RNA–Protein interactions for RNA: ENST00000522642.1

GINS4-208, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 390 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-208ENST00000522642 NBPF9Q3BBW0 867 aa9.5□□□□□ -0.89
GINS4-208ENST00000522642 PODNQ7Z5L7 613 aa9.5□□□□□ -0.89
GINS4-208ENST00000522642 ANKRD13AQ8IZ07 590 aa9.5□□□□□ -0.89
GINS4-208ENST00000522642 U2AF1L4Q8WU68 220 aaKnown RBP9.5□□□□□ -0.89
GINS4-208ENST00000522642 UBE2OQ9C0C9 1292 aaKnown RBP9.5□□□□□ -0.89
GINS4-208ENST00000522642 SCAF8Q9UPN6 1271 aaKnown RBP9.5□□□□□ -0.89
GINS4-208ENST00000522642 PPP2R3BQ9Y5P8 575 aa9.5□□□□□ -0.89
GINS4-208ENST00000522642 MYO3BQ8WXR4 1341 aa9.5□□□□□ -0.89
GINS4-208ENST00000522642 CEMIPQ8WUJ3 1361 aa9.5□□□□□ -0.89
GINS4-208ENST00000522642 WNT10BO00744 389 aa9.49□□□□□ -0.89
GINS4-208ENST00000522642 SGPL1O95470 568 aa9.49□□□□□ -0.89
GINS4-208ENST00000522642 TFRCP02786 760 aaKnown RBP9.49□□□□□ -0.89
GINS4-208ENST00000522642 GTF2A2P52657 109 aa9.49□□□□□ -0.89
GINS4-208ENST00000522642 GPSM2P81274 684 aa9.49□□□□□ -0.89
GINS4-208ENST00000522642 LACTBP83111 547 aaPredicted RBP9.49□□□□□ -0.89
GINS4-208ENST00000522642 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
GINS4-208ENST00000522642 TBC1D16Q8TBP0 767 aa9.49□□□□□ -0.89
GINS4-208ENST00000522642 GMLQ99445 158 aa9.49□□□□□ -0.89
GINS4-208ENST00000522642 ARIH1Q9Y4X5 557 aaPredicted RBP9.49□□□□□ -0.89
GINS4-208ENST00000522642 HCLS1P14317 486 aaPredicted RBP9.48□□□□□ -0.89
GINS4-208ENST00000522642 MYL6BP14649 208 aa9.48□□□□□ -0.89
GINS4-208ENST00000522642 TJAP1Q5JTD0 557 aa9.48□□□□□ -0.89
GINS4-208ENST00000522642 TTLL7Q6ZT98 887 aa9.48□□□□□ -0.89
GINS4-208ENST00000522642 NECAB2Q7Z6G3 386 aa9.48□□□□□ -0.89
GINS4-208ENST00000522642 MAFAQ8NHW3 353 aaPredicted RBP9.48□□□□□ -0.89
GINS4-208ENST00000522642 ANKIB1Q9P2G1 1089 aa9.48□□□□□ -0.89
GINS4-208ENST00000522642 TRMT112Q9UI30 125 aaKnown RBP9.48□□□□□ -0.89
GINS4-208ENST00000522642 GGA1Q9UJY5 639 aa9.48□□□□□ -0.89
GINS4-208ENST00000522642 FAM205AQ6ZU69 1335 aa9.48□□□□□ -0.89
GINS4-208ENST00000522642 SH3TC1Q8TE82 1336 aa9.48□□□□□ -0.89
GINS4-208ENST00000522642 DDX60Q8IY21 1712 aaKnown RBP9.48□□□□□ -0.89
GINS4-208ENST00000522642 COL1A1P02452 1464 aaPredicted RBP9.47□□□□□ -0.89
GINS4-208ENST00000522642 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
GINS4-208ENST00000522642 TLR2O60603 784 aa9.47□□□□□ -0.89
GINS4-208ENST00000522642 MAP3K12Q12852 859 aa9.47□□□□□ -0.89
GINS4-208ENST00000522642 PTPN18Q99952 460 aa9.47□□□□□ -0.89
GINS4-208ENST00000522642 ZCCHC17Q9NP64 241 aaKnown RBP9.47□□□□□ -0.89
GINS4-208ENST00000522642 PODXL2Q9NZ53 605 aa9.47□□□□□ -0.89
GINS4-208ENST00000522642 SRRDQ9UH36 339 aa9.47□□□□□ -0.89
GINS4-208ENST00000522642 KNSTRNQ9Y448 316 aa9.47□□□□□ -0.89
GINS4-208ENST00000522642 RIPOR2Q9Y4F9 1068 aa9.47□□□□□ -0.89
GINS4-208ENST00000522642 MKI67P46013 3256 aaKnown RBP9.46□□□□□ -0.89
GINS4-208ENST00000522642 CCL15-CCL14A0A0B4J2E2 113 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 MYO1BO43795 1136 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 UFL1O94874 794 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 FMNL1O95466 1100 aaPredicted RBP9.46□□□□□ -0.9
GINS4-208ENST00000522642 RPS8P62241 208 aaKnown RBP9.46□□□□□ -0.9
GINS4-208ENST00000522642 EIF4G2P78344 907 aaKnown RBP eCLIP9.46□□□□□ -0.9
GINS4-208ENST00000522642 CAP1Q01518 475 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 CCL15Q16663 113 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 SLAIN1Q8ND83 568 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 PNISRQ8TF01 805 aaKnown RBP9.46□□□□□ -0.9
GINS4-208ENST00000522642 CLMNQ96JQ2 1002 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 SNX27Q96L92 541 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 GUCD1Q96NT3 240 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 DEFB129Q9H1M3 183 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 PANK3Q9H999 370 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 RAPGEFL1Q9UHV5 662 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 ZNF646O15015 1829 aaPredicted RBP9.46□□□□□ -0.9
GINS4-208ENST00000522642 NUP98P52948 1817 aa9.46□□□□□ -0.9
GINS4-208ENST00000522642 U2SURPO15042 1029 aaKnown RBP9.45□□□□□ -0.9
GINS4-208ENST00000522642 HSP90B1P14625 803 aaKnown RBP9.45□□□□□ -0.9
GINS4-208ENST00000522642 TAF7Q15545 349 aaPredicted RBP9.45□□□□□ -0.9
GINS4-208ENST00000522642 C7orf61Q8IZ16 206 aa9.45□□□□□ -0.9
GINS4-208ENST00000522642 CNKSR2Q8WXI2 1034 aa9.45□□□□□ -0.9
GINS4-208ENST00000522642 OPTNQ96CV9 577 aa9.45□□□□□ -0.9
GINS4-208ENST00000522642 ZMYND8Q9ULU4 1186 aaPredicted RBP9.45□□□□□ -0.9
GINS4-208ENST00000522642 HCN4Q9Y3Q4 1203 aa9.45□□□□□ -0.9
GINS4-208ENST00000522642 SYNGAP1Q96PV0 1343 aa9.45□□□□□ -0.9
GINS4-208ENST00000522642 DUOX1Q9NRD9 1551 aa9.45□□□□□ -0.9
GINS4-208ENST00000522642 MAGEA10P43363 369 aaPredicted RBP9.44□□□□□ -0.9
GINS4-208ENST00000522642 PSMC4P43686 418 aa9.44□□□□□ -0.9
GINS4-208ENST00000522642 SF3B3Q15393 1217 aaKnown RBP9.44□□□□□ -0.9
GINS4-208ENST00000522642 ANKLE1Q8NAG6 615 aa9.44□□□□□ -0.9
GINS4-208ENST00000522642 CELF1Q92879 486 aaKnown RBP9.44□□□□□ -0.9
GINS4-208ENST00000522642 FAM161BQ96MY7 647 aa9.44□□□□□ -0.9
GINS4-208ENST00000522642 C1QTNF1Q9BXJ1 281 aa9.44□□□□□ -0.9
GINS4-208ENST00000522642 MYPNQ86TC9 1320 aa9.44□□□□□ -0.9
GINS4-208ENST00000522642 SIPA1L3O60292 1781 aaPredicted RBP9.43□□□□□ -0.9
GINS4-208ENST00000522642 HTATSF1O43719 755 aaKnown RBP9.43□□□□□ -0.9
GINS4-208ENST00000522642 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
GINS4-208ENST00000522642 SASH1O94885 1247 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 CETPP11597 493 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 ATP2B4P23634 1241 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 DLGAP5Q15398 846 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 STRIP1Q5VSL9 837 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 NLRP10Q86W26 655 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 BRI3BPQ8WY22 251 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 PAWRQ96IZ0 340 aaKnown RBP9.43□□□□□ -0.9
GINS4-208ENST00000522642 MS4A4AQ96JQ5 239 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 CDX2Q99626 313 aaPredicted RBP9.43□□□□□ -0.9
GINS4-208ENST00000522642 ARHGAP39Q9C0H5 1083 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 COL6A3P12111 3177 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 TTC28Q96AY4 2481 aa9.43□□□□□ -0.9
GINS4-208ENST00000522642 TAF1P21675 1872 aa9.42□□□□□ -0.9
GINS4-208ENST00000522642 ANKRD36CQ5JPF3 1778 aa9.42□□□□□ -0.9
GINS4-208ENST00000522642 OSBPP22059 807 aa9.42□□□□□ -0.9
GINS4-208ENST00000522642 GJA5P36382 358 aa9.42□□□□□ -0.9
GINS4-208ENST00000522642 IL27Q8NEV9 243 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms