RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 GIGYF1O75420 1035 aaPredicted RBP19.75■□□□□ 0.75
BEST1-203ENST00000524877 HOMER1Q86YM7 354 aa19.75■□□□□ 0.75
BEST1-203ENST00000524877 NUCB1Q02818 461 aa19.75■□□□□ 0.75
BEST1-203ENST00000524877 CEP85Q6P2H3 762 aa19.75■□□□□ 0.75
BEST1-203ENST00000524877 PDILTQ8N807 584 aa19.75■□□□□ 0.75
BEST1-203ENST00000524877 IGSF1Q8N6C5 1336 aa19.74■□□□□ 0.75
BEST1-203ENST00000524877 CCDC144CPQ8IYA2 1237 aa19.74■□□□□ 0.75
BEST1-203ENST00000524877 PAF1Q8N7H5 531 aa19.74■□□□□ 0.75
BEST1-203ENST00000524877 OVOS2A0A0G2JMS6 1433 aa19.74■□□□□ 0.75
BEST1-203ENST00000524877 OVOS2A0A0J9YW53 1432 aa19.74■□□□□ 0.75
BEST1-203ENST00000524877 OVOS2Q6IE36 1432 aa19.74■□□□□ 0.75
BEST1-203ENST00000524877 IL17REQ8NFR9 667 aa19.74■□□□□ 0.75
BEST1-203ENST00000524877 USP16Q9Y5T5 823 aa19.74■□□□□ 0.75
BEST1-203ENST00000524877 ABCA6Q8N139 1617 aa19.74■□□□□ 0.75
BEST1-203ENST00000524877 SPDYE4A6NLX3 237 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 MICU3Q86XE3 530 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 SMARCE1Q969G3 411 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 ZC3H13Q5T200 1668 aaKnown RBP19.73■□□□□ 0.75
BEST1-203ENST00000524877 RTL9Q8NET4 1388 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 PPEF1O14829 653 aaPredicted RBP19.73■□□□□ 0.75
BEST1-203ENST00000524877 TRIM35Q9UPQ4 493 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 SAMM50Q9Y512 469 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 A0A1B0GUL7 405 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 PPP1R12BO60237 982 aaPredicted RBP19.73■□□□□ 0.75
BEST1-203ENST00000524877 SMC2O95347 1197 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 TULP4Q9NRJ4 1543 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 SERPINB2P05120 415 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 CCDC148Q8NFR7 591 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 ARHGEF10LQ9HCE6 1279 aa19.73■□□□□ 0.75
BEST1-203ENST00000524877 PALLDQ8WX93 1383 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 CALM1P0DP23 149 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 CALM2P0DP24 149 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 CALM3P0DP25 149 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 PDE1AP54750 535 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 TNFAIP1Q13829 316 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 BMP2KLQ5H9B9 411 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 TAF5LO75529 589 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 CCT2P78371 535 aaKnown RBP19.72■□□□□ 0.75
BEST1-203ENST00000524877 TMC4Q7Z404 712 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 PRPF40AO75400 957 aaKnown RBP19.72■□□□□ 0.75
BEST1-203ENST00000524877 SMARCC2Q8TAQ2 1214 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 SAP30BPQ9UHR5 308 aaKnown RBP19.72■□□□□ 0.75
BEST1-203ENST00000524877 XAGE2Q96GT9 111 aa19.72■□□□□ 0.75
BEST1-203ENST00000524877 UPF3BQ9BZI7 483 aaKnown RBP19.72■□□□□ 0.75
BEST1-203ENST00000524877 DCPSQ96C86 337 aaKnown RBP19.71■□□□□ 0.75
BEST1-203ENST00000524877 LIMCH1Q9UPQ0 1083 aa19.71■□□□□ 0.75
BEST1-203ENST00000524877 H0YHG0 523 aa19.71■□□□□ 0.75
BEST1-203ENST00000524877 ARGLU1Q9NWB6 273 aaPredicted RBP19.71■□□□□ 0.75
BEST1-203ENST00000524877 INO80Q9ULG1 1556 aaPredicted RBP19.71■□□□□ 0.75
BEST1-203ENST00000524877 ZNF594Q96JF6 807 aaPredicted RBP19.71■□□□□ 0.75
BEST1-203ENST00000524877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.7■□□□□ 0.74
BEST1-203ENST00000524877 DESP17661 470 aa19.7■□□□□ 0.74
BEST1-203ENST00000524877 ZBTB38Q8NAP3 1195 aaPredicted RBP19.7■□□□□ 0.74
BEST1-203ENST00000524877 SLC26A6Q9BXS9 759 aa19.7■□□□□ 0.74
BEST1-203ENST00000524877 KDRP35968 1356 aa19.7■□□□□ 0.74
BEST1-203ENST00000524877 TNNI3KQ59H18 835 aa19.7■□□□□ 0.74
BEST1-203ENST00000524877 FPGT-TNNI3KV9GXZ4 949 aa19.7■□□□□ 0.74
BEST1-203ENST00000524877 DALRD3Q5D0E6 543 aaKnown RBP19.7■□□□□ 0.74
BEST1-203ENST00000524877 BRPF1P55201 1214 aaPredicted RBP19.7■□□□□ 0.74
BEST1-203ENST00000524877 RAB3GAP1Q15042 981 aa19.7■□□□□ 0.74
BEST1-203ENST00000524877 NEURL1BA8MQ27 555 aa19.69■□□□□ 0.74
BEST1-203ENST00000524877 KCNQ3O43525 872 aa19.69■□□□□ 0.74
BEST1-203ENST00000524877 MRE11P49959 708 aa19.69■□□□□ 0.74
BEST1-203ENST00000524877 SUCLG2Q96I99 432 aa19.69■□□□□ 0.74
BEST1-203ENST00000524877 TNMDQ9H2S6 317 aa19.69■□□□□ 0.74
BEST1-203ENST00000524877 NMIQ13287 307 aaPredicted RBP19.69■□□□□ 0.74
BEST1-203ENST00000524877 RRP36Q96EU6 259 aaKnown RBP19.69■□□□□ 0.74
BEST1-203ENST00000524877 ZBTB43O43298 467 aa19.69■□□□□ 0.74
BEST1-203ENST00000524877 C1orf167Q5SNV9 1468 aa19.69■□□□□ 0.74
BEST1-203ENST00000524877 SLC27A3Q5K4L6 730 aa19.69■□□□□ 0.74
BEST1-203ENST00000524877 CCAR2Q8N163 923 aaKnown RBP19.69■□□□□ 0.74
BEST1-203ENST00000524877 PTCH1Q13635 1447 aa19.68■□□□□ 0.74
BEST1-203ENST00000524877 RTN1Q16799 776 aa19.68■□□□□ 0.74
BEST1-203ENST00000524877 MBD4O95243 580 aa19.68■□□□□ 0.74
BEST1-203ENST00000524877 HOMEZQ8IX15 550 aa19.68■□□□□ 0.74
BEST1-203ENST00000524877 CALML4Q96GE6 196 aa19.68■□□□□ 0.74
BEST1-203ENST00000524877 CEP170BQ9Y4F5 1589 aaPredicted RBP19.68■□□□□ 0.74
BEST1-203ENST00000524877 TSG101Q99816 390 aa19.68■□□□□ 0.74
BEST1-203ENST00000524877 PCCAP05165 728 aaPredicted RBP19.68■□□□□ 0.74
BEST1-203ENST00000524877 HEATR3Q7Z4Q2 680 aa19.68■□□□□ 0.74
BEST1-203ENST00000524877 ZNF592Q92610 1267 aa19.68■□□□□ 0.74
BEST1-203ENST00000524877 TTLL7Q6ZT98 887 aa19.67■□□□□ 0.74
BEST1-203ENST00000524877 HELLSQ9NRZ9 838 aa19.67■□□□□ 0.74
BEST1-203ENST00000524877 ZNHIT6Q9NWK9 470 aaKnown RBP19.67■□□□□ 0.74
BEST1-203ENST00000524877 VPS72Q15906 364 aa19.67■□□□□ 0.74
BEST1-203ENST00000524877 KLF18A0A0U1RQI7 1052 aa19.67■□□□□ 0.74
BEST1-203ENST00000524877 KIF20AO95235 890 aa19.67■□□□□ 0.74
BEST1-203ENST00000524877 CRB1P82279 1406 aa19.67■□□□□ 0.74
BEST1-203ENST00000524877 PRKG1Q13976 671 aa19.67■□□□□ 0.74
BEST1-203ENST00000524877 RBM27Q9P2N5 1060 aaKnown RBP19.67■□□□□ 0.74
BEST1-203ENST00000524877 USP8P40818 1118 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 TBC1D9Q6ZT07 1266 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 USP48Q86UV5 1035 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 ERMNQ8TAM6 284 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 CSADQ9Y600 493 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 NFKBIBQ15653 356 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 TCP11L1Q9NUJ3 509 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 CKAP2LQ8IYA6 745 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 BACH2Q9BYV9 841 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 GTF2IP78347 998 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms