RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 TTLL11Q8NHH1 800 aa29.32■■■□□ 2.28
PVT1-218ENST00000523328 BSDC1Q9NW68 430 aaPredicted RBP29.32■■■□□ 2.28
PVT1-218ENST00000523328 MINPP1Q9UNW1 487 aa29.32■■■□□ 2.28
PVT1-218ENST00000523328 DACT2Q5SW24 774 aa29.3■■■□□ 2.28
PVT1-218ENST00000523328 PRAMEF18Q5VWM3 479 aa29.3■■■□□ 2.28
PVT1-218ENST00000523328 TSPYL6Q8N831 410 aa29.3■■■□□ 2.28
PVT1-218ENST00000523328 MXD3Q9BW11 206 aa29.3■■■□□ 2.28
PVT1-218ENST00000523328 GREM2Q9H772 168 aa29.3■■■□□ 2.28
PVT1-218ENST00000523328 UBE2Q2LH0YL09 131 aa29.29■■■□□ 2.28
PVT1-218ENST00000523328 KSR2Q6VAB6 950 aa29.29■■■□□ 2.28
PVT1-218ENST00000523328 PRKRIP1Q9H875 184 aaPredicted RBP29.29■■■□□ 2.28
PVT1-218ENST00000523328 PI4KAP2A4QPH2 592 aa29.28■■■□□ 2.28
PVT1-218ENST00000523328 CCT4P50991 539 aaKnown RBP29.28■■■□□ 2.28
PVT1-218ENST00000523328 PI4KAP1Q8N8J0 262 aa29.28■■■□□ 2.28
PVT1-218ENST00000523328 CHMP4AQ9BY43 222 aa29.28■■■□□ 2.28
PVT1-218ENST00000523328 WNT10BO00744 389 aa29.27■■■□□ 2.28
PVT1-218ENST00000523328 TXNRD3Q86VQ6 643 aa29.26■■■□□ 2.27
PVT1-218ENST00000523328 MYO3BQ8WXR4 1341 aa29.25■■■□□ 2.27
PVT1-218ENST00000523328 CWF19L2Q2TBE0 894 aaKnown RBP29.25■■■□□ 2.27
PVT1-218ENST00000523328 STRIP1Q5VSL9 837 aa29.25■■■□□ 2.27
PVT1-218ENST00000523328 OGFOD1Q8N543 542 aa29.25■■■□□ 2.27
PVT1-218ENST00000523328 COA1Q9GZY4 146 aa29.25■■■□□ 2.27
PVT1-218ENST00000523328 TBC1D8O95759 1140 aa29.24■■■□□ 2.27
PVT1-218ENST00000523328 ZNF296Q8WUU4 475 aaPredicted RBP29.24■■■□□ 2.27
PVT1-218ENST00000523328 HPS5Q9UPZ3 1129 aa29.24■■■□□ 2.27
PVT1-218ENST00000523328 NEURL1BA8MQ27 555 aa29.23■■■□□ 2.27
PVT1-218ENST00000523328 TM4SF4P48230 202 aa29.23■■■□□ 2.27
PVT1-218ENST00000523328 NEXNQ0ZGT2 675 aa29.22■■■□□ 2.27
PVT1-218ENST00000523328 TTLL12Q14166 644 aaPredicted RBP29.22■■■□□ 2.27
PVT1-218ENST00000523328 FBXW7Q969H0 707 aa29.22■■■□□ 2.27
PVT1-218ENST00000523328 LEMD3Q9Y2U8 911 aa29.22■■■□□ 2.27
PVT1-218ENST00000523328 H7C1W4 665 aa29.21■■■□□ 2.27
PVT1-218ENST00000523328 PKN2Q16513 984 aaKnown RBP29.21■■■□□ 2.27
PVT1-218ENST00000523328 SASH1O94885 1247 aa29.2■■■□□ 2.26
PVT1-218ENST00000523328 NF2P35240 595 aa29.2■■■□□ 2.26
PVT1-218ENST00000523328 UBE3BQ7Z3V4 1068 aa29.2■■■□□ 2.26
PVT1-218ENST00000523328 TSR2Q969E8 191 aaKnown RBP29.2■■■□□ 2.26
PVT1-218ENST00000523328 HDAC9Q9UKV0 1011 aa29.2■■■□□ 2.26
PVT1-218ENST00000523328 KLRK1P26718 216 aa29.19■■■□□ 2.26
PVT1-218ENST00000523328 MMP14P50281 582 aa29.19■■■□□ 2.26
PVT1-218ENST00000523328 NOM1Q5C9Z4 860 aaKnown RBP29.19■■■□□ 2.26
PVT1-218ENST00000523328 IGHMBP2P38935 993 aaKnown RBP29.18■■■□□ 2.26
PVT1-218ENST00000523328 MKRN3Q13064 507 aaKnown RBP29.18■■■□□ 2.26
PVT1-218ENST00000523328 TTLL5Q6EMB2 1281 aa29.18■■■□□ 2.26
PVT1-218ENST00000523328 G2E3Q7L622 706 aa29.18■■■□□ 2.26
PVT1-218ENST00000523328 ZBED3Q96IU2 234 aaPredicted RBP29.18■■■□□ 2.26
PVT1-218ENST00000523328 PLA2G12BQ9BX93 195 aa29.18■■■□□ 2.26
PVT1-218ENST00000523328 STK31Q9BXU1 1019 aa29.18■■■□□ 2.26
PVT1-218ENST00000523328 PCDH10Q9P2E7 1040 aa29.18■■■□□ 2.26
PVT1-218ENST00000523328 ZNF804BA4D1E1 1349 aa29.18■■■□□ 2.26
PVT1-218ENST00000523328 GPR25O00155 361 aa29.17■■■□□ 2.26
PVT1-218ENST00000523328 PTPN12Q05209 780 aaKnown RBP29.17■■■□□ 2.26
PVT1-218ENST00000523328 ITGA6P23229 1130 aa29.16■■■□□ 2.26
PVT1-218ENST00000523328 KIAA0825Q8IV33 1275 aa29.16■■■□□ 2.26
PVT1-218ENST00000523328 CASP7P55210 303 aa29.15■■■□□ 2.26
PVT1-218ENST00000523328 APOBEC3FQ8IUX4 373 aaKnown RBP29.15■■■□□ 2.26
PVT1-218ENST00000523328 CFHR5Q9BXR6 569 aa29.15■■■□□ 2.26
PVT1-218ENST00000523328 ANKRD2Q9GZV1 360 aa29.15■■■□□ 2.26
PVT1-218ENST00000523328 SREBF2Q12772 1141 aa29.14■■■□□ 2.26
PVT1-218ENST00000523328 GCKRQ14397 625 aa29.14■■■□□ 2.26
PVT1-218ENST00000523328 LDLRAD1Q5T700 205 aa29.14■■■□□ 2.26
PVT1-218ENST00000523328 ARMC9Q7Z3E5 817 aa29.14■■■□□ 2.26
PVT1-218ENST00000523328 ECM29Q5VYK3 1845 aa29.13■■■□□ 2.25
PVT1-218ENST00000523328 CSF1RP07333 972 aa29.13■■■□□ 2.25
PVT1-218ENST00000523328 GTF2IP78347 998 aa29.13■■■□□ 2.25
PVT1-218ENST00000523328 PRKG1Q13976 671 aa29.13■■■□□ 2.25
PVT1-218ENST00000523328 R3HDMLQ9H3Y0 253 aa29.13■■■□□ 2.25
PVT1-218ENST00000523328 A0A1B0GUL6 1792 aa29.12■■■□□ 2.25
PVT1-218ENST00000523328 SLC4A2P04920 1241 aa29.12■■■□□ 2.25
PVT1-218ENST00000523328 TWISTNBQ3B726 338 aaPredicted RBP29.12■■■□□ 2.25
PVT1-218ENST00000523328 PRPF38BQ5VTL8 546 aaKnown RBP29.12■■■□□ 2.25
PVT1-218ENST00000523328 MPHOSPH8Q99549 860 aa29.12■■■□□ 2.25
PVT1-218ENST00000523328 CACNA1FO60840 1977 aa29.12■■■□□ 2.25
PVT1-218ENST00000523328 COL1A1P02452 1464 aaPredicted RBP29.11■■■□□ 2.25
PVT1-218ENST00000523328 SPRYD7Q5W111 196 aa29.11■■■□□ 2.25
PVT1-218ENST00000523328 FBXO46Q6PJ61 603 aaPredicted RBP29.11■■■□□ 2.25
PVT1-218ENST00000523328 LAMB1P07942 1786 aa29.11■■■□□ 2.25
PVT1-218ENST00000523328 CHRNDQ07001 517 aa29.1■■■□□ 2.25
PVT1-218ENST00000523328 CD209Q9NNX6 404 aa29.1■■■□□ 2.25
PVT1-218ENST00000523328 ANGEL1Q9UNK9 670 aaKnown RBP29.1■■■□□ 2.25
PVT1-218ENST00000523328 FZD1Q9UP38 647 aa29.1■■■□□ 2.25
PVT1-218ENST00000523328 IRS2Q9Y4H2 1338 aa29.1■■■□□ 2.25
PVT1-218ENST00000523328 FKTNO75072 461 aa29.09■■■□□ 2.25
PVT1-218ENST00000523328 CCDC27Q2M243 656 aa29.09■■■□□ 2.25
PVT1-218ENST00000523328 FLIIQ13045 1269 aa29.08■■■□□ 2.25
PVT1-218ENST00000523328 CERS5Q8N5B7 392 aa29.08■■■□□ 2.25
PVT1-218ENST00000523328 SSC5DA1L4H1 1573 aa29.07■■■□□ 2.24
PVT1-218ENST00000523328 SNAP23O00161 211 aa29.07■■■□□ 2.24
PVT1-218ENST00000523328 KCNJ4P48050 445 aa29.07■■■□□ 2.24
PVT1-218ENST00000523328 WWC1Q8IX03 1113 aa29.07■■■□□ 2.24
PVT1-218ENST00000523328 DEFB129Q9H1M3 183 aa29.07■■■□□ 2.24
PVT1-218ENST00000523328 MYH16Q9H6N6 1097 aa29.07■■■□□ 2.24
PVT1-218ENST00000523328 MAP3K11Q16584 847 aa29.06■■■□□ 2.24
PVT1-218ENST00000523328 MTMR14Q8NCE2 650 aa29.06■■■□□ 2.24
PVT1-218ENST00000523328 LINS1Q8NG48 757 aa29.06■■■□□ 2.24
PVT1-218ENST00000523328 DNAAF4Q8WXU2 420 aa29.06■■■□□ 2.24
PVT1-218ENST00000523328 DLGAP5Q15398 846 aa29.05■■■□□ 2.24
PVT1-218ENST00000523328 C15orf52Q6ZUT6 534 aaKnown RBP29.05■■■□□ 2.24
PVT1-218ENST00000523328 PCDHAC2Q9Y5I4 1007 aa29.05■■■□□ 2.24
PVT1-218ENST00000523328 ALDH1A1P00352 501 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms