RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 LINC01559Q495D7 138 aa10.73□□□□□ -0.69
PVT1-213ENST00000522414 C9orf131Q5VYM1 1079 aa10.73□□□□□ -0.69
PVT1-213ENST00000522414 GAS2L2Q8NHY3 880 aa10.73□□□□□ -0.69
PVT1-213ENST00000522414 RSPH6AQ9H0K4 717 aa10.73□□□□□ -0.69
PVT1-213ENST00000522414 TBC1D2BQ9UPU7 963 aa10.73□□□□□ -0.69
PVT1-213ENST00000522414 BTBD11A6QL63 1104 aa10.72□□□□□ -0.69
PVT1-213ENST00000522414 CCNYL3P0C7X3 344 aa10.72□□□□□ -0.69
PVT1-213ENST00000522414 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
PVT1-213ENST00000522414 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.69
PVT1-213ENST00000522414 CCDC102AQ96A19 550 aa10.72□□□□□ -0.69
PVT1-213ENST00000522414 CFAP53Q96M91 514 aa10.72□□□□□ -0.69
PVT1-213ENST00000522414 ZNF330Q9Y3S2 320 aaPredicted RBP10.72□□□□□ -0.69
PVT1-213ENST00000522414 SOBPA7XYQ1 873 aa10.71□□□□□ -0.69
PVT1-213ENST00000522414 MS4A1P11836 297 aa10.71□□□□□ -0.69
PVT1-213ENST00000522414 PIP4K2AP48426 406 aaPredicted RBP10.71□□□□□ -0.69
PVT1-213ENST00000522414 DCTN1Q14203 1278 aa10.71□□□□□ -0.69
PVT1-213ENST00000522414 TBC1D9BQ66K14 1250 aa10.71□□□□□ -0.69
PVT1-213ENST00000522414 MCM10Q7L590 875 aa10.71□□□□□ -0.69
PVT1-213ENST00000522414 BAP1Q92560 729 aa10.71□□□□□ -0.69
PVT1-213ENST00000522414 UNC93B1Q9H1C4 597 aa10.71□□□□□ -0.69
PVT1-213ENST00000522414 NMRK2Q9NPI5 230 aa10.71□□□□□ -0.69
PVT1-213ENST00000522414 USP16Q9Y5T5 823 aa10.71□□□□□ -0.69
PVT1-213ENST00000522414 NRXN2Q9P2S2 1712 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 COL15A1P39059 1388 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 HEG1Q9ULI3 1381 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 PRAMEF22A3QJZ6 481 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 FDX1P10109 184 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 HSPA6P17066 643 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 C2CD5Q86YS7 1000 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 FMNL2Q96PY5 1086 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 TEX13AQ9BXU3 409 aaPredicted RBP10.7□□□□□ -0.7
PVT1-213ENST00000522414 GPCPD1Q9NPB8 672 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 MIS18AQ9NYP9 233 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
PVT1-213ENST00000522414 NNTQ13423 1086 aa10.69□□□□□ -0.7
PVT1-213ENST00000522414 NUTM1Q86Y26 1132 aa10.69□□□□□ -0.7
PVT1-213ENST00000522414 EVA1BQ9NVM1 165 aa10.69□□□□□ -0.7
PVT1-213ENST00000522414 RNF181Q9P0P0 153 aa10.69□□□□□ -0.7
PVT1-213ENST00000522414 ARFGEF1Q9Y6D6 1849 aa10.69□□□□□ -0.7
PVT1-213ENST00000522414 A0A087WZG4 1122 aa10.68□□□□□ -0.7
PVT1-213ENST00000522414 H0YIN7 160 aa10.68□□□□□ -0.7
PVT1-213ENST00000522414 C6orf229H3BNL8 230 aa10.68□□□□□ -0.7
PVT1-213ENST00000522414 TIMP2P16035 220 aa10.68□□□□□ -0.7
PVT1-213ENST00000522414 IL6STP40189 918 aaPredicted RBP10.68□□□□□ -0.7
PVT1-213ENST00000522414 PRELPP51888 382 aa10.68□□□□□ -0.7
PVT1-213ENST00000522414 MRPL14Q6P1L8 145 aaKnown RBP10.68□□□□□ -0.7
PVT1-213ENST00000522414 RTF1Q92541 710 aaKnown RBP10.68□□□□□ -0.7
PVT1-213ENST00000522414 PURBQ96QR8 312 aaKnown RBP10.68□□□□□ -0.7
PVT1-213ENST00000522414 RRAGCQ9HB90 399 aa10.68□□□□□ -0.7
PVT1-213ENST00000522414 CEMIPQ8WUJ3 1361 aa10.67□□□□□ -0.7
PVT1-213ENST00000522414 TOMM70O94826 608 aa10.67□□□□□ -0.7
PVT1-213ENST00000522414 RASSF7Q02833 373 aa10.67□□□□□ -0.7
PVT1-213ENST00000522414 PTPRNQ16849 979 aa10.67□□□□□ -0.7
PVT1-213ENST00000522414 TTLL6Q8N841 843 aa10.67□□□□□ -0.7
PVT1-213ENST00000522414 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.7
PVT1-213ENST00000522414 KLF16Q9BXK1 252 aaPredicted RBP10.67□□□□□ -0.7
PVT1-213ENST00000522414 PCNTO95613 3336 aa10.67□□□□□ -0.7
PVT1-213ENST00000522414 DLEC1Q9Y238 1755 aa10.67□□□□□ -0.7
PVT1-213ENST00000522414 SCN7AQ01118 1682 aa10.66□□□□□ -0.7
PVT1-213ENST00000522414 CARMIL3Q8ND23 1372 aa10.66□□□□□ -0.7
PVT1-213ENST00000522414 CAMTA2O94983 1202 aa10.66□□□□□ -0.7
PVT1-213ENST00000522414 VSIG8P0DPA2 414 aa10.66□□□□□ -0.7
PVT1-213ENST00000522414 CLCN1P35523 988 aa10.66□□□□□ -0.7
PVT1-213ENST00000522414 PRR5LQ6MZQ0 368 aa10.66□□□□□ -0.7
PVT1-213ENST00000522414 ZNF511Q8NB15 262 aa10.66□□□□□ -0.7
PVT1-213ENST00000522414 SETDB2Q96T68 719 aa10.66□□□□□ -0.7
PVT1-213ENST00000522414 SNRPA1P09661 255 aaKnown RBP10.65□□□□□ -0.7
PVT1-213ENST00000522414 KCNH2Q12809 1159 aa10.65□□□□□ -0.7
PVT1-213ENST00000522414 TAF7Q15545 349 aaPredicted RBP10.65□□□□□ -0.7
PVT1-213ENST00000522414 NBPF10Q6P3W6 841 aaKnown RBP10.65□□□□□ -0.7
PVT1-213ENST00000522414 NPM2Q86SE8 214 aaKnown RBP10.65□□□□□ -0.7
PVT1-213ENST00000522414 DZIP3Q86Y13 1208 aaKnown RBP10.65□□□□□ -0.7
PVT1-213ENST00000522414 MPNDQ8N594 471 aa10.65□□□□□ -0.7
PVT1-213ENST00000522414 NBPF15Q8N660 670 aa10.65□□□□□ -0.7
PVT1-213ENST00000522414 BRIP1Q9BX63 1249 aa10.65□□□□□ -0.7
PVT1-213ENST00000522414 AFDNP55196 1824 aaKnown RBP10.65□□□□□ -0.71
PVT1-213ENST00000522414 C21orf2O43822 256 aa10.64□□□□□ -0.71
PVT1-213ENST00000522414 NDUFV2P19404 249 aa10.64□□□□□ -0.71
PVT1-213ENST00000522414 HTRA3P83110 453 aa10.64□□□□□ -0.71
PVT1-213ENST00000522414 KDM2BQ8NHM5 1336 aa10.63□□□□□ -0.71
PVT1-213ENST00000522414 NFKBIEO00221 500 aa10.63□□□□□ -0.71
PVT1-213ENST00000522414 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
PVT1-213ENST00000522414 LMNB1P20700 586 aa10.63□□□□□ -0.71
PVT1-213ENST00000522414 VARSP26640 1264 aaKnown RBP10.63□□□□□ -0.71
PVT1-213ENST00000522414 PDE6BP35913 854 aa10.63□□□□□ -0.71
PVT1-213ENST00000522414 WDR4P57081 412 aaKnown RBP10.63□□□□□ -0.71
PVT1-213ENST00000522414 C16orf71Q8IYS4 520 aaPredicted RBP10.63□□□□□ -0.71
PVT1-213ENST00000522414 NGEFQ8N5V2 710 aa10.63□□□□□ -0.71
PVT1-213ENST00000522414 DNAJC5GQ8N7S2 189 aa10.63□□□□□ -0.71
PVT1-213ENST00000522414 SPIRE2Q8WWL2 714 aa10.63□□□□□ -0.71
PVT1-213ENST00000522414 THUMPD2Q9BTF0 503 aaKnown RBP10.63□□□□□ -0.71
PVT1-213ENST00000522414 BCORQ6W2J9 1755 aa10.62□□□□□ -0.71
PVT1-213ENST00000522414 FAM177BA6PVY3 158 aa10.62□□□□□ -0.71
PVT1-213ENST00000522414 NPHP1O15259 732 aa10.62□□□□□ -0.71
PVT1-213ENST00000522414 GSK3AP49840 483 aa10.62□□□□□ -0.71
PVT1-213ENST00000522414 PLCB2Q00722 1185 aa10.62□□□□□ -0.71
PVT1-213ENST00000522414 SCARF1Q14162 830 aa10.62□□□□□ -0.71
PVT1-213ENST00000522414 HLFQ16534 295 aa10.62□□□□□ -0.71
PVT1-213ENST00000522414 CNBD1Q8NA66 436 aa10.62□□□□□ -0.71
PVT1-213ENST00000522414 PLEKHF1Q96S99 279 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms