RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SPINK5Q9NQ38 1064 aaPredicted RBP25.07■■□□□ 1.6
PABPC1-215ENST00000520804 ASTN2O75129 1339 aaPredicted RBP25.07■■□□□ 1.6
PABPC1-215ENST00000520804 USP17L8P0C7I0 530 aa25.06■■□□□ 1.6
PABPC1-215ENST00000520804 FAM161AQ3B820 660 aa25.06■■□□□ 1.6
PABPC1-215ENST00000520804 SULF1Q8IWU6 871 aa25.06■■□□□ 1.6
PABPC1-215ENST00000520804 GBA2Q9HCG7 927 aaPredicted RBP25.06■■□□□ 1.6
PABPC1-215ENST00000520804 LEMD3Q9Y2U8 911 aa25.06■■□□□ 1.6
PABPC1-215ENST00000520804 BRPF1P55201 1214 aaPredicted RBP25.05■■□□□ 1.6
PABPC1-215ENST00000520804 SCARF1Q14162 830 aa25.04■■□□□ 1.6
PABPC1-215ENST00000520804 C2orf69Q8N8R5 385 aa25.04■■□□□ 1.6
PABPC1-215ENST00000520804 MPHOSPH8Q99549 860 aa25.04■■□□□ 1.6
PABPC1-215ENST00000520804 MYOZ2Q9NPC6 264 aa25.04■■□□□ 1.6
PABPC1-215ENST00000520804 CA12O43570 354 aa25.03■■□□□ 1.6
PABPC1-215ENST00000520804 NOGQ13253 232 aa25.03■■□□□ 1.6
PABPC1-215ENST00000520804 ANGEL2Q5VTE6 544 aaKnown RBP25.03■■□□□ 1.6
PABPC1-215ENST00000520804 FAM9BQ8IZU0 186 aa25.03■■□□□ 1.6
PABPC1-215ENST00000520804 ANKRD2Q9GZV1 360 aa25.03■■□□□ 1.6
PABPC1-215ENST00000520804 COA1Q9GZY4 146 aa25.03■■□□□ 1.6
PABPC1-215ENST00000520804 F6X3S4 739 aa25.02■■□□□ 1.6
PABPC1-215ENST00000520804 DACT2Q5SW24 774 aa25.02■■□□□ 1.6
PABPC1-215ENST00000520804 RGMBQ6NW40 437 aa25.02■■□□□ 1.6
PABPC1-215ENST00000520804 TXNRD3Q86VQ6 643 aa25.02■■□□□ 1.6
PABPC1-215ENST00000520804 CDCA5Q96FF9 252 aa25.02■■□□□ 1.6
PABPC1-215ENST00000520804 TSKSQ9UJT2 592 aa25.02■■□□□ 1.6
PABPC1-215ENST00000520804 ZNF804BA4D1E1 1349 aa25.02■■□□□ 1.6
PABPC1-215ENST00000520804 ZNF646O15015 1829 aaPredicted RBP25.02■■□□□ 1.6
PABPC1-215ENST00000520804 BEND3Q5T5X7 828 aa25.01■■□□□ 1.59
PABPC1-215ENST00000520804 ANKRD18BA2A2Z9 1011 aa25■■□□□ 1.59
PABPC1-215ENST00000520804 STRIP1Q5VSL9 837 aa25■■□□□ 1.59
PABPC1-215ENST00000520804 ZIC5Q96T25 663 aa25■■□□□ 1.59
PABPC1-215ENST00000520804 MXD3Q9BW11 206 aa25■■□□□ 1.59
PABPC1-215ENST00000520804 FAM155AB1AL88 458 aaPredicted RBP24.99■■□□□ 1.59
PABPC1-215ENST00000520804 FOXO4P98177 505 aa24.99■■□□□ 1.59
PABPC1-215ENST00000520804 MYO3BQ8WXR4 1341 aa24.99■■□□□ 1.59
PABPC1-215ENST00000520804 PITPNM2Q9BZ72 1349 aa24.99■■□□□ 1.59
PABPC1-215ENST00000520804 KLRK1P26718 216 aa24.98■■□□□ 1.59
PABPC1-215ENST00000520804 CHRNDQ07001 517 aa24.98■■□□□ 1.59
PABPC1-215ENST00000520804 FBXW7Q969H0 707 aa24.98■■□□□ 1.59
PABPC1-215ENST00000520804 CCDC102AQ96A19 550 aa24.98■■□□□ 1.59
PABPC1-215ENST00000520804 OGFOD1Q8N543 542 aa24.97■■□□□ 1.59
PABPC1-215ENST00000520804 KCNJ4P48050 445 aa24.96■■□□□ 1.59
PABPC1-215ENST00000520804 ZNF157P51786 506 aaPredicted RBP24.96■■□□□ 1.59
PABPC1-215ENST00000520804 IFIT5Q13325 482 aaKnown RBP24.96■■□□□ 1.59
PABPC1-215ENST00000520804 ABHD8Q96I13 439 aa24.96■■□□□ 1.59
PABPC1-215ENST00000520804 NBPF9Q3BBW0 867 aa24.95■■□□□ 1.58
PABPC1-215ENST00000520804 TTLL5Q6EMB2 1281 aa24.95■■□□□ 1.58
PABPC1-215ENST00000520804 GRM8O00222 908 aa24.94■■□□□ 1.58
PABPC1-215ENST00000520804 MMP14P50281 582 aa24.94■■□□□ 1.58
PABPC1-215ENST00000520804 CHMP3Q9Y3E7 222 aa24.94■■□□□ 1.58
PABPC1-215ENST00000520804 A0A1B0GUL6 1792 aa24.93■■□□□ 1.58
PABPC1-215ENST00000520804 ZNF521Q96K83 1311 aa24.93■■□□□ 1.58
PABPC1-215ENST00000520804 WNT10BO00744 389 aa24.93■■□□□ 1.58
PABPC1-215ENST00000520804 SLC10A3P09131 477 aa24.93■■□□□ 1.58
PABPC1-215ENST00000520804 FKBP1BP68106 108 aa24.93■■□□□ 1.58
PABPC1-215ENST00000520804 KIF23Q02241 960 aaPredicted RBP24.93■■□□□ 1.58
PABPC1-215ENST00000520804 EPHA10Q5JZY3 1008 aa24.93■■□□□ 1.58
PABPC1-215ENST00000520804 LMBR1LQ6UX01 489 aa24.93■■□□□ 1.58
PABPC1-215ENST00000520804 SCAF8Q9UPN6 1271 aaKnown RBP24.93■■□□□ 1.58
PABPC1-215ENST00000520804 PAPPA2Q9BXP8 1791 aa24.93■■□□□ 1.58
PABPC1-215ENST00000520804 IRS2Q9Y4H2 1338 aa24.92■■□□□ 1.58
PABPC1-215ENST00000520804 TAF5LO75529 589 aa24.92■■□□□ 1.58
PABPC1-215ENST00000520804 GTF2IP78347 998 aa24.92■■□□□ 1.58
PABPC1-215ENST00000520804 C15orf52Q6ZUT6 534 aaKnown RBP24.92■■□□□ 1.58
PABPC1-215ENST00000520804 CD209Q9NNX6 404 aa24.92■■□□□ 1.58
PABPC1-215ENST00000520804 SNAP23O00161 211 aa24.91■■□□□ 1.58
PABPC1-215ENST00000520804 ALDH1L1O75891 902 aa24.91■■□□□ 1.58
PABPC1-215ENST00000520804 HELBQ8NG08 1087 aaPredicted RBP24.91■■□□□ 1.58
PABPC1-215ENST00000520804 C9orf78Q9NZ63 289 aaPredicted RBP24.91■■□□□ 1.58
PABPC1-215ENST00000520804 CCDC57Q2TAC2 916 aa24.9■■□□□ 1.58
PABPC1-215ENST00000520804 SLC4A10Q6U841 1118 aa24.9■■□□□ 1.58
PABPC1-215ENST00000520804 KIAA0825Q8IV33 1275 aa24.9■■□□□ 1.58
PABPC1-215ENST00000520804 HDAC9Q9UKV0 1011 aa24.9■■□□□ 1.58
PABPC1-215ENST00000520804 SASH1O94885 1247 aa24.89■■□□□ 1.58
PABPC1-215ENST00000520804 SRCIN1Q9C0H9 1055 aa24.89■■□□□ 1.58
PABPC1-215ENST00000520804 SAGE1Q9NXZ1 904 aa24.89■■□□□ 1.58
PABPC1-215ENST00000520804 CASP8AP2Q9UKL3 1982 aa24.88■■□□□ 1.57
PABPC1-215ENST00000520804 TAF7LQ5H9L4 462 aa24.88■■□□□ 1.57
PABPC1-215ENST00000520804 PRAMEF18Q5VWM3 479 aa24.88■■□□□ 1.57
PABPC1-215ENST00000520804 RASAL3Q86YV0 1011 aa24.88■■□□□ 1.57
PABPC1-215ENST00000520804 ZNF594Q96JF6 807 aaPredicted RBP24.88■■□□□ 1.57
PABPC1-215ENST00000520804 LDHAL6AQ6ZMR3 332 aa24.87■■□□□ 1.57
PABPC1-215ENST00000520804 MOB2Q70IA6 237 aa24.87■■□□□ 1.57
PABPC1-215ENST00000520804 CSRNP1Q96S65 589 aa24.87■■□□□ 1.57
PABPC1-215ENST00000520804 IL1R1P14778 569 aa24.86■■□□□ 1.57
PABPC1-215ENST00000520804 ZBED3Q96IU2 234 aaPredicted RBP24.86■■□□□ 1.57
PABPC1-215ENST00000520804 ZNF804AQ7Z570 1209 aa24.85■■□□□ 1.57
PABPC1-215ENST00000520804 APOBEC3FQ8IUX4 373 aaKnown RBP24.85■■□□□ 1.57
PABPC1-215ENST00000520804 REM2Q8IYK8 340 aaPredicted RBP24.85■■□□□ 1.57
PABPC1-215ENST00000520804 CERS5Q8N5B7 392 aa24.85■■□□□ 1.57
PABPC1-215ENST00000520804 CNNM1Q9NRU3 951 aa24.85■■□□□ 1.57
PABPC1-215ENST00000520804 RNF186Q9NXI6 227 aa24.85■■□□□ 1.57
PABPC1-215ENST00000520804 UBE2Q2LH0YL09 131 aa24.84■■□□□ 1.57
PABPC1-215ENST00000520804 KAZALD1Q96I82 304 aa24.84■■□□□ 1.57
PABPC1-215ENST00000520804 SUCLG2Q96I99 432 aa24.84■■□□□ 1.57
PABPC1-215ENST00000520804 MCOLN1Q9GZU1 580 aa24.84■■□□□ 1.57
PABPC1-215ENST00000520804 AKAP11Q9UKA4 1901 aa24.84■■□□□ 1.57
PABPC1-215ENST00000520804 PLIN1O60240 522 aa24.83■■□□□ 1.57
PABPC1-215ENST00000520804 TRPA1O75762 1119 aa24.83■■□□□ 1.57
PABPC1-215ENST00000520804 NF2P35240 595 aa24.83■■□□□ 1.57
PABPC1-215ENST00000520804 MRPL50Q8N5N7 158 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms