RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ADAM19Q9H013 955 aa5.75□□□□□ -1.49
CSDE1-208ENST00000524652 KANSL3Q9P2N6 904 aa5.75□□□□□ -1.49
CSDE1-208ENST00000524652 RNF112Q9ULX5 631 aa5.75□□□□□ -1.49
CSDE1-208ENST00000524652 MTMR7Q9Y216 660 aa5.75□□□□□ -1.49
CSDE1-208ENST00000524652 UNC13AQ9UPW8 1703 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 H3BRJ5 948 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 FSCN2O14926 492 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 GLB1P16278 677 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 NPR3P17342 541 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 CES1P23141 567 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 UVSSAQ2YD98 709 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 TXNDC11Q6PKC3 985 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 ADAMTSL4Q6UY14 1074 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 AGGF1Q8N302 714 aaeCLIP5.74□□□□□ -1.49
CSDE1-208ENST00000524652 WNT8BQ93098 351 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 POP1Q99575 1024 aaKnown RBP5.74□□□□□ -1.49
CSDE1-208ENST00000524652 CEP41Q9BYV8 373 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 CNTN3Q9P232 1028 aa5.74□□□□□ -1.49
CSDE1-208ENST00000524652 WISP1O95388 367 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 USP5P45974 858 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 CABP4P57796 275 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 EHHADHQ08426 723 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 C8orf34Q49A92 452 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 C1orf127Q8N9H9 656 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 CHRDQ9H2X0 955 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 GGNBP2Q9H3C7 697 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 C1orf115Q9H7X2 142 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 SEC31BQ9NQW1 1179 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 DZANK1Q9NVP4 752 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 DCAF1Q9Y4B6 1507 aa5.73□□□□□ -1.49
CSDE1-208ENST00000524652 NFKBIEO00221 500 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 GSC2O15499 205 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 FAM13AO94988 1023 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 FSTP19883 344 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 PIP4K2BP78356 416 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 SF3B2Q13435 895 aaKnown RBP5.72□□□□□ -1.49
CSDE1-208ENST00000524652 ACAD11Q709F0 780 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 NBPF11Q86T75 865 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 CARD10Q9BWT7 1032 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 OSGEPQ9NPF4 335 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 SH2B1Q9NRF2 756 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-208ENST00000524652 POLIQ9UNA4 740 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 NACADO15069 1562 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 RB1CC1Q8TDY2 1594 aa5.72□□□□□ -1.49
CSDE1-208ENST00000524652 A6NHS1 94 aa5.71□□□□□ -1.5
CSDE1-208ENST00000524652 PDE2AO00408 941 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-208ENST00000524652 HYAL3O43820 417 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-208ENST00000524652 CDC25BP30305 580 aa5.71□□□□□ -1.5
CSDE1-208ENST00000524652 MTMR3Q13615 1198 aa5.71□□□□□ -1.5
CSDE1-208ENST00000524652 DUOXA2Q1HG44 320 aa5.71□□□□□ -1.5
CSDE1-208ENST00000524652 PHLDB3Q6NSJ2 640 aa5.71□□□□□ -1.5
CSDE1-208ENST00000524652 TMEM102Q8N9M5 508 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-208ENST00000524652 SNX29Q8TEQ0 813 aa5.71□□□□□ -1.5
CSDE1-208ENST00000524652 FOXD4L4Q8WXT5 416 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-208ENST00000524652 UBL7Q96S82 380 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-208ENST00000524652 KCNK4Q9NYG8 393 aa5.71□□□□□ -1.5
CSDE1-208ENST00000524652 RAXQ9Y2V3 346 aa5.71□□□□□ -1.5
CSDE1-208ENST00000524652 MYO15BQ96JP2 1530 aa5.7□□□□□ -1.5
CSDE1-208ENST00000524652 DHX15O43143 795 aaKnown RBP5.7□□□□□ -1.5
CSDE1-208ENST00000524652 ADAM11O75078 769 aa5.7□□□□□ -1.5
CSDE1-208ENST00000524652 TNFRSF21O75509 655 aa5.7□□□□□ -1.5
CSDE1-208ENST00000524652 EDN3P14138 238 aa5.7□□□□□ -1.5
CSDE1-208ENST00000524652 ACPPP15309 386 aa5.7□□□□□ -1.5
CSDE1-208ENST00000524652 KIAA1211Q6ZU35 1233 aa5.7□□□□□ -1.5
CSDE1-208ENST00000524652 KLHDC7BQ96G42 594 aa5.7□□□□□ -1.5
CSDE1-208ENST00000524652 SOX13Q9UN79 622 aa5.7□□□□□ -1.5
CSDE1-208ENST00000524652 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-208ENST00000524652 PHACTR2O75167 634 aa5.69□□□□□ -1.5
CSDE1-208ENST00000524652 FKBP4Q02790 459 aaKnown RBP eCLIP5.69□□□□□ -1.5
CSDE1-208ENST00000524652 AAMPQ13685 434 aa5.69□□□□□ -1.5
CSDE1-208ENST00000524652 GJD3Q8N144 294 aa5.69□□□□□ -1.5
CSDE1-208ENST00000524652 ARMC10Q8N2F6 343 aa5.69□□□□□ -1.5
CSDE1-208ENST00000524652 FAM46AQ96IP4 442 aaKnown RBP5.69□□□□□ -1.5
CSDE1-208ENST00000524652 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
CSDE1-208ENST00000524652 RNF208Q9H0X6 261 aa5.69□□□□□ -1.5
CSDE1-208ENST00000524652 STOML1Q9UBI4 398 aa5.69□□□□□ -1.5
CSDE1-208ENST00000524652 USTQ9Y2C2 406 aa5.69□□□□□ -1.5
CSDE1-208ENST00000524652 EREGO14944 169 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 FZD6O60353 706 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 ARL4DP49703 201 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 ANKRD34AQ69YU3 496 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 B4GALNT3Q6L9W6 998 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 UBASH3BQ8TF42 649 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 BSNDQ8WZ55 320 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 UTP4Q969X6 686 aaKnown RBP5.68□□□□□ -1.5
CSDE1-208ENST00000524652 MYRFLQ96LU7 910 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 HHIPQ96QV1 700 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 OSMRQ99650 979 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 ZKSCAN3Q9BRR0 538 aa5.68□□□□□ -1.5
CSDE1-208ENST00000524652 DDX3YO15523 660 aaKnown RBP5.67□□□□□ -1.5
CSDE1-208ENST00000524652 TRPA1O75762 1119 aa5.67□□□□□ -1.5
CSDE1-208ENST00000524652 IGLV1-40P01703 118 aa5.67□□□□□ -1.5
CSDE1-208ENST00000524652 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-208ENST00000524652 SLC7A3Q8WY07 619 aa5.67□□□□□ -1.5
CSDE1-208ENST00000524652 NXPE3Q969Y0 559 aa5.67□□□□□ -1.5
CSDE1-208ENST00000524652 PSMG3-AS1Q96PY0 264 aa5.67□□□□□ -1.5
CSDE1-208ENST00000524652 BHLHE41Q9C0J9 482 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-208ENST00000524652 EGFL7Q9UHF1 273 aa5.67□□□□□ -1.5
CSDE1-208ENST00000524652 AMOTL2Q9Y2J4 779 aa5.67□□□□□ -1.5
CSDE1-208ENST00000524652 ABL1P00519 1130 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms