RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 UQCRFS1P1P0C7P4 283 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 HSPD1P10809 573 aaKnown RBP10.01□□□□□ -0.81
HMGB4-203ENST00000519684 XRCC6P12956 609 aaKnown RBP eCLIP10.01□□□□□ -0.81
HMGB4-203ENST00000519684 HCLS1P14317 486 aaPredicted RBP10.01□□□□□ -0.81
HMGB4-203ENST00000519684 PDCP20941 246 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 TOB2Q14106 344 aaPredicted RBP10.01□□□□□ -0.81
HMGB4-203ENST00000519684 PUM3Q15397 648 aaKnown RBP10.01□□□□□ -0.81
HMGB4-203ENST00000519684 CCDC152Q4G0S7 254 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 ZNF512BQ96KM6 892 aaPredicted RBP10.01□□□□□ -0.81
HMGB4-203ENST00000519684 TCEANC2Q96MN5 208 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 MPHOSPH8Q99549 860 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 CTNNA3Q9UI47 895 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 LAMA4Q16363 1823 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 MYH14Q7Z406 1995 aaKnown RBP10.01□□□□□ -0.81
HMGB4-203ENST00000519684 F13A1P00488 732 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 SLC5A1P13866 664 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 FOXD4L6Q3SYB3 417 aaPredicted RBP10.01□□□□□ -0.81
HMGB4-203ENST00000519684 SLFNL1Q499Z3 407 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 FOXD4L3Q6VB84 417 aaPredicted RBP10.01□□□□□ -0.81
HMGB4-203ENST00000519684 VGLL2Q8N8G2 317 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 LPIN2Q92539 896 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 APPBP2Q92624 585 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 BCL9LQ86UU0 1499 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 IGHMBP2P38935 993 aaKnown RBP10□□□□□ -0.81
HMGB4-203ENST00000519684 SCARF1Q14162 830 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 CSPP1Q1MSJ5 1256 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 Q6ZUG5 572 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 GPT2Q8TD30 523 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 SYAP1Q96A49 352 aaPredicted RBP10□□□□□ -0.81
HMGB4-203ENST00000519684 CHAMP1Q96JM3 812 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 VPS37CA5D8V6 355 aaPredicted RBP10□□□□□ -0.81
HMGB4-203ENST00000519684 MCAMP43121 646 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 ZNF445P59923 1031 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 ST3GAL1Q11201 340 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 ZSCAN23Q3MJ62 389 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 OSBP2Q969R2 916 aa10□□□□□ -0.81
HMGB4-203ENST00000519684 RTL9Q8NET4 1388 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 NTSR2O95665 410 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 STK3Q13188 491 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 LARP1BQ659C4 914 aaKnown RBP9.99□□□□□ -0.81
HMGB4-203ENST00000519684 CLEC4GQ6UXB4 293 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 DHX32Q7L7V1 743 aaKnown RBP9.99□□□□□ -0.81
HMGB4-203ENST00000519684 SPATA31A6Q5VVP1 1343 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 AKAP11Q9UKA4 1901 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 ARID4AP29374 1257 aaPredicted RBP9.99□□□□□ -0.81
HMGB4-203ENST00000519684 IMMTQ16891 758 aaKnown RBP9.99□□□□□ -0.81
HMGB4-203ENST00000519684 CCDC102BQ68D86 513 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 PI16Q6UXB8 463 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 LINC00116Q8NCU8 138 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 USP21Q9UK80 565 aa9.99□□□□□ -0.81
HMGB4-203ENST00000519684 SCN7AQ01118 1682 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 CNTNAP4Q9C0A0 1308 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 NHSQ6T4R5 1651 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 E7EWF7 191 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 COL9A3Q14050 684 aaPredicted RBP9.98□□□□□ -0.81
HMGB4-203ENST00000519684 STOX1Q6ZVD7 989 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 USP48Q86UV5 1035 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 GAS2L3Q86XJ1 694 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 FNBP4Q8N3X1 1017 aaPredicted RBP9.98□□□□□ -0.81
HMGB4-203ENST00000519684 TMEM87AQ8NBN3 555 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
HMGB4-203ENST00000519684 BRF1Q92994 677 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 GTF3C6Q969F1 213 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 RBM27Q9P2N5 1060 aaKnown RBP9.98□□□□□ -0.81
HMGB4-203ENST00000519684 MTMR6Q9Y217 621 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 BTAF1O14981 1849 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 THSD7AQ9UPZ6 1657 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 IDH1O75874 414 aaKnown RBP9.98□□□□□ -0.81
HMGB4-203ENST00000519684 ATRNO75882 1429 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 FGFR2P21802 821 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 ADD2P35612 726 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 PHKA1P46020 1223 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 ANP32BQ92688 251 aaKnown RBP9.98□□□□□ -0.81
HMGB4-203ENST00000519684 CHMP4CQ96CF2 233 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 CDC5LQ99459 802 aaKnown RBP9.98□□□□□ -0.81
HMGB4-203ENST00000519684 SEC31BQ9NQW1 1179 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 CNPY2Q9Y2B0 182 aa9.98□□□□□ -0.81
HMGB4-203ENST00000519684 GPAA1O43292 621 aa9.97□□□□□ -0.81
HMGB4-203ENST00000519684 PHF14O94880 888 aa9.97□□□□□ -0.81
HMGB4-203ENST00000519684 SLC9C2Q5TAH2 1124 aa9.97□□□□□ -0.81
HMGB4-203ENST00000519684 MEX3CQ5U5Q3 659 aaKnown RBP9.97□□□□□ -0.81
HMGB4-203ENST00000519684 PANK2Q9BZ23 570 aa9.97□□□□□ -0.81
HMGB4-203ENST00000519684 GDPD2Q9HCC8 539 aa9.97□□□□□ -0.81
HMGB4-203ENST00000519684 RGL2O15211 777 aa9.96□□□□□ -0.81
HMGB4-203ENST00000519684 UBE3CQ15386 1083 aa9.96□□□□□ -0.81
HMGB4-203ENST00000519684 LRRC2Q9BYS8 371 aa9.96□□□□□ -0.81
HMGB4-203ENST00000519684 PUS7LQ9H0K6 701 aaKnown RBP9.96□□□□□ -0.81
HMGB4-203ENST00000519684 PIH1D3Q9NQM4 214 aaKnown RBP9.96□□□□□ -0.81
HMGB4-203ENST00000519684 KIF3AQ9Y496 699 aa9.96□□□□□ -0.81
HMGB4-203ENST00000519684 FIBPO43427 364 aa9.96□□□□□ -0.82
HMGB4-203ENST00000519684 GTF2E1P29083 439 aaPredicted RBP9.96□□□□□ -0.82
HMGB4-203ENST00000519684 EXOSC10Q01780 885 aaKnown RBP9.96□□□□□ -0.82
HMGB4-203ENST00000519684 TTLL5Q6EMB2 1281 aa9.96□□□□□ -0.82
HMGB4-203ENST00000519684 FAM184AQ8NB25 1140 aa9.96□□□□□ -0.82
HMGB4-203ENST00000519684 SPATA5Q8NB90 893 aa9.96□□□□□ -0.82
HMGB4-203ENST00000519684 LLPHQ9BRT6 129 aaKnown RBP9.96□□□□□ -0.82
HMGB4-203ENST00000519684 TMEM63CQ9P1W3 806 aa9.96□□□□□ -0.82
HMGB4-203ENST00000519684 NAP1L2Q9ULW6 460 aaPredicted RBP9.96□□□□□ -0.82
HMGB4-203ENST00000519684 CASZ1Q86V15 1759 aa9.96□□□□□ -0.82
HMGB4-203ENST00000519684 TCHHQ07283 1943 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms