ7Z5L7 613 aa16.01■□□□□ 0.15
SMPD1-202ENST00000526280 COA1Q9GZY4 146 aa16.01■□□□□ 0.15
SMPD1-202ENST00000526280 PCDHB15Q9Y5E8 787 aa16.01■□□□□ 0.15
SMPD1-202ENST00000526280 DDNO94850 711 aaPredicted RBP16■□□□□ 0.15
SMPD1-202ENST00000526280 EXOC6Q8TAG9 804 aa16■□□□□ 0.15
SMPD1-202ENST00000526280 LPIN2Q92539 896 aa16■□□□□ 0.15
SMPD1-202ENST00000526280 FAM84BQ96KN1 310 aaPredicted RBP16■□□□□ 0.15
SMPD1-202ENST00000526280 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
SMPD1-202ENST00000526280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16■□□□□ 0.15
SMPD1-202ENST00000526280 RAD17O75943 681 aa15.99■□□□□ 0.15
SMPD1-202ENST00000526280 IFIT1P09914 478 aaKnown RBP15.99■□□□□ 0.15
SMPD1-202ENST00000526280 SLC5A1P13866 664 aa15.99■□□□□ 0.15
SMPD1-202ENST00000526280 OS9Q13438 667 aaPredicted RBP15.99■□□□□ 0.15
SMPD1-202ENST00000526280 ATP2B3Q16720 1220 aa15.99■□□□□ 0.15
SMPD1-202ENST00000526280 ZNF804AQ7Z570 1209 aa15.99■□□□□ 0.15
SMPD1-202ENST00000526280 GPC2Q8N158 579 aa15.99■□□□□ 0.15
SMPD1-202ENST00000526280 GPBP1L1Q9HC44 474 aaPredicted RBP15.99■□□□□ 0.15
SMPD1-202ENST00000526280 CD209Q9NNX6 404 aa15.99■□□□□ 0.15
SMPD1-202ENST00000526280 AKAP2Q9Y2D5 859 aa15.99■□□□□ 0.15
SMPD1-202ENST00000526280 KDM2BQ8NHM5 1336 aa15.99■□□□□ 0.15
SMPD1-202ENST00000526280 HIBADHP31937 336 aaKnown RBP15.98■□□□□ 0.15
SMPD1-202ENST00000526280 GYG1P46976 350 aa15.98■□□□□ 0.15
SMPD1-202ENST00000526280 TNIP1Q15025 636 aa15.98■□□□□ 0.15
SMPD1-202ENST00000526280 HSP90AB4PQ58FF6 505 aa15.98■□□□□ 0.15
SMPD1-202ENST00000526280 CIAPIN1Q6FI81 312 aa15.98■□□□□ 0.15
SMPD1-202ENST00000526280 FBXO33Q7Z6M2 555 aa15.98■□□□□ 0.15
SMPD1-202ENST00000526280 EXOC6BQ9Y2D4 811 aa15.98■□□□□ 0.15
SMPD1-202ENST00000526280 SCN9AQ15858 1988 aa15.98■□□□□ 0.15
SMPD1-202ENST00000526280 IL1R1P14778 569 aa15.97■□□□□ 0.15
SMPD1-202ENST00000526280 TIMM10P62072 90 aa15.97■□□□□ 0.15
SMPD1-202ENST00000526280 IRX6P78412 446 aaPredicted RBP15.97■□□□□ 0.15
SMPD1-202ENST00000526280 CAVIN4Q5BKX8 364 aa15.97■□□□□ 0.15
SMPD1-202ENST00000526280 ERC1Q8IUD2 1116 aa15.97■□□□□ 0.15
SMPD1-202ENST00000526280 L3MBTL3Q96JM7 780 aaPredicted RBP15.97■□□□□ 0.15
SMPD1-202ENST00000526280 GPR108Q9NPR9 543 aa15.97■□□□□ 0.15
SMPD1-202ENST00000526280 GJA3Q9Y6H8 435 aa15.97■□□□□ 0.15
SMPD1-202ENST00000526280 USP17L3A6NCW0 530 aa15.96■□□□□ 0.15
SMPD1-202ENST00000526280 USP17L4A6NCW7 530 aa15.96■□□□□ 0.15
SMPD1-202ENST00000526280 PSMD14O00487 310 aa15.96■□□□□ 0.15
SMPD1-202ENST00000526280 VIL1P09327 827 aaKnown RBP15.96■□□□□ 0.15
SMPD1-202ENST00000526280 BCAMP50895 628 aa15.96■□□□□ 0.15
SMPD1-202ENST00000526280 USP17L1Q7RTZ2 530 aa15.96■□□□□ 0.15
SMPD1-202ENST00000526280 A0A1B0GUL7 405 aa15.95■□□□□ 0.14
SMPD1-202ENST00000526280 POTECB2RU33 542 aa15.95■□□□□ 0.14
SMPD1-202ENST00000526280 RAB11FIP3O75154 756 aa15.95■□□□□ 0.14
SMPD1-202ENST00000526280 C1QTNF8P60827 252 aa15.95■□□□□ 0.14
SMPD1-202ENST00000526280 VPS37DQ86XT2 251 aa15.95■□□□□ 0.14
SMPD1-202ENST00000526280 TDRD7Q8NHU6 1098 aaKnown RBP15.95■□□□□ 0.14
SMPD1-202ENST00000526280 DCTPP1Q9H773 170 aa15.95■□□□□ 0.14
SMPD1-202ENST00000526280 RRAGCQ9HB90 399 aa15.95■□□□□ 0.14
SMPD1-202ENST00000526280 NMRK2Q9NPI5 230 aa15.95■□□□□ 0.14
SMPD1-202ENST00000526280 WDR90Q96KV7 1748 aa15.95■□□□□ 0.14
SMPD1-202ENST00000526280 ADORA1P30542 326 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 TNNI3KQ59H18 835 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 STRIP1Q5VSL9 837 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 TTLL5Q6EMB2 1281 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 RHPN1Q8TCX5 695 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 XAGE2Q96GT9 111 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 NEUROD6Q96NK8 337 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 FPGT-TNNI3KV9GXZ4 949 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 PSME4Q14997 1843 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 ZNF609O15014 1411 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 VEGFAP15692 232 aaPredicted RBP15.94■□□□□ 0.14
SMPD1-202ENST00000526280 GTF2IP78347 998 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 DACT2Q5SW24 774 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 KIF1BPQ96EK5 621 aa15.94■□□□□ 0.14
SMPD1-202ENST00000526280 RPS12P25398 132 aaKnown RBP15.93■□□□□ 0.14
SMPD1-202ENST00000526280 GMPSP49915 693 aaPredicted RBP15.93■□□□□ 0.14
SMPD1-202ENST00000526280 SCNN1DP51172 638 aa15.93■□□□□ 0.14
SMPD1-202ENST00000526280 HDAC1Q13547 482 aaPredicted RBP15.93■□□□□ 0.14
SMPD1-202ENST00000526280 RSBN1LQ6PCB5 846 aaPredicted RBP15.93■□□□□ 0.14
SMPD1-202ENST00000526280 DPF2Q92785 391 aa15.93■□□□□ 0.14
SMPD1-202ENST00000526280 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
SMPD1-202ENST00000526280 ARAP2Q8WZ64 1704 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 FAM205AQ6ZU69 1335 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 IQCA1LA6NCM1 817 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 APBB1O00213 710 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 KIF3CO14782 793 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 ZBTB22O15209 634 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 PHKA1P46020 1223 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 CCDC102BQ68D86 513 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 AGBL3Q8NEM8 1001 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 FBXW7Q969H0 707 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 EAF2Q96CJ1 260 aaPredicted RBP15.92■□□□□ 0.14
SMPD1-202ENST00000526280 GMLQ99445 158 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 GNL3LQ9NVN8 582 aaKnown RBP15.92■□□□□ 0.14
SMPD1-202ENST00000526280 GPRC5DQ9NZD1 345 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 HACL1Q9UJ83 578 aa15.92■□□□□ 0.14
SMPD1-202ENST00000526280 IQSEC3Q9UPP2 1182 aaPredicted RBP15.92■□□□□ 0.14
SMPD1-202ENST00000526280 FRAT2O75474 233 aaPredicted RBP15.91■□□□□ 0.14
SMPD1-202ENST00000526280 LMOD1P29536 600 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms