RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 POLA2Q14181 598 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 GPR161Q8N6U8 529 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 MAP4K1Q92918 833 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 CHMP4CQ96CF2 233 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 GOLPH3LQ9H4A5 285 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 PSD3Q9NYI0 1048 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 TNRQ92752 1358 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 AMPHP49418 695 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 FAM160A1Q05DH4 1040 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 TOB2Q14106 344 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 FMNL2Q96PY5 1086 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 SDF4Q9BRK5 362 aa11.15□□□□□ -0.62
CTNNA1-230ENST00000521724 A0A1B0GUL7 405 aa11.15□□□□□ -0.63
CTNNA1-230ENST00000521724 RPS6KB1P23443 525 aa11.15□□□□□ -0.63
CTNNA1-230ENST00000521724 HSP90AB4PQ58FF6 505 aa11.15□□□□□ -0.63
CTNNA1-230ENST00000521724 TRIM65Q6PJ69 517 aa11.15□□□□□ -0.63
CTNNA1-230ENST00000521724 CLASRPQ8N2M8 674 aaKnown RBP11.15□□□□□ -0.63
CTNNA1-230ENST00000521724 PARP3Q9Y6F1 533 aa11.15□□□□□ -0.63
CTNNA1-230ENST00000521724 XRN1Q8IZH2 1706 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 USHBP1Q8N6Y0 703 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 FUT8Q9BYC5 575 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 FTOQ9C0B1 505 aaKnown RBP eCLIP11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 JRKLQ9Y4A0 524 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 KIF13AQ9H1H9 1805 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 IGSF1Q8N6C5 1336 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 LOC102724159A0A0B4J2E5 919 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 IVLP07476 585 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 CHRM1P11229 460 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 PWP2Q15269 919 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 GPATCH3Q96I76 525 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 FAM227BQ96M60 508 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 ECHDC1Q9NTX5 307 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 RCOR1Q9UKL0 485 aa11.14□□□□□ -0.63
CTNNA1-230ENST00000521724 KDRP35968 1356 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 ME1P48163 572 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 TTC31Q49AM3 519 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 FSIP1Q8NA03 581 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 IQUBQ8NA54 791 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 NGDNQ8NEJ9 315 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 EVI5LQ96CN4 794 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 PARD6BQ9BYG5 372 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 BRMS1Q9HCU9 246 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 USP42Q9H9J4 1324 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 PLEKHG2Q9H7P9 1386 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 CACNA1FO60840 1977 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 FANCGO15287 622 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 HDGFP51858 240 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 ENGASEQ8NFI3 743 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 RBM33Q96EV2 1170 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 UTP14AQ9BVJ6 771 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 TOMM22Q9NS69 142 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 AMOTL2Q9Y2J4 779 aa11.13□□□□□ -0.63
CTNNA1-230ENST00000521724 NALCNQ8IZF0 1738 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 CRYBG1Q9Y4K1 1723 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 MAGEA9P43362 315 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 DPCR1Q3MIW9 517 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 SECISBP2LQ93073 1101 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 VPS18Q9P253 973 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 FLT4P35916 1363 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 RGPD8O14715 1765 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 H3BQF6 201 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 ANXA1P04083 346 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 GUCY2CP25092 1073 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 ADD1P35611 737 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 FOSBP53539 338 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 NLRP6P59044 892 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 PSME1Q06323 249 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 NMIQ13287 307 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 MPHOSPH8Q99549 860 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 ALDH8A1Q9H2A2 487 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 TAF6LQ9Y6J9 622 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 SBNO1A3KN83 1393 aa11.12□□□□□ -0.63
CTNNA1-230ENST00000521724 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 HIP1O00291 1037 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 ZSCAN12O43309 604 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 NBPF7P0C2Y1 421 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 PPP2R3AQ06190 1150 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 LONRF2Q1L5Z9 754 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 USP28Q96RU2 1077 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 MYCBPQ99417 103 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 TOPAZ1Q8N9V7 1692 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 KCNQ3O43525 872 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 LMOD1P29536 600 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 PACS2Q86VP3 889 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 RABGGTAQ92696 567 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 NCAPGQ9BPX3 1015 aa11.11□□□□□ -0.63
CTNNA1-230ENST00000521724 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 MCM6Q14566 821 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 JAKMIP3Q5VZ66 844 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 DRC1Q96MC2 740 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 ZNF396Q96N95 335 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 DEF6Q9H4E7 631 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 CCDC151A5D8V7 595 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 EIF3CLB5ME19 914 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 BIN1O00499 593 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 HOXC9P31274 260 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 GNG11P61952 73 aa11.1□□□□□ -0.63
CTNNA1-230ENST00000521724 MAP3K9P80192 1104 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms