RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 BLOC1S2Q6QNY1 142 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 ZNF34Q8IZ26 560 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 DSCC1Q9BVC3 393 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 CCDC87Q9NVE4 849 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 ZDHHC9Q9Y397 364 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 DDX49Q9Y6V7 483 aaKnown RBP11.88□□□□□ -0.51
SPARC-202ENST00000520687 ANKRD36CQ5JPF3 1778 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 A0A1B0GUL7 405 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 IFIT1P09914 478 aaKnown RBP11.87□□□□□ -0.51
SPARC-202ENST00000520687 PDCP20941 246 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 CTSWP56202 376 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 CSPP1Q1MSJ5 1256 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 MCTP1Q6DN14 999 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
SPARC-202ENST00000520687 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 TTLL11Q8NHH1 800 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 SLC4A9Q96Q91 983 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 DNAJC2Q99543 621 aaKnown RBP11.87□□□□□ -0.51
SPARC-202ENST00000520687 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
SPARC-202ENST00000520687 LMBRD1Q9NUN5 540 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
SPARC-202ENST00000520687 IRS4O14654 1257 aaPredicted RBP11.86□□□□□ -0.51
SPARC-202ENST00000520687 RNF113AO15541 343 aaKnown RBP11.86□□□□□ -0.51
SPARC-202ENST00000520687 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
SPARC-202ENST00000520687 ZMYM1Q5SVZ6 1142 aa11.86□□□□□ -0.51
SPARC-202ENST00000520687 ZSCAN25Q6NSZ9 544 aa11.86□□□□□ -0.51
SPARC-202ENST00000520687 SYTL4Q96C24 671 aaPredicted RBP11.86□□□□□ -0.51
SPARC-202ENST00000520687 FAM89AQ96GI7 184 aa11.86□□□□□ -0.51
SPARC-202ENST00000520687 TRMT112Q9UI30 125 aaKnown RBP11.86□□□□□ -0.51
SPARC-202ENST00000520687 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
SPARC-202ENST00000520687 ZNF330Q9Y3S2 320 aaPredicted RBP11.86□□□□□ -0.51
SPARC-202ENST00000520687 NCLP19338 710 aaKnown RBP11.85□□□□□ -0.51
SPARC-202ENST00000520687 TIMM10P62072 90 aa11.85□□□□□ -0.51
SPARC-202ENST00000520687 LRRC24Q50LG9 513 aa11.85□□□□□ -0.51
SPARC-202ENST00000520687 SLC27A3Q5K4L6 730 aa11.85□□□□□ -0.51
SPARC-202ENST00000520687 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
SPARC-202ENST00000520687 NMRK2Q9NPI5 230 aa11.85□□□□□ -0.51
SPARC-202ENST00000520687 CTNNA3Q9UI47 895 aa11.85□□□□□ -0.51
SPARC-202ENST00000520687 RIPOR2Q9Y4F9 1068 aa11.85□□□□□ -0.51
SPARC-202ENST00000520687 RTL9Q8NET4 1388 aa11.85□□□□□ -0.51
SPARC-202ENST00000520687 TTF1Q15361 905 aaPredicted RBP11.84□□□□□ -0.51
SPARC-202ENST00000520687 HLFQ16534 295 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 LDHAL6AQ6ZMR3 332 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 SYAP1Q96A49 352 aaPredicted RBP11.84□□□□□ -0.51
SPARC-202ENST00000520687 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.51
SPARC-202ENST00000520687 PRDM10Q9NQV6 1147 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 PCNTO95613 3336 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 MROH5Q6ZUA9 1318 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 LOC102724428A0A0B4J2F2 783 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 GOLIM4O00461 696 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 UQCRFS1P1P0C7P4 283 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 ZSCAN22P10073 491 aaPredicted RBP11.84□□□□□ -0.51
SPARC-202ENST00000520687 ITGA6P23229 1130 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 SIK1P57059 783 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 ZNF445P59923 1031 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 ATP2B3Q16720 1220 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 ADCK5Q3MIX3 580 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
SPARC-202ENST00000520687 CLEC4GQ6UXB4 293 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 TMEM87AQ8NBN3 555 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 XAGE2Q96GT9 111 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 ZNF594Q96JF6 807 aaPredicted RBP11.84□□□□□ -0.51
SPARC-202ENST00000520687 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 UTP14AQ9BVJ6 771 aaKnown RBP11.84□□□□□ -0.51
SPARC-202ENST00000520687 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
SPARC-202ENST00000520687 LRRC4BQ9NT99 713 aa11.84□□□□□ -0.51
SPARC-202ENST00000520687 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
SPARC-202ENST00000520687 STX6O43752 255 aa11.83□□□□□ -0.52
SPARC-202ENST00000520687 ATP6V1AP38606 617 aa11.83□□□□□ -0.52
SPARC-202ENST00000520687 PKP1Q13835 747 aa11.83□□□□□ -0.52
SPARC-202ENST00000520687 DDX46Q7L014 1031 aaKnown RBP11.83□□□□□ -0.52
SPARC-202ENST00000520687 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
SPARC-202ENST00000520687 PUS3Q9BZE2 481 aaKnown RBP11.83□□□□□ -0.52
SPARC-202ENST00000520687 CNNM1Q9NRU3 951 aa11.83□□□□□ -0.52
SPARC-202ENST00000520687 PRPF40AO75400 957 aaKnown RBP11.82□□□□□ -0.52
SPARC-202ENST00000520687 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
SPARC-202ENST00000520687 NOL8Q76FK4 1167 aaKnown RBP11.82□□□□□ -0.52
SPARC-202ENST00000520687 FBXL16Q8N461 479 aa11.82□□□□□ -0.52
SPARC-202ENST00000520687 BTAF1O14981 1849 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 NUP98P52948 1817 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 C10orf71Q711Q0 1435 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 PHF14O94880 888 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 PDE8BO95263 885 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 SYT1P21579 422 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 GPTP24298 496 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 SMC1BQ8NDV3 1235 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 LPIN2Q92539 896 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
SPARC-202ENST00000520687 LLPHQ9BRT6 129 aaKnown RBP11.81□□□□□ -0.52
SPARC-202ENST00000520687 GRPEL1Q9HAV7 217 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 KIF3AQ9Y496 699 aa11.81□□□□□ -0.52
SPARC-202ENST00000520687 CAMTA2O94983 1202 aa11.8□□□□□ -0.52
SPARC-202ENST00000520687 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
SPARC-202ENST00000520687 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
SPARC-202ENST00000520687 DHX32Q7L7V1 743 aaKnown RBP11.8□□□□□ -0.52
SPARC-202ENST00000520687 APPBP2Q92624 585 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms