RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DEAF1O75398 565 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-209ENST00000521559 TNFRSF21O75509 655 aa5.97□□□□□ -1.45
VPS13B-209ENST00000521559 PDE3BQ13370 1112 aa5.97□□□□□ -1.45
VPS13B-209ENST00000521559 GJD3Q8N144 294 aa5.97□□□□□ -1.45
VPS13B-209ENST00000521559 WFDC12Q8WWY7 111 aa5.97□□□□□ -1.45
VPS13B-209ENST00000521559 ADAM19Q9H013 955 aa5.97□□□□□ -1.45
VPS13B-209ENST00000521559 TUT1Q9H6E5 874 aaKnown RBP5.97□□□□□ -1.45
VPS13B-209ENST00000521559 TPSG1Q9NRR2 321 aa5.97□□□□□ -1.45
VPS13B-209ENST00000521559 A6NHS1 94 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 LINC01387J3KSC0 135 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 SERPINB4P48594 390 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 SETDB1Q15047 1291 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 TXNDC2Q86VQ3 553 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 TMEM130Q8N3G9 435 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 KLHL23Q8NBE8 558 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 WNT8BQ93098 351 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 CITED4Q96RK1 184 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 SEMA6BQ9H3T3 888 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 CCDC87Q9NVE4 849 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 DZANK1Q9NVP4 752 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 AMOTL2Q9Y2J4 779 aa5.96□□□□□ -1.46
VPS13B-209ENST00000521559 PDE2AO00408 941 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-209ENST00000521559 H2AFB1P0C5Y9 115 aa5.95□□□□□ -1.46
VPS13B-209ENST00000521559 H2AFB2P0C5Z0 115 aa5.95□□□□□ -1.46
VPS13B-209ENST00000521559 IREB2P48200 963 aaKnown RBP5.95□□□□□ -1.46
VPS13B-209ENST00000521559 ARL4DP49703 201 aa5.95□□□□□ -1.46
VPS13B-209ENST00000521559 TMEM102Q8N9M5 508 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-209ENST00000521559 POP1Q99575 1024 aaKnown RBP5.95□□□□□ -1.46
VPS13B-209ENST00000521559 CHRDQ9H2X0 955 aa5.95□□□□□ -1.46
VPS13B-209ENST00000521559 AKTIPQ9H8T0 292 aa5.95□□□□□ -1.46
VPS13B-209ENST00000521559 H3BRJ5 948 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 FSCN2O14926 492 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 EIF4EBP3O60516 100 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-209ENST00000521559 BRD1O95696 1058 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 CD68P34810 354 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-209ENST00000521559 PIP4K2BP78356 416 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 RSPO4Q2I0M5 234 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-209ENST00000521559 NKAPLQ5M9Q1 402 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 TP53INP1Q96A56 240 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 OSMRQ99650 979 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 ZFYVE28Q9HCC9 887 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 OSGEPQ9NPF4 335 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 SEC31BQ9NQW1 1179 aa5.94□□□□□ -1.46
VPS13B-209ENST00000521559 EREGO14944 169 aa5.93□□□□□ -1.46
VPS13B-209ENST00000521559 NOS3P29474 1203 aa5.93□□□□□ -1.46
VPS13B-209ENST00000521559 BSNDQ8WZ55 320 aa5.93□□□□□ -1.46
VPS13B-209ENST00000521559 FOXD3Q9UJU5 478 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-209ENST00000521559 ZCCHC6Q5VYS8 1495 aaKnown RBP5.92□□□□□ -1.46
VPS13B-209ENST00000521559 F8W735 103 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-209ENST00000521559 NFKBIEO00221 500 aa5.92□□□□□ -1.46
VPS13B-209ENST00000521559 DYRK3O43781 588 aa5.92□□□□□ -1.46
VPS13B-209ENST00000521559 EPHA1P21709 976 aa5.92□□□□□ -1.46
VPS13B-209ENST00000521559 CDC25BP30305 580 aa5.92□□□□□ -1.46
VPS13B-209ENST00000521559 TMC1Q8TDI8 760 aa5.92□□□□□ -1.46
VPS13B-209ENST00000521559 NXPE3Q969Y0 559 aa5.92□□□□□ -1.46
VPS13B-209ENST00000521559 SSBP4Q9BWG4 385 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-209ENST00000521559 SH2B1Q9NRF2 756 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-209ENST00000521559 ARHGAP4P98171 946 aa5.91□□□□□ -1.46
VPS13B-209ENST00000521559 DUOXA2Q1HG44 320 aa5.91□□□□□ -1.46
VPS13B-209ENST00000521559 TXNDC11Q6PKC3 985 aa5.91□□□□□ -1.46
VPS13B-209ENST00000521559 GALNT11Q8NCW6 608 aa5.91□□□□□ -1.46
VPS13B-209ENST00000521559 ZKSCAN3Q9BRR0 538 aa5.91□□□□□ -1.46
VPS13B-209ENST00000521559 CEP41Q9BYV8 373 aa5.91□□□□□ -1.46
VPS13B-209ENST00000521559 GNEQ9Y223 722 aaKnown RBP5.91□□□□□ -1.46
VPS13B-209ENST00000521559 ACPPP15309 386 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 GLB1P16278 677 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 C19orf57Q0VDD7 668 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 IKBKEQ14164 716 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 ECM1Q16610 540 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 ACAD11Q709F0 780 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.9□□□□□ -1.46
VPS13B-209ENST00000521559 GALNT12Q8IXK2 581 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 DZIP1LQ8IYY4 767 aaKnown RBP5.9□□□□□ -1.46
VPS13B-209ENST00000521559 DMRTB1Q96MA1 342 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 CARD10Q9BWT7 1032 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 BHLHE41Q9C0J9 482 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-209ENST00000521559 SOX13Q9UN79 622 aa5.9□□□□□ -1.46
VPS13B-209ENST00000521559 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-209ENST00000521559 CPNE3O75131 537 aaKnown RBP5.89□□□□□ -1.47
VPS13B-209ENST00000521559 TRPA1O75762 1119 aa5.89□□□□□ -1.47
VPS13B-209ENST00000521559 FOXD4L6Q3SYB3 417 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-209ENST00000521559 FOXD4L3Q6VB84 417 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-209ENST00000521559 SLC51AQ86UW1 340 aa5.89□□□□□ -1.47
VPS13B-209ENST00000521559 ASAP3Q8TDY4 903 aa5.89□□□□□ -1.47
VPS13B-209ENST00000521559 SLC7A3Q8WY07 619 aa5.89□□□□□ -1.47
VPS13B-209ENST00000521559 KLHDC7BQ96G42 594 aa5.89□□□□□ -1.47
VPS13B-209ENST00000521559 MEGF10Q96KG7 1140 aa5.89□□□□□ -1.47
VPS13B-209ENST00000521559 FAM129BQ96TA1 746 aa5.89□□□□□ -1.47
VPS13B-209ENST00000521559 DNAJC25Q9H1X3 360 aa5.89□□□□□ -1.47
VPS13B-209ENST00000521559 BIN2Q9UBW5 565 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-209ENST00000521559 SOWAHDA6NJG2 315 aa5.88□□□□□ -1.47
VPS13B-209ENST00000521559 PATL2C9JE40 543 aaKnown RBP5.88□□□□□ -1.47
VPS13B-209ENST00000521559 ALX3O95076 343 aa5.88□□□□□ -1.47
VPS13B-209ENST00000521559 UVSSAQ2YD98 709 aa5.88□□□□□ -1.47
VPS13B-209ENST00000521559 PRSS36Q5K4E3 855 aa5.88□□□□□ -1.47
VPS13B-209ENST00000521559 Q6ZS46 218 aa5.88□□□□□ -1.47
VPS13B-209ENST00000521559 HHIPQ96QV1 700 aa5.88□□□□□ -1.47
VPS13B-209ENST00000521559 RBCK1Q9BYM8 510 aa5.88□□□□□ -1.47
VPS13B-209ENST00000521559 SOX17Q9H6I2 414 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-209ENST00000521559 MYO15BQ96JP2 1530 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms