RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	ARHGEF37	A1IGU5	675 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	MCM10	Q7L590	875 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	RTKN2	Q8IZC4	609 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	SREK1	Q8WXA9	508 aa	Known RBP	11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	ZFYVE9	O95405	1425 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	C8orf34	Q49A92	452 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	EXOC4	Q96A65	974 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	PAXBP1	Q9Y5B6	917 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	CTNNA2	P26232	953 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	PPP2R3C	Q969Q6	453 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	TRERF1	Q96PN7	1200 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	USP25	Q9UHP3	1055 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	GNA11	P29992	359 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	FLII	Q13045	1269 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	ZSCAN23	Q3MJ62	389 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	SYNC	Q9H7C4	482 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	PNMA3	Q9UL41	463 aa		11.79	□□□□□ -0.52
TCF7-223	ENST00000522653	KDM4A	O75164	1064 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	KIF4B	Q2VIQ3	1234 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	KSR2	Q6VAB6	950 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	UBE3B	Q7Z3V4	1068 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	NEMF	O60524	1076 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	SERPINC1	P01008	464 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	MAP3K11	Q16584	847 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	TMEM67	Q5HYA8	995 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	HIBADH	P31937	336 aa	Known RBP	11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	IREB2	P48200	963 aa	Known RBP	11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	GTF2A1	P52655	376 aa	Predicted RBP	11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	LARP1B	Q659C4	914 aa	Known RBP	11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	CCDC125	Q86Z20	511 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	GBP3	Q9H0R5	595 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	CEP83	Q9Y592	693 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	BACH1	O14867	736 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	MX1	P20591	662 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	CCDC14	Q49A88	953 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	CCDC93	Q567U6	631 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	RMND1	Q9NWS8	449 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	STX8	Q9UNK0	236 aa		11.78	□□□□□ -0.52
TCF7-223	ENST00000522653	CCDC171	Q6TFL3	1326 aa		11.77	□□□□□ -0.52
TCF7-223	ENST00000522653	ADGRF5	Q8IZF2	1346 aa		11.77	□□□□□ -0.52
TCF7-223	ENST00000522653	RBM25	P49756	843 aa	Known RBP	11.77	□□□□□ -0.52
TCF7-223	ENST00000522653	NLRX1	Q86UT6	975 aa		11.77	□□□□□ -0.52
TCF7-223	ENST00000522653	UNC5CL	Q8IV45	518 aa		11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	MBIP	Q9NS73	344 aa		11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	ECHDC1	Q9NTX5	307 aa		11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	PDE8A	O60658	829 aa		11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	WTAP	Q15007	396 aa		11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	ZNF354C	Q86Y25	554 aa		11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	TBC1D5	Q92609	795 aa		11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	JAKMIP1	Q96N16	626 aa	Known RBP	11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	IFIT1B	Q5T764	474 aa	Known RBP	11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	KIAA1524	Q8TCG1	905 aa		11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	RBM28	Q9NW13	759 aa	Known RBP	11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	MAP3K5	Q99683	1374 aa		11.77	□□□□□ -0.53
TCF7-223	ENST00000522653	NUP153	P49790	1475 aa	Known RBP	11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	ADCY5	O95622	1261 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	USP14	P54578	494 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	NPAT	Q14207	1427 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	CTR9	Q6PD62	1173 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	TEX11	Q8IYF3	940 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	EMILIN1	Q9Y6C2	1016 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	SLC4A4	Q9Y6R1	1079 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	GNPTAB	Q3T906	1256 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	AP5M1	Q9H0R1	490 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	TAOK3	Q9H2K8	898 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	IARS	P41252	1262 aa	Known RBP	11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	IFI16	Q16666	785 aa	Known RBP	11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	CACNA2D4	Q7Z3S7	1137 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	GPATCH11	Q8N954	259 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	XAGE3	Q8WTP9	111 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	CCDC102A	Q96A19	550 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	CD2AP	Q9Y5K6	639 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	BRPF1	P55201	1214 aa	Predicted RBP	11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	SPA17	Q15506	151 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	C8orf76	Q96K31	380 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	FAM193B	Q96PV7	902 aa	Predicted RBP	11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	ALS2CR12	Q96Q35	445 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	EXOC7	Q9UPT5	735 aa		11.76	□□□□□ -0.53
TCF7-223	ENST00000522653	HOXB7	P09629	217 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	CHURC1	Q8WUH1	139 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	C16orf45	Q96MC5	204 aa	Predicted RBP	11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	UBA7	P41226	1012 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	SPATA31A6	Q5VVP1	1343 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	GAS8	O95995	478 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	IFT74	Q96LB3	600 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	TRIM6	Q9C030	488 aa	Predicted RBP	11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	OGFR	Q9NZT2	677 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	FER	P16591	822 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	PRPH	P41219	470 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	MCF2L2	Q86YR7	1114 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	WDR17	Q8IZU2	1322 aa		11.75	□□□□□ -0.53
TCF7-223	ENST00000522653	EP400NL	Q6ZTU2	488 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	EXOC8	Q8IYI6	725 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	NLRP1	Q9C000	1473 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	SHANK2	Q9UPX8	1470 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	TMEM2	Q9UHN6	1383 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 642.5 ms