RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PPME1Q9Y570 386 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 U2AF2P26368 475 aaKnown RBP eCLIP15.45■□□□□ 0.06
LRRK1-202ENST00000525284 CCDC89Q8N998 374 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 CCDC42Q96M95 316 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 IMPG2Q9BZV3 1241 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 FGD6Q6ZV73 1430 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 WDR46O15213 610 aaKnown RBP15.45■□□□□ 0.06
LRRK1-202ENST00000525284 INPP1P49441 399 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 TBC1D2Q9BYX2 928 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 AFG3L2Q9Y4W6 797 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 CCDC62Q6P9F0 684 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 PRDM2Q13029 1718 aa15.45■□□□□ 0.06
LRRK1-202ENST00000525284 GAS8O95995 478 aa15.44■□□□□ 0.06
LRRK1-202ENST00000525284 NBPF8Q3BBV2 869 aa15.44■□□□□ 0.06
LRRK1-202ENST00000525284 VSIG1Q86XK7 387 aa15.44■□□□□ 0.06
LRRK1-202ENST00000525284 STAC3Q96MF2 364 aa15.44■□□□□ 0.06
LRRK1-202ENST00000525284 KAT14Q9H8E8 782 aa15.44■□□□□ 0.06
LRRK1-202ENST00000525284 OGFRQ9NZT2 677 aa15.44■□□□□ 0.06
LRRK1-202ENST00000525284 TACO1Q9BSH4 297 aaKnown RBP15.44■□□□□ 0.06
LRRK1-202ENST00000525284 ATP5DP30049 168 aa15.44■□□□□ 0.06
LRRK1-202ENST00000525284 METAP2P50579 478 aaKnown RBP eCLIP15.44■□□□□ 0.06
LRRK1-202ENST00000525284 TNNC1P63316 161 aa15.44■□□□□ 0.06
LRRK1-202ENST00000525284 TPX2Q9ULW0 747 aaKnown RBP15.44■□□□□ 0.06
LRRK1-202ENST00000525284 CETN3O15182 167 aa15.43■□□□□ 0.06
LRRK1-202ENST00000525284 ZNF365Q70YC5 407 aa15.43■□□□□ 0.06
LRRK1-202ENST00000525284 HAND2P61296 217 aa15.43■□□□□ 0.06
LRRK1-202ENST00000525284 ATP2B3Q16720 1220 aa15.43■□□□□ 0.06
LRRK1-202ENST00000525284 RNF10Q8N5U6 811 aaKnown RBP15.43■□□□□ 0.06
LRRK1-202ENST00000525284 E7EVH7 732 aa15.43■□□□□ 0.06
LRRK1-202ENST00000525284 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.43■□□□□ 0.06
LRRK1-202ENST00000525284 CAVIN2O95810 425 aa15.43■□□□□ 0.06
LRRK1-202ENST00000525284 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
LRRK1-202ENST00000525284 PPANQ9NQ55 473 aaKnown RBP15.43■□□□□ 0.06
LRRK1-202ENST00000525284 SKAP1Q86WV1 359 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 PROCA1Q8NCQ7 364 aaPredicted RBP15.42■□□□□ 0.06
LRRK1-202ENST00000525284 ERMNQ8TAM6 284 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 TSPY2A6NKD2 308 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 TRIM68Q6AZZ1 485 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 MICAL1Q8TDZ2 1067 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 DNAJC25Q9H1X3 360 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 PPP2R5DQ14738 602 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 MTUS1Q9ULD2 1270 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 USH1CQ9Y6N9 552 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 GIGYF1O75420 1035 aaPredicted RBP15.42■□□□□ 0.06
LRRK1-202ENST00000525284 MX2P20592 715 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 ASIC1P78348 528 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 UBXN1Q04323 297 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 CLSTN2Q9H4D0 955 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 SEL1L2Q5TEA6 688 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 MIS18AQ9NYP9 233 aa15.42■□□□□ 0.06
LRRK1-202ENST00000525284 GPR161Q8N6U8 529 aaKnown RBP15.41■□□□□ 0.06
LRRK1-202ENST00000525284 VCX3AQ9NNX9 186 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 GIPC1O14908 333 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 OPHN1O60890 802 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 MAP2K2P36507 400 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 LEO1Q8WVC0 666 aaPredicted RBP15.41■□□□□ 0.06
LRRK1-202ENST00000525284 TBC1D31Q96DN5 1066 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 DDX21Q9NR30 783 aaKnown RBP eCLIP15.41■□□□□ 0.06
LRRK1-202ENST00000525284 STK38LQ9Y2H1 464 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 PSMA7O14818 248 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 FAF1Q9UNN5 650 aaPredicted RBP15.41■□□□□ 0.06
LRRK1-202ENST00000525284 VPS41P49754 854 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 MYD88Q99836 296 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 FAM204AQ9H8W3 233 aa15.41■□□□□ 0.06
LRRK1-202ENST00000525284 PPP2R3AQ06190 1150 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 TRPC3Q13507 836 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 NEK11Q8NG66 645 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 KIFC2Q96AC6 838 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 AGTPBP1Q9UPW5 1226 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 CLCN1P35523 988 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 ITIH3Q06033 890 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 SPAG1Q07617 926 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 BAIAP2L1Q9UHR4 511 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 SLC5A1P13866 664 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 TAF12Q16514 161 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 LMOD1P29536 600 aaPredicted RBP15.4■□□□□ 0.06
LRRK1-202ENST00000525284 CNPY2Q9Y2B0 182 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 ARHGAP24Q8N264 748 aa15.4■□□□□ 0.06
LRRK1-202ENST00000525284 MRPL46Q9H2W6 279 aaKnown RBP15.4■□□□□ 0.06
LRRK1-202ENST00000525284 PEX19P40855 299 aa15.39■□□□□ 0.05
LRRK1-202ENST00000525284 RNASE9P60153 205 aaKnown RBP15.39■□□□□ 0.05
LRRK1-202ENST00000525284 MUM1Q2TAK8 710 aa15.39■□□□□ 0.05
LRRK1-202ENST00000525284 NCAPGQ9BPX3 1015 aa15.39■□□□□ 0.05
LRRK1-202ENST00000525284 ATICP31939 592 aa15.39■□□□□ 0.05
LRRK1-202ENST00000525284 ZBTB17Q13105 803 aa15.39■□□□□ 0.05
LRRK1-202ENST00000525284 CACYBPQ9HB71 228 aaKnown RBP15.39■□□□□ 0.05
LRRK1-202ENST00000525284 AFAP1L2Q8N4X5 818 aa15.39■□□□□ 0.05
LRRK1-202ENST00000525284 CCDC26Q8TAB7 109 aa15.39■□□□□ 0.05
LRRK1-202ENST00000525284 PFDN1O60925 122 aa15.39■□□□□ 0.05
LRRK1-202ENST00000525284 KLHL40Q2TBA0 621 aa15.39■□□□□ 0.05
LRRK1-202ENST00000525284 MARCKSP29966 332 aaPredicted RBP15.39■□□□□ 0.05
LRRK1-202ENST00000525284 PLS1Q14651 629 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 HVCN1Q96D96 273 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 NBPF7P0C2Y1 421 aaPredicted RBP15.38■□□□□ 0.05
LRRK1-202ENST00000525284 STX17P56962 302 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 MFSD6Q6ZSS7 791 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 DHX58Q96C10 678 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 GOLGA6CA6NDK9 693 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 GOLGA6DP0CG33 693 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 RAPGEF1Q13905 1077 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms