RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 PODNQ7Z5L7 613 aa12.32□□□□□ -0.44
TRAPPC4-206ENST00000525303 CDC5LQ99459 802 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-206ENST00000525303 PITPNM2Q9BZ72 1349 aa12.32□□□□□ -0.44
TRAPPC4-206ENST00000525303 MED23Q9ULK4 1368 aa12.31□□□□□ -0.44
TRAPPC4-206ENST00000525303 LAMB1P07942 1786 aa12.31□□□□□ -0.44
TRAPPC4-206ENST00000525303 IGKV5-2P06315 115 aa12.31□□□□□ -0.44
TRAPPC4-206ENST00000525303 FKBP1BP68106 108 aa12.31□□□□□ -0.44
TRAPPC4-206ENST00000525303 MOB2Q70IA6 237 aa12.31□□□□□ -0.44
TRAPPC4-206ENST00000525303 GREM2Q9H772 168 aa12.31□□□□□ -0.44
TRAPPC4-206ENST00000525303 MINPP1Q9UNW1 487 aa12.31□□□□□ -0.44
TRAPPC4-206ENST00000525303 PI4KAP2A4QPH2 592 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 SOX10P56693 466 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 PRAMEF18Q5VWM3 479 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 KSR2Q6VAB6 950 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 REM2Q8IYK8 340 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 PI4KAP1Q8N8J0 262 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 TTLL11Q8NHH1 800 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 CHMP4AQ9BY43 222 aa12.3□□□□□ -0.44
TRAPPC4-206ENST00000525303 CCT4P50991 539 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-206ENST00000525303 NEXNQ0ZGT2 675 aa12.29□□□□□ -0.44
TRAPPC4-206ENST00000525303 CWF19L2Q2TBE0 894 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-206ENST00000525303 DACT2Q5SW24 774 aa12.29□□□□□ -0.44
TRAPPC4-206ENST00000525303 CTU1Q7Z7A3 348 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-206ENST00000525303 BSDC1Q9NW68 430 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-206ENST00000525303 UBE2Q2LH0YL09 131 aa12.28□□□□□ -0.44
TRAPPC4-206ENST00000525303 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-206ENST00000525303 OGFOD1Q8N543 542 aa12.28□□□□□ -0.44
TRAPPC4-206ENST00000525303 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-206ENST00000525303 NEURL1BA8MQ27 555 aa12.27□□□□□ -0.45
TRAPPC4-206ENST00000525303 WNT10BO00744 389 aa12.27□□□□□ -0.45
TRAPPC4-206ENST00000525303 STRIP1Q5VSL9 837 aa12.27□□□□□ -0.45
TRAPPC4-206ENST00000525303 UBE3BQ7Z3V4 1068 aa12.27□□□□□ -0.45
TRAPPC4-206ENST00000525303 TXNRD3Q86VQ6 643 aa12.27□□□□□ -0.45
TRAPPC4-206ENST00000525303 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
TRAPPC4-206ENST00000525303 COA1Q9GZY4 146 aa12.27□□□□□ -0.45
TRAPPC4-206ENST00000525303 MYO3BQ8WXR4 1341 aa12.27□□□□□ -0.45
TRAPPC4-206ENST00000525303 SASH1O94885 1247 aa12.26□□□□□ -0.45
TRAPPC4-206ENST00000525303 TBC1D8O95759 1140 aa12.26□□□□□ -0.45
TRAPPC4-206ENST00000525303 KLRK1P26718 216 aa12.26□□□□□ -0.45
TRAPPC4-206ENST00000525303 IGHMBP2P38935 993 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-206ENST00000525303 G2E3Q7L622 706 aa12.26□□□□□ -0.45
TRAPPC4-206ENST00000525303 HDAC9Q9UKV0 1011 aa12.26□□□□□ -0.45
TRAPPC4-206ENST00000525303 LEMD3Q9Y2U8 911 aa12.26□□□□□ -0.45
TRAPPC4-206ENST00000525303 CENPFP49454 3210 aa12.26□□□□□ -0.45
TRAPPC4-206ENST00000525303 OTOFQ9HC10 1997 aa12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 H7C1W4 665 aa12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 ITGA6P23229 1130 aa12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 NF2P35240 595 aa12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 TTLL5Q6EMB2 1281 aa12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 ZNF296Q8WUU4 475 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 HPS5Q9UPZ3 1129 aa12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 ZNF804BA4D1E1 1349 aa12.25□□□□□ -0.45
TRAPPC4-206ENST00000525303 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
TRAPPC4-206ENST00000525303 TM4SF4P48230 202 aa12.24□□□□□ -0.45
TRAPPC4-206ENST00000525303 PRKG1Q13976 671 aa12.24□□□□□ -0.45
TRAPPC4-206ENST00000525303 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-206ENST00000525303 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
TRAPPC4-206ENST00000525303 ARAP2Q8WZ64 1704 aa12.24□□□□□ -0.45
TRAPPC4-206ENST00000525303 MPHOSPH8Q99549 860 aa12.24□□□□□ -0.45
TRAPPC4-206ENST00000525303 ANKRD2Q9GZV1 360 aa12.24□□□□□ -0.45
TRAPPC4-206ENST00000525303 MRS2Q9HD23 443 aa12.24□□□□□ -0.45
TRAPPC4-206ENST00000525303 MMP14P50281 582 aa12.23□□□□□ -0.45
TRAPPC4-206ENST00000525303 GTF2IP78347 998 aa12.23□□□□□ -0.45
TRAPPC4-206ENST00000525303 PTPN12Q05209 780 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-206ENST00000525303 GCKRQ14397 625 aa12.23□□□□□ -0.45
TRAPPC4-206ENST00000525303 PKN2Q16513 984 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-206ENST00000525303 APOBEC3FQ8IUX4 373 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-206ENST00000525303 PLA2G12BQ9BX93 195 aa12.23□□□□□ -0.45
TRAPPC4-206ENST00000525303 COL1A1P02452 1464 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 GPR25O00155 361 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 KCNJ4P48050 445 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 CASP7P55210 303 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 CHRNDQ07001 517 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 FLIIQ13045 1269 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 CCDC27Q2M243 656 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 ARMC9Q7Z3E5 817 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 ZBED3Q96IU2 234 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 FZD1Q9UP38 647 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 HTTP42858 3142 aa12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 RBBP6Q7Z6E9 1792 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 KIAA0100Q14667 2235 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-206ENST00000525303 SNAP23O00161 211 aa12.21□□□□□ -0.45
TRAPPC4-206ENST00000525303 CSF1RP07333 972 aa12.21□□□□□ -0.45
TRAPPC4-206ENST00000525303 FKBP5Q13451 457 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-206ENST00000525303 CCDC184Q52MB2 194 aa12.21□□□□□ -0.45
TRAPPC4-206ENST00000525303 DNAAF4Q8WXU2 420 aa12.21□□□□□ -0.45
TRAPPC4-206ENST00000525303 MYH16Q9H6N6 1097 aa12.21□□□□□ -0.45
TRAPPC4-206ENST00000525303 CD209Q9NNX6 404 aa12.21□□□□□ -0.45
TRAPPC4-206ENST00000525303 ANGEL1Q9UNK9 670 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-206ENST00000525303 MKI67P46013 3256 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-206ENST00000525303 MYH13Q9UKX3 1938 aa12.21□□□□□ -0.46
TRAPPC4-206ENST00000525303 BRCA2P51587 3418 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms