RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 IGSF3O75054 1194 aa11.81□□□□□ -0.52
CLK4-209ENST00000521621 PDE8BO95263 885 aa11.81□□□□□ -0.52
CLK4-209ENST00000521621 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
CLK4-209ENST00000521621 FTSJ3Q8IY81 847 aaKnown RBP11.81□□□□□ -0.52
CLK4-209ENST00000521621 C16orf71Q8IYS4 520 aaPredicted RBP11.81□□□□□ -0.52
CLK4-209ENST00000521621 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
CLK4-209ENST00000521621 DDX19BQ9UMR2 479 aa11.81□□□□□ -0.52
CLK4-209ENST00000521621 PDS5AQ29RF7 1337 aaKnown RBP11.8□□□□□ -0.52
CLK4-209ENST00000521621 LMOD1P29536 600 aaPredicted RBP11.8□□□□□ -0.52
CLK4-209ENST00000521621 EPHX2P34913 555 aa11.8□□□□□ -0.52
CLK4-209ENST00000521621 ATP8B2P98198 1209 aa11.8□□□□□ -0.52
CLK4-209ENST00000521621 ZNF804AQ7Z570 1209 aa11.8□□□□□ -0.52
CLK4-209ENST00000521621 USP17L3A6NCW0 530 aa11.8□□□□□ -0.52
CLK4-209ENST00000521621 USP17L4A6NCW7 530 aa11.8□□□□□ -0.52
CLK4-209ENST00000521621 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
CLK4-209ENST00000521621 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
CLK4-209ENST00000521621 USP17L1Q7RTZ2 530 aa11.8□□□□□ -0.52
CLK4-209ENST00000521621 FBXO33Q7Z6M2 555 aa11.8□□□□□ -0.52
CLK4-209ENST00000521621 GPR108Q9NPR9 543 aa11.8□□□□□ -0.52
CLK4-209ENST00000521621 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
CLK4-209ENST00000521621 RLBP1P12271 317 aa11.79□□□□□ -0.52
CLK4-209ENST00000521621 PUM3Q15397 648 aaKnown RBP11.79□□□□□ -0.52
CLK4-209ENST00000521621 CHADLQ6NUI6 762 aa11.79□□□□□ -0.52
CLK4-209ENST00000521621 CHMP3Q9Y3E7 222 aa11.79□□□□□ -0.52
CLK4-209ENST00000521621 DACT2Q5SW24 774 aa11.79□□□□□ -0.52
CLK4-209ENST00000521621 TDRD7Q8NHU6 1098 aaKnown RBP11.79□□□□□ -0.52
CLK4-209ENST00000521621 ZNF594Q96JF6 807 aaPredicted RBP11.79□□□□□ -0.52
CLK4-209ENST00000521621 PSMD14O00487 310 aa11.79□□□□□ -0.52
CLK4-209ENST00000521621 AAMPQ13685 434 aa11.79□□□□□ -0.52
CLK4-209ENST00000521621 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
CLK4-209ENST00000521621 CD209Q9NNX6 404 aa11.79□□□□□ -0.52
CLK4-209ENST00000521621 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
CLK4-209ENST00000521621 PASKQ96RG2 1323 aa11.78□□□□□ -0.52
CLK4-209ENST00000521621 SEMA3EO15041 775 aa11.78□□□□□ -0.52
CLK4-209ENST00000521621 GMPSP49915 693 aaPredicted RBP11.78□□□□□ -0.52
CLK4-209ENST00000521621 LPIN2Q92539 896 aa11.78□□□□□ -0.52
CLK4-209ENST00000521621 PUS3Q9BZE2 481 aaKnown RBP11.78□□□□□ -0.52
CLK4-209ENST00000521621 DBNDD1Q9H9R9 158 aa11.78□□□□□ -0.52
CLK4-209ENST00000521621 SUGT1Q9Y2Z0 365 aa11.78□□□□□ -0.52
CLK4-209ENST00000521621 COL1A1P02452 1464 aaPredicted RBP11.78□□□□□ -0.52
CLK4-209ENST00000521621 KCNJ4P48050 445 aa11.78□□□□□ -0.52
CLK4-209ENST00000521621 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
CLK4-209ENST00000521621 MRIQ9BWK5 157 aa11.78□□□□□ -0.52
CLK4-209ENST00000521621 ZBTB40Q9NUA8 1239 aa11.78□□□□□ -0.52
CLK4-209ENST00000521621 MYH13Q9UKX3 1938 aa11.77□□□□□ -0.52
CLK4-209ENST00000521621 PITPNM2Q9BZ72 1349 aa11.77□□□□□ -0.52
CLK4-209ENST00000521621 RIMBP2O15034 1052 aa11.77□□□□□ -0.53
CLK4-209ENST00000521621 LRRC24Q50LG9 513 aa11.77□□□□□ -0.53
CLK4-209ENST00000521621 SASH1O94885 1247 aa11.77□□□□□ -0.53
CLK4-209ENST00000521621 HSPA6P17066 643 aa11.77□□□□□ -0.53
CLK4-209ENST00000521621 METTL24Q5JXM2 366 aa11.77□□□□□ -0.53
CLK4-209ENST00000521621 FAM84BQ96KN1 310 aaPredicted RBP11.77□□□□□ -0.53
CLK4-209ENST00000521621 AKAP2Q9Y2D5 859 aa11.77□□□□□ -0.53
CLK4-209ENST00000521621 TRPM7Q96QT4 1865 aa11.77□□□□□ -0.53
CLK4-209ENST00000521621 H7C1D1 291 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 DOK7Q18PE1 504 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 TXNRD3Q86VQ6 643 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
CLK4-209ENST00000521621 ZBED3Q96IU2 234 aaPredicted RBP11.76□□□□□ -0.53
CLK4-209ENST00000521621 SALL1Q9NSC2 1324 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 G3V3G9 751 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 SRGAP3O43295 1099 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
CLK4-209ENST00000521621 APLP1P51693 650 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 ITPRIPQ8IWB1 547 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 CNOT7Q9UIV1 285 aaKnown RBP11.76□□□□□ -0.53
CLK4-209ENST00000521621 GJA3Q9Y6H8 435 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 THSD7BQ9C0I4 1608 aa11.76□□□□□ -0.53
CLK4-209ENST00000521621 TAF5LO75529 589 aa11.75□□□□□ -0.53
CLK4-209ENST00000521621 RAD17O75943 681 aa11.75□□□□□ -0.53
CLK4-209ENST00000521621 SLC5A1P13866 664 aa11.75□□□□□ -0.53
CLK4-209ENST00000521621 HIBADHP31937 336 aaKnown RBP11.75□□□□□ -0.53
CLK4-209ENST00000521621 CLUAP1Q96AJ1 413 aa11.75□□□□□ -0.53
CLK4-209ENST00000521621 CEP126Q9P2H0 1117 aa11.75□□□□□ -0.53
CLK4-209ENST00000521621 ITGBL1O95965 494 aaPredicted RBP11.75□□□□□ -0.53
CLK4-209ENST00000521621 HDLBPQ00341 1268 aaKnown RBP11.75□□□□□ -0.53
CLK4-209ENST00000521621 CAVIN4Q5BKX8 364 aa11.75□□□□□ -0.53
CLK4-209ENST00000521621 CEP85Q6P2H3 762 aa11.75□□□□□ -0.53
CLK4-209ENST00000521621 TBC1D22AQ8WUA7 517 aa11.75□□□□□ -0.53
CLK4-209ENST00000521621 ZNF512BQ96KM6 892 aaPredicted RBP11.75□□□□□ -0.53
CLK4-209ENST00000521621 KLRK1P26718 216 aa11.74□□□□□ -0.53
CLK4-209ENST00000521621 EPS15P42566 896 aa11.74□□□□□ -0.53
CLK4-209ENST00000521621 GPR101Q96P66 508 aaPredicted RBP11.74□□□□□ -0.53
CLK4-209ENST00000521621 WTIPA6NIX2 430 aaPredicted RBP11.74□□□□□ -0.53
CLK4-209ENST00000521621 USP17L8P0C7I0 530 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 HSP90AB4PQ58FF6 505 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 MICALL2Q8IY33 904 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 PANK1Q8TE04 598 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 TTLL5Q6EMB2 1281 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 TMED8Q6PL24 325 aaPredicted RBP11.73□□□□□ -0.53
CLK4-209ENST00000521621 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 KCNQ5Q9NR82 932 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 MAST2Q6P0Q8 1798 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 LAMB1P07942 1786 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 RRP1P56182 461 aaKnown RBP11.73□□□□□ -0.53
CLK4-209ENST00000521621 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
CLK4-209ENST00000521621 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
CLK4-209ENST00000521621 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms