RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 GMPSP49915 693 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-218ENST00000522222 FXR2P51116 673 aaKnown RBP eCLIP8.49□□□□□ -1.05
SPIDR-218ENST00000522222 CHRNDQ07001 517 aa8.49□□□□□ -1.05
SPIDR-218ENST00000522222 MKRN4PQ13434 485 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-218ENST00000522222 CCDC57Q2TAC2 916 aa8.49□□□□□ -1.05
SPIDR-218ENST00000522222 TAF7LQ5H9L4 462 aa8.49□□□□□ -1.05
SPIDR-218ENST00000522222 CIAPIN1Q6FI81 312 aa8.49□□□□□ -1.05
SPIDR-218ENST00000522222 ATF7IPQ6VMQ6 1270 aa8.49□□□□□ -1.05
SPIDR-218ENST00000522222 ARHGAP45Q92619 1136 aa8.49□□□□□ -1.05
SPIDR-218ENST00000522222 MEIS3Q99687 375 aa8.49□□□□□ -1.05
SPIDR-218ENST00000522222 ZNF646O15015 1829 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-218ENST00000522222 PSMD14O00487 310 aa8.48□□□□□ -1.05
SPIDR-218ENST00000522222 IPO8O15397 1037 aaKnown RBP8.48□□□□□ -1.05
SPIDR-218ENST00000522222 LMOD1P29536 600 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-218ENST00000522222 EPHX2P34913 555 aa8.48□□□□□ -1.05
SPIDR-218ENST00000522222 FSTL1Q12841 308 aa8.48□□□□□ -1.05
SPIDR-218ENST00000522222 INTS3Q68E01 1043 aaKnown RBP8.48□□□□□ -1.05
SPIDR-218ENST00000522222 SMC1BQ8NDV3 1235 aa8.48□□□□□ -1.05
SPIDR-218ENST00000522222 HELBQ8NG08 1087 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-218ENST00000522222 CLUAP1Q96AJ1 413 aa8.48□□□□□ -1.05
SPIDR-218ENST00000522222 ZC3H12CQ9C0D7 883 aaKnown RBP8.48□□□□□ -1.05
SPIDR-218ENST00000522222 ANKRD2Q9GZV1 360 aa8.48□□□□□ -1.05
SPIDR-218ENST00000522222 ZNF804BA4D1E1 1349 aa8.48□□□□□ -1.05
SPIDR-218ENST00000522222 ZNF609O15014 1411 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 SHTN1A0MZ66 631 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 SNAP23O00161 211 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 HSPA6P17066 643 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 PDE4AP27815 886 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 EPS15P42566 896 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 KCNJ4P48050 445 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 TNIP1Q15025 636 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 EAPPQ56P03 285 aaPredicted RBP8.47□□□□□ -1.05
SPIDR-218ENST00000522222 ZKSCAN2Q63HK3 967 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 LDHAL6AQ6ZMR3 332 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 TXNRD3Q86VQ6 643 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 LDHDQ86WU2 507 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 BACH2Q9BYV9 841 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 PUS3Q9BZE2 481 aaKnown RBP8.47□□□□□ -1.05
SPIDR-218ENST00000522222 KCNQ5Q9NR82 932 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 CNNM1Q9NRU3 951 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 GPRC5DQ9NZD1 345 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 LEMD3Q9Y2U8 911 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 LRRFIP2Q9Y608 721 aaKnown RBP8.47□□□□□ -1.05
SPIDR-218ENST00000522222 IRS2Q9Y4H2 1338 aa8.47□□□□□ -1.05
SPIDR-218ENST00000522222 G3V3G9 751 aa8.46□□□□□ -1.06
SPIDR-218ENST00000522222 TAF5LO75529 589 aa8.46□□□□□ -1.06
SPIDR-218ENST00000522222 RLBP1P12271 317 aa8.46□□□□□ -1.06
SPIDR-218ENST00000522222 RFX5P48382 616 aaPredicted RBP8.46□□□□□ -1.06
SPIDR-218ENST00000522222 DCAF8Q5TAQ9 597 aa8.46□□□□□ -1.06
SPIDR-218ENST00000522222 CHADLQ6NUI6 762 aa8.46□□□□□ -1.06
SPIDR-218ENST00000522222 TMEM57Q8N5G2 664 aa8.46□□□□□ -1.06
SPIDR-218ENST00000522222 KLHDC4Q8TBB5 520 aa8.46□□□□□ -1.06
SPIDR-218ENST00000522222 TRPM4Q8TD43 1214 aa8.46□□□□□ -1.06
SPIDR-218ENST00000522222 ZBTB12Q9Y330 459 aaPredicted RBP8.46□□□□□ -1.06
SPIDR-218ENST00000522222 PLIN1O60240 522 aa8.45□□□□□ -1.06
SPIDR-218ENST00000522222 GNAI3P08754 354 aa8.45□□□□□ -1.06
SPIDR-218ENST00000522222 LRRC24Q50LG9 513 aa8.45□□□□□ -1.06
SPIDR-218ENST00000522222 PNMA8AQ86V59 439 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-218ENST00000522222 MICALL2Q8IY33 904 aa8.45□□□□□ -1.06
SPIDR-218ENST00000522222 FTSJ3Q8IY81 847 aaKnown RBP8.45□□□□□ -1.06
SPIDR-218ENST00000522222 COA1Q9GZY4 146 aa8.45□□□□□ -1.06
SPIDR-218ENST00000522222 ADARB2Q9NS39 739 aaKnown RBP8.45□□□□□ -1.06
SPIDR-218ENST00000522222 RIPOR2Q9Y4F9 1068 aa8.45□□□□□ -1.06
SPIDR-218ENST00000522222 ARAP2Q8WZ64 1704 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 USP17L3A6NCW0 530 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 USP17L4A6NCW7 530 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 VIL1P09327 827 aaKnown RBP8.44□□□□□ -1.06
SPIDR-218ENST00000522222 RPS12P25398 132 aaKnown RBP8.44□□□□□ -1.06
SPIDR-218ENST00000522222 APLP1P51693 650 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 PDE3AQ14432 1141 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 METTL24Q5JXM2 366 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 MAP1SQ66K74 1059 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-218ENST00000522222 RSBN1LQ6PCB5 846 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-218ENST00000522222 C15orf52Q6ZUT6 534 aaKnown RBP8.44□□□□□ -1.06
SPIDR-218ENST00000522222 USP17L1Q7RTZ2 530 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 PODNQ7Z5L7 613 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 ITPRIPQ8IWB1 547 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 REM2Q8IYK8 340 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-218ENST00000522222 DZIP1LQ8IYY4 767 aaKnown RBP8.44□□□□□ -1.06
SPIDR-218ENST00000522222 VGLL2Q8N8G2 317 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 FBXW7Q969H0 707 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 CRBNQ96SW2 442 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 MROH5Q6ZUA9 1318 aa8.44□□□□□ -1.06
SPIDR-218ENST00000522222 EYA2O00167 538 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 EGFRP00533 1210 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 HTRA3P83110 453 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 PTPN12Q05209 780 aaKnown RBP8.43□□□□□ -1.06
SPIDR-218ENST00000522222 DACT2Q5SW24 774 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 USP50Q70EL3 339 aaPredicted RBP8.43□□□□□ -1.06
SPIDR-218ENST00000522222 ZNF804AQ7Z570 1209 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 PANK1Q8TE04 598 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 DPF2Q92785 391 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 GMLQ99445 158 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 MXD3Q9BW11 206 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 SIL1Q9H173 461 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 CNOT7Q9UIV1 285 aaKnown RBP8.43□□□□□ -1.06
SPIDR-218ENST00000522222 PA2G4Q9UQ80 394 aaKnown RBP8.43□□□□□ -1.06
SPIDR-218ENST00000522222 HDAC5Q9UQL6 1122 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 CLEC11AQ9Y240 323 aa8.43□□□□□ -1.06
SPIDR-218ENST00000522222 PASKQ96RG2 1323 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms