RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 ARAP2Q8WZ64 1704 aa23.07■■□□□ 1.28
LMO1-203ENST00000524379 SMARCA5O60264 1052 aaPredicted RBP23.06■■□□□ 1.28
LMO1-203ENST00000524379 ADORA1P30542 326 aa23.06■■□□□ 1.28
LMO1-203ENST00000524379 ATP2B3Q16720 1220 aa23.06■■□□□ 1.28
LMO1-203ENST00000524379 SMC5Q8IY18 1101 aa23.06■■□□□ 1.28
LMO1-203ENST00000524379 SUPT20HQ8NEM7 779 aa23.06■■□□□ 1.28
LMO1-203ENST00000524379 RWDD1Q9H446 243 aaPredicted RBP23.06■■□□□ 1.28
LMO1-203ENST00000524379 IL1RAPL2Q9NP60 686 aa23.06■■□□□ 1.28
LMO1-203ENST00000524379 CCDC88AQ3V6T2 1871 aa23.05■■□□□ 1.28
LMO1-203ENST00000524379 PPIP5K2O43314 1243 aa23.05■■□□□ 1.28
LMO1-203ENST00000524379 RAB11FIP3O75154 756 aa23.05■■□□□ 1.28
LMO1-203ENST00000524379 KCNJ4P48050 445 aa23.05■■□□□ 1.28
LMO1-203ENST00000524379 TIMM10P62072 90 aa23.05■■□□□ 1.28
LMO1-203ENST00000524379 HSP90AB4PQ58FF6 505 aa23.05■■□□□ 1.28
LMO1-203ENST00000524379 EAF2Q96CJ1 260 aaPredicted RBP23.05■■□□□ 1.28
LMO1-203ENST00000524379 A0A1B0GUL7 405 aa23.04■■□□□ 1.28
LMO1-203ENST00000524379 LMNB1P20700 586 aa23.04■■□□□ 1.28
LMO1-203ENST00000524379 WASHC4Q2M389 1173 aa23.04■■□□□ 1.28
LMO1-203ENST00000524379 TNNI3KQ59H18 835 aa23.04■■□□□ 1.28
LMO1-203ENST00000524379 ERC1Q8IUD2 1116 aa23.04■■□□□ 1.28
LMO1-203ENST00000524379 LPIN2Q92539 896 aa23.04■■□□□ 1.28
LMO1-203ENST00000524379 KIF1BPQ96EK5 621 aa23.04■■□□□ 1.28
LMO1-203ENST00000524379 GPR108Q9NPR9 543 aa23.04■■□□□ 1.28
LMO1-203ENST00000524379 TLR7Q9NYK1 1049 aaKnown RBP23.04■■□□□ 1.28
LMO1-203ENST00000524379 FPGT-TNNI3KV9GXZ4 949 aa23.04■■□□□ 1.28
LMO1-203ENST00000524379 GYG1P46976 350 aa23.03■■□□□ 1.28
LMO1-203ENST00000524379 DOK7Q18PE1 504 aa23.03■■□□□ 1.28
LMO1-203ENST00000524379 FAM84BQ96KN1 310 aaPredicted RBP23.03■■□□□ 1.28
LMO1-203ENST00000524379 EYA3Q99504 573 aa23.03■■□□□ 1.28
LMO1-203ENST00000524379 KDM2BQ8NHM5 1336 aa23.03■■□□□ 1.28
LMO1-203ENST00000524379 C16orf71Q8IYS4 520 aaPredicted RBP23.02■■□□□ 1.28
LMO1-203ENST00000524379 DICER1Q9UPY3 1922 aaKnown RBP23.02■■□□□ 1.28
LMO1-203ENST00000524379 YDJCA8MPS7 323 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 SLC5A1P13866 664 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 FBXO33Q7Z6M2 555 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 LARGE2Q8N3Y3 721 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 GCC1Q96CN9 775 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 XAGE2Q96GT9 111 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 DBNDD2Q9BQY9 259 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 LRRCC1Q9C099 1032 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 ZC3H12CQ9C0D7 883 aaKnown RBP23.01■■□□□ 1.27
LMO1-203ENST00000524379 VPS33BQ9H267 617 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 DBNDD1Q9H9R9 158 aa23.01■■□□□ 1.27
LMO1-203ENST00000524379 DBNLQ9UJU6 430 aaKnown RBP23.01■■□□□ 1.27
LMO1-203ENST00000524379 TIAM2Q8IVF5 1701 aa23■■□□□ 1.27
LMO1-203ENST00000524379 BCAMP50895 628 aa23■■□□□ 1.27
LMO1-203ENST00000524379 APLP1P51693 650 aa23■■□□□ 1.27
LMO1-203ENST00000524379 ERICH6BQ5W0A0 696 aa23■■□□□ 1.27
LMO1-203ENST00000524379 CCDC8Q9H0W5 538 aaPredicted RBP23■■□□□ 1.27
LMO1-203ENST00000524379 AKAP2Q9Y2D5 859 aa23■■□□□ 1.27
LMO1-203ENST00000524379 SCN9AQ15858 1988 aa23■■□□□ 1.27
LMO1-203ENST00000524379 IFIT1P09914 478 aaKnown RBP22.99■■□□□ 1.27
LMO1-203ENST00000524379 AACSQ86V21 672 aa22.99■■□□□ 1.27
LMO1-203ENST00000524379 RBM46Q8TBY0 533 aaKnown RBP22.99■■□□□ 1.27
LMO1-203ENST00000524379 RRAGCQ9HB90 399 aa22.99■■□□□ 1.27
LMO1-203ENST00000524379 KCNQ5Q9NR82 932 aa22.99■■□□□ 1.27
LMO1-203ENST00000524379 ZNF646O15015 1829 aaPredicted RBP22.98■■□□□ 1.27
LMO1-203ENST00000524379 ECE2O60344 883 aa22.98■■□□□ 1.27
LMO1-203ENST00000524379 PHKA1P46020 1223 aa22.98■■□□□ 1.27
LMO1-203ENST00000524379 B4GALNT3Q6L9W6 998 aa22.98■■□□□ 1.27
LMO1-203ENST00000524379 OTUD7AQ8TE49 926 aaPredicted RBP22.98■■□□□ 1.27
LMO1-203ENST00000524379 NEUROD6Q96NK8 337 aa22.98■■□□□ 1.27
LMO1-203ENST00000524379 CD209Q9NNX6 404 aa22.98■■□□□ 1.27
LMO1-203ENST00000524379 COL1A1P02452 1464 aaPredicted RBP22.98■■□□□ 1.27
LMO1-203ENST00000524379 FZD9O00144 591 aa22.96■■□□□ 1.27
LMO1-203ENST00000524379 IL1R1P14778 569 aa22.96■■□□□ 1.27
LMO1-203ENST00000524379 HIBADHP31937 336 aaKnown RBP22.96■■□□□ 1.27
LMO1-203ENST00000524379 ANKRD45Q5TZF3 282 aa22.96■■□□□ 1.27
LMO1-203ENST00000524379 CCDC102BQ68D86 513 aa22.96■■□□□ 1.27
LMO1-203ENST00000524379 NIM1KQ8IY84 436 aa22.96■■□□□ 1.27
LMO1-203ENST00000524379 COA1Q9GZY4 146 aa22.96■■□□□ 1.27
LMO1-203ENST00000524379 BCL11AQ9H165 835 aa22.96■■□□□ 1.27
LMO1-203ENST00000524379 ZNF541Q9H0D2 1346 aa22.96■■□□□ 1.27
LMO1-203ENST00000524379 ZC3H4Q9UPT8 1303 aaKnown RBP22.96■■□□□ 1.27
LMO1-203ENST00000524379 NUCB1Q02818 461 aa22.95■■□□□ 1.26
LMO1-203ENST00000524379 CLASRPQ8N2M8 674 aaKnown RBP22.95■■□□□ 1.26
LMO1-203ENST00000524379 TDRD7Q8NHU6 1098 aaKnown RBP22.95■■□□□ 1.26
LMO1-203ENST00000524379 PPP4R2Q9NY27 417 aa22.95■■□□□ 1.26
LMO1-203ENST00000524379 ZNRF3Q9ULT6 936 aa22.95■■□□□ 1.26
LMO1-203ENST00000524379 IQSEC3Q9UPP2 1182 aaPredicted RBP22.95■■□□□ 1.26
LMO1-203ENST00000524379 SALL3Q9BXA9 1300 aa22.94■■□□□ 1.26
LMO1-203ENST00000524379 ZNF804AQ7Z570 1209 aa22.94■■□□□ 1.26
LMO1-203ENST00000524379 CXCL9Q07325 125 aa22.93■■□□□ 1.26
LMO1-203ENST00000524379 FSTL1Q12841 308 aa22.93■■□□□ 1.26
LMO1-203ENST00000524379 SCARF1Q14162 830 aa22.93■■□□□ 1.26
LMO1-203ENST00000524379 JDP2Q8WYK2 163 aa22.93■■□□□ 1.26
LMO1-203ENST00000524379 CCDC136Q96JN2 1154 aa22.93■■□□□ 1.26
LMO1-203ENST00000524379 LNPKQ9C0E8 428 aa22.93■■□□□ 1.26
LMO1-203ENST00000524379 GLTPD2A6NH11 291 aa22.92■■□□□ 1.26
LMO1-203ENST00000524379 CAVIN4Q5BKX8 364 aa22.92■■□□□ 1.26
LMO1-203ENST00000524379 PODNQ7Z5L7 613 aa22.92■■□□□ 1.26
LMO1-203ENST00000524379 PSME4Q14997 1843 aa22.92■■□□□ 1.26
LMO1-203ENST00000524379 RAD17O75943 681 aa22.91■■□□□ 1.26
LMO1-203ENST00000524379 CHD1LQ86WJ1 897 aa22.91■■□□□ 1.26
LMO1-203ENST00000524379 JAG2Q9Y219 1238 aa22.91■■□□□ 1.26
LMO1-203ENST00000524379 ZBTB22O15209 634 aa22.9■■□□□ 1.26
LMO1-203ENST00000524379 IFIT2P09913 472 aaKnown RBP22.9■■□□□ 1.26
LMO1-203ENST00000524379 PDE4AP27815 886 aa22.9■■□□□ 1.26
LMO1-203ENST00000524379 ARID4AP29374 1257 aaPredicted RBP22.9■■□□□ 1.26
LMO1-203ENST00000524379 RASGRF1Q13972 1273 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms