RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 BCORQ6W2J9 1755 aa11.32□□□□□ -0.6
POLB-212ENST00000522297 HCLS1P14317 486 aaPredicted RBP11.32□□□□□ -0.6
POLB-212ENST00000522297 CCDC27Q2M243 656 aa11.32□□□□□ -0.6
POLB-212ENST00000522297 C16orf71Q8IYS4 520 aaPredicted RBP11.32□□□□□ -0.6
POLB-212ENST00000522297 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
POLB-212ENST00000522297 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
POLB-212ENST00000522297 NLRP3Q96P20 1036 aa11.32□□□□□ -0.6
POLB-212ENST00000522297 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
POLB-212ENST00000522297 TRMT112Q9UI30 125 aaKnown RBP11.32□□□□□ -0.6
POLB-212ENST00000522297 IBTKQ9P2D0 1353 aaPredicted RBP11.31□□□□□ -0.6
POLB-212ENST00000522297 GOLGA8CPA6NN73 597 aa11.31□□□□□ -0.6
POLB-212ENST00000522297 ATP5J2-PTCD1G3V325 749 aa11.31□□□□□ -0.6
POLB-212ENST00000522297 TCERG1O14776 1098 aaKnown RBP11.31□□□□□ -0.6
POLB-212ENST00000522297 VEGFAP15692 232 aaPredicted RBP11.31□□□□□ -0.6
POLB-212ENST00000522297 FKBP4Q02790 459 aaKnown RBP eCLIP11.31□□□□□ -0.6
POLB-212ENST00000522297 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
POLB-212ENST00000522297 TSR2Q969E8 191 aaKnown RBP11.31□□□□□ -0.6
POLB-212ENST00000522297 CRAMP1Q96RY5 1269 aa11.31□□□□□ -0.6
POLB-212ENST00000522297 PHAXQ9H814 394 aaKnown RBP11.31□□□□□ -0.6
POLB-212ENST00000522297 ZNF277Q9NRM2 450 aaPredicted RBP11.31□□□□□ -0.6
POLB-212ENST00000522297 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
POLB-212ENST00000522297 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
POLB-212ENST00000522297 POTECB2RU33 542 aa11.3□□□□□ -0.6
POLB-212ENST00000522297 SLC51AQ86UW1 340 aa11.3□□□□□ -0.6
POLB-212ENST00000522297 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
POLB-212ENST00000522297 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
POLB-212ENST00000522297 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
POLB-212ENST00000522297 TRIM28Q13263 835 aaKnown RBP11.29□□□□□ -0.6
POLB-212ENST00000522297 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
POLB-212ENST00000522297 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
POLB-212ENST00000522297 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
POLB-212ENST00000522297 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
POLB-212ENST00000522297 SH3TC1Q8TE82 1336 aa11.29□□□□□ -0.6
POLB-212ENST00000522297 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
POLB-212ENST00000522297 DLEC1Q9Y238 1755 aa11.28□□□□□ -0.6
POLB-212ENST00000522297 PPEF1O14829 653 aaPredicted RBP11.28□□□□□ -0.6
POLB-212ENST00000522297 BBOX1O75936 387 aa11.28□□□□□ -0.6
POLB-212ENST00000522297 HTRA3P83110 453 aa11.28□□□□□ -0.6
POLB-212ENST00000522297 FSTL1Q12841 308 aa11.28□□□□□ -0.6
POLB-212ENST00000522297 CCDC30Q5VVM6 783 aa11.28□□□□□ -0.6
POLB-212ENST00000522297 FAM9BQ8IZU0 186 aa11.28□□□□□ -0.6
POLB-212ENST00000522297 PSMD1Q99460 953 aa11.28□□□□□ -0.6
POLB-212ENST00000522297 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
POLB-212ENST00000522297 CHMP4AQ9BY43 222 aa11.28□□□□□ -0.6
POLB-212ENST00000522297 DAXXQ9UER7 740 aaPredicted RBP11.28□□□□□ -0.6
POLB-212ENST00000522297 SBF1O95248 1867 aa11.27□□□□□ -0.6
POLB-212ENST00000522297 RIC1Q4ADV7 1423 aa11.27□□□□□ -0.6
POLB-212ENST00000522297 IARSP41252 1262 aaKnown RBP11.27□□□□□ -0.61
POLB-212ENST00000522297 PDE4DQ08499 809 aa11.27□□□□□ -0.61
POLB-212ENST00000522297 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.61
POLB-212ENST00000522297 RTL5Q5HYW3 569 aaPredicted RBP11.27□□□□□ -0.61
POLB-212ENST00000522297 SAMD7Q7Z3H4 446 aa11.27□□□□□ -0.61
POLB-212ENST00000522297 WNT2BQ93097 391 aa11.27□□□□□ -0.61
POLB-212ENST00000522297 ATP6V0A2Q9Y487 856 aa11.27□□□□□ -0.61
POLB-212ENST00000522297 NUP98P52948 1817 aa11.27□□□□□ -0.61
POLB-212ENST00000522297 IL16Q14005 1332 aa11.27□□□□□ -0.61
POLB-212ENST00000522297 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
POLB-212ENST00000522297 CLCN1P35523 988 aa11.26□□□□□ -0.61
POLB-212ENST00000522297 SWT1Q5T5J6 900 aaKnown RBP11.26□□□□□ -0.61
POLB-212ENST00000522297 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
POLB-212ENST00000522297 WDR63Q8IWG1 891 aa11.26□□□□□ -0.61
POLB-212ENST00000522297 SMC1BQ8NDV3 1235 aa11.26□□□□□ -0.61
POLB-212ENST00000522297 ANKK1Q8NFD2 765 aa11.26□□□□□ -0.61
POLB-212ENST00000522297 MYD88Q99836 296 aa11.26□□□□□ -0.61
POLB-212ENST00000522297 TMX4Q9H1E5 349 aaPredicted RBP11.26□□□□□ -0.61
POLB-212ENST00000522297 ABCC4O15439 1325 aa11.26□□□□□ -0.61
POLB-212ENST00000522297 FZD9O00144 591 aa11.25□□□□□ -0.61
POLB-212ENST00000522297 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
POLB-212ENST00000522297 TWISTNBQ3B726 338 aaPredicted RBP11.25□□□□□ -0.61
POLB-212ENST00000522297 SP8Q8IXZ3 490 aa11.25□□□□□ -0.61
POLB-212ENST00000522297 JDP2Q8WYK2 163 aa11.25□□□□□ -0.61
POLB-212ENST00000522297 KLRG1Q96E93 195 aa11.25□□□□□ -0.61
POLB-212ENST00000522297 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
POLB-212ENST00000522297 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 SOWAHBA6NEL2 793 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 IRS4O14654 1257 aaPredicted RBP11.24□□□□□ -0.61
POLB-212ENST00000522297 DDX58O95786 925 aaKnown RBP11.24□□□□□ -0.61
POLB-212ENST00000522297 GRAPQ13588 217 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
POLB-212ENST00000522297 G2E3Q7L622 706 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 LARGE2Q8N3Y3 721 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 JMYQ8N9B5 988 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 ZBTB38Q8NAP3 1195 aaPredicted RBP11.24□□□□□ -0.61
POLB-212ENST00000522297 CCDC191Q8NCU4 936 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 GRAPLQ8TC17 118 aaPredicted RBP11.24□□□□□ -0.61
POLB-212ENST00000522297 NLRP7Q8WX94 980 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
POLB-212ENST00000522297 LRCH3Q96II8 777 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 METTL22Q9BUU2 404 aaPredicted RBP11.24□□□□□ -0.61
POLB-212ENST00000522297 STK31Q9BXU1 1019 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
POLB-212ENST00000522297 MAP3K2Q9Y2U5 619 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 ZNF541Q9H0D2 1346 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 SNED1Q8TER0 1413 aa11.24□□□□□ -0.61
POLB-212ENST00000522297 TNRC6CQ9HCJ0 1690 aaKnown RBP11.24□□□□□ -0.61
POLB-212ENST00000522297 FER1L6Q2WGJ9 1857 aa11.23□□□□□ -0.61
POLB-212ENST00000522297 VAMP4O75379 141 aa11.23□□□□□ -0.61
POLB-212ENST00000522297 KSR2Q6VAB6 950 aa11.23□□□□□ -0.61
POLB-212ENST00000522297 MPNDQ8N594 471 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms