RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 LTBP1Q14766 1721 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 ARAP2Q8WZ64 1704 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 GSPT1P15170 499 aaKnown RBP16.38■□□□□ 0.21
CLK4-210ENST00000522136 PHKA1P46020 1223 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 GYG1P46976 350 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 BCAMP50895 628 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 TTC22Q5TAA0 569 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 TBC1D16Q8TBP0 767 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 GPATCH3Q96I76 525 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 TMX4Q9H1E5 349 aaPredicted RBP16.38■□□□□ 0.21
CLK4-210ENST00000522136 GGA1Q9UJY5 639 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 TTC41PQ6P2S7 1318 aa16.38■□□□□ 0.21
CLK4-210ENST00000522136 C6orf229H3BNL8 230 aa16.37■□□□□ 0.21
CLK4-210ENST00000522136 MAP4K4O95819 1239 aaPredicted RBP16.37■□□□□ 0.21
CLK4-210ENST00000522136 ATP2B4P23634 1241 aa16.37■□□□□ 0.21
CLK4-210ENST00000522136 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
CLK4-210ENST00000522136 DALRD3Q5D0E6 543 aaKnown RBP16.37■□□□□ 0.21
CLK4-210ENST00000522136 CCDC102BQ68D86 513 aa16.37■□□□□ 0.21
CLK4-210ENST00000522136 DPP8Q6V1X1 898 aaPredicted RBP16.37■□□□□ 0.21
CLK4-210ENST00000522136 NDUFB9Q9Y6M9 179 aa16.37■□□□□ 0.21
CLK4-210ENST00000522136 IRS2Q9Y4H2 1338 aa16.36■□□□□ 0.21
CLK4-210ENST00000522136 ATP5JP18859 108 aa16.36■□□□□ 0.21
CLK4-210ENST00000522136 CCDC158Q5M9N0 1113 aa16.36■□□□□ 0.21
CLK4-210ENST00000522136 TTC39AQ5SRH9 613 aa16.36■□□□□ 0.21
CLK4-210ENST00000522136 FAM84BQ96KN1 310 aaPredicted RBP16.36■□□□□ 0.21
CLK4-210ENST00000522136 DUOX1Q9NRD9 1551 aa16.36■□□□□ 0.21
CLK4-210ENST00000522136 AOX1Q06278 1338 aa16.36■□□□□ 0.21
CLK4-210ENST00000522136 ERC2O15083 957 aa16.35■□□□□ 0.21
CLK4-210ENST00000522136 GLRX3O76003 335 aaKnown RBP16.35■□□□□ 0.21
CLK4-210ENST00000522136 SCARF1Q14162 830 aa16.35■□□□□ 0.21
CLK4-210ENST00000522136 SYT17Q9BSW7 474 aa16.35■□□□□ 0.21
CLK4-210ENST00000522136 BCS1LQ9Y276 419 aa16.35■□□□□ 0.21
CLK4-210ENST00000522136 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
CLK4-210ENST00000522136 SNED1Q8TER0 1413 aa16.34■□□□□ 0.21
CLK4-210ENST00000522136 RIMBP2O15034 1052 aa16.34■□□□□ 0.21
CLK4-210ENST00000522136 PI16Q6UXB8 463 aa16.34■□□□□ 0.21
CLK4-210ENST00000522136 EDC3Q96F86 508 aaKnown RBP16.34■□□□□ 0.21
CLK4-210ENST00000522136 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
CLK4-210ENST00000522136 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.21
CLK4-210ENST00000522136 CAVIN4Q5BKX8 364 aa16.33■□□□□ 0.21
CLK4-210ENST00000522136 BMP2KLQ5H9B9 411 aa16.33■□□□□ 0.21
CLK4-210ENST00000522136 FBXO33Q7Z6M2 555 aa16.33■□□□□ 0.21
CLK4-210ENST00000522136 SDSP20132 328 aa16.33■□□□□ 0.2
CLK4-210ENST00000522136 MCAMP43121 646 aa16.33■□□□□ 0.2
CLK4-210ENST00000522136 CCDC93Q567U6 631 aa16.33■□□□□ 0.2
CLK4-210ENST00000522136 CC2D2BQ6DHV5 1058 aa16.33■□□□□ 0.2
CLK4-210ENST00000522136 VPS37DQ86XT2 251 aa16.33■□□□□ 0.2
CLK4-210ENST00000522136 DNAJC2Q99543 621 aaKnown RBP16.33■□□□□ 0.2
CLK4-210ENST00000522136 TRIM6-TRIM34B2RNG4 842 aa16.32■□□□□ 0.2
CLK4-210ENST00000522136 ARID4AP29374 1257 aaPredicted RBP16.32■□□□□ 0.2
CLK4-210ENST00000522136 HIBADHP31937 336 aaKnown RBP16.32■□□□□ 0.2
CLK4-210ENST00000522136 C15orf52Q6ZUT6 534 aaKnown RBP16.32■□□□□ 0.2
CLK4-210ENST00000522136 RILPL2Q969X0 211 aa16.32■□□□□ 0.2
CLK4-210ENST00000522136 FKBP4Q02790 459 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLK4-210ENST00000522136 RASGRF1Q13972 1273 aa16.31■□□□□ 0.2
CLK4-210ENST00000522136 HAUS7Q99871 368 aa16.31■□□□□ 0.2
CLK4-210ENST00000522136 RTFDC1Q9BY42 306 aaPredicted RBP16.31■□□□□ 0.2
CLK4-210ENST00000522136 UQCRFS1P1P0C7P4 283 aa16.31■□□□□ 0.2
CLK4-210ENST00000522136 ZAP70P43403 619 aa16.31■□□□□ 0.2
CLK4-210ENST00000522136 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
CLK4-210ENST00000522136 RTKN2Q8IZC4 609 aa16.31■□□□□ 0.2
CLK4-210ENST00000522136 ZNF512BQ96KM6 892 aaPredicted RBP16.31■□□□□ 0.2
CLK4-210ENST00000522136 ZC3H12CQ9C0D7 883 aaKnown RBP16.31■□□□□ 0.2
CLK4-210ENST00000522136 HMG20BQ9P0W2 317 aa16.31■□□□□ 0.2
CLK4-210ENST00000522136 MED23Q9ULK4 1368 aa16.31■□□□□ 0.2
CLK4-210ENST00000522136 GOLGB1Q14789 3259 aaKnown RBP16.3■□□□□ 0.2
CLK4-210ENST00000522136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLK4-210ENST00000522136 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
CLK4-210ENST00000522136 AK9Q5TCS8 1911 aa16.3■□□□□ 0.2
CLK4-210ENST00000522136 GOLIM4O00461 696 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 DOK7Q18PE1 504 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 ZNF804AQ7Z570 1209 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 CHD4Q14839 1912 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 AOC3Q16853 763 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 SPATA5Q8NB90 893 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 EYA3Q99504 573 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 CD209Q9NNX6 404 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 GNL3LQ9NVN8 582 aaKnown RBP16.29■□□□□ 0.2
CLK4-210ENST00000522136 FER1L6Q2WGJ9 1857 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 ARFGEF1Q9Y6D6 1849 aa16.29■□□□□ 0.2
CLK4-210ENST00000522136 COL1A1P02452 1464 aaPredicted RBP16.28■□□□□ 0.2
CLK4-210ENST00000522136 MYH13Q9UKX3 1938 aa16.28■□□□□ 0.2
CLK4-210ENST00000522136 MYO5AQ9Y4I1 1855 aaKnown RBP16.28■□□□□ 0.2
CLK4-210ENST00000522136 FRAT2O75474 233 aaPredicted RBP16.28■□□□□ 0.2
CLK4-210ENST00000522136 SOGA3Q5TF21 947 aa16.28■□□□□ 0.2
CLK4-210ENST00000522136 ZNF277Q9NRM2 450 aaPredicted RBP16.28■□□□□ 0.2
CLK4-210ENST00000522136 PAG1Q9NWQ8 432 aa16.28■□□□□ 0.2
CLK4-210ENST00000522136 JAG2Q9Y219 1238 aa16.28■□□□□ 0.2
CLK4-210ENST00000522136 CYP2E1P05181 493 aaPredicted RBP16.27■□□□□ 0.2
CLK4-210ENST00000522136 GRIPAP1Q4V328 841 aa16.27■□□□□ 0.2
CLK4-210ENST00000522136 TBC1D9Q6ZT07 1266 aa16.27■□□□□ 0.2
CLK4-210ENST00000522136 CNTROBQ8N137 903 aa16.27■□□□□ 0.2
CLK4-210ENST00000522136 TDRD7Q8NHU6 1098 aaKnown RBP16.27■□□□□ 0.2
CLK4-210ENST00000522136 PSMD1Q99460 953 aa16.27■□□□□ 0.2
CLK4-210ENST00000522136 SRCAPQ6ZRS2 3230 aa16.27■□□□□ 0.2
CLK4-210ENST00000522136 NFKBIEO00221 500 aa16.27■□□□□ 0.19
CLK4-210ENST00000522136 CHAF1AQ13111 956 aaPredicted RBP16.27■□□□□ 0.19
CLK4-210ENST00000522136 SUPT20HQ8NEM7 779 aa16.27■□□□□ 0.19
CLK4-210ENST00000522136 EVI5LQ96CN4 794 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 295.6 ms