RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
SCUBE2-205ENST00000519535 TMEM88BA6NKF7 163 aa17.12■□□□□ 0.33
SCUBE2-205ENST00000519535 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
SCUBE2-205ENST00000519535 LRRC24Q50LG9 513 aa17.12■□□□□ 0.33
SCUBE2-205ENST00000519535 SCAF8Q9UPN6 1271 aaKnown RBP17.12■□□□□ 0.33
SCUBE2-205ENST00000519535 RFX5P48382 616 aaPredicted RBP17.11■□□□□ 0.33
SCUBE2-205ENST00000519535 ANKRD2Q9GZV1 360 aa17.11■□□□□ 0.33
SCUBE2-205ENST00000519535 RIPOR2Q9Y4F9 1068 aa17.11■□□□□ 0.33
SCUBE2-205ENST00000519535 ZNF646O15015 1829 aaPredicted RBP17.11■□□□□ 0.33
SCUBE2-205ENST00000519535 CNTNAP1P78357 1384 aa17.11■□□□□ 0.33
SCUBE2-205ENST00000519535 USP17L3A6NCW0 530 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 USP17L4A6NCW7 530 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 ADM5C9JUS6 153 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 H7C1D1 291 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 PLIN1O60240 522 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 CT47B1P0C2W7 299 aaPredicted RBP17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 RPS12P25398 132 aaKnown RBP17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 VEGFBP49765 207 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 CCDC57Q2TAC2 916 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 USP17L1Q7RTZ2 530 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 USP48Q86UV5 1035 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 CERS5Q8N5B7 392 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 JAG2Q9Y219 1238 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 ZNF609O15014 1411 aa17.1■□□□□ 0.33
SCUBE2-205ENST00000519535 LDHAL6AQ6ZMR3 332 aa17.09■□□□□ 0.33
SCUBE2-205ENST00000519535 MEIS3Q99687 375 aa17.09■□□□□ 0.33
SCUBE2-205ENST00000519535 COA1Q9GZY4 146 aa17.09■□□□□ 0.33
SCUBE2-205ENST00000519535 CD209Q9NNX6 404 aa17.09■□□□□ 0.33
SCUBE2-205ENST00000519535 PCDHAC2Q9Y5I4 1007 aa17.09■□□□□ 0.33
SCUBE2-205ENST00000519535 AOX1Q06278 1338 aa17.09■□□□□ 0.33
SCUBE2-205ENST00000519535 A0A1B0GUL6 1792 aa17.08■□□□□ 0.33
SCUBE2-205ENST00000519535 G3V3G9 751 aa17.08■□□□□ 0.32
SCUBE2-205ENST00000519535 KIF4BQ2VIQ3 1234 aa17.08■□□□□ 0.32
SCUBE2-205ENST00000519535 DCAF8Q5TAQ9 597 aa17.08■□□□□ 0.32
SCUBE2-205ENST00000519535 C15orf52Q6ZUT6 534 aaKnown RBP17.08■□□□□ 0.32
SCUBE2-205ENST00000519535 VGLL2Q8N8G2 317 aa17.08■□□□□ 0.32
SCUBE2-205ENST00000519535 CNNM1Q9NRU3 951 aa17.08■□□□□ 0.32
SCUBE2-205ENST00000519535 RASSF10A6NK89 507 aa17.07■□□□□ 0.32
SCUBE2-205ENST00000519535 GTF2IP78347 998 aa17.07■□□□□ 0.32
SCUBE2-205ENST00000519535 AGBL3Q8NEM8 1001 aa17.07■□□□□ 0.32
SCUBE2-205ENST00000519535 ZC3H15Q8WU90 426 aaKnown RBP17.07■□□□□ 0.32
SCUBE2-205ENST00000519535 FBXW7Q969H0 707 aa17.07■□□□□ 0.32
SCUBE2-205ENST00000519535 CELF2O95319 508 aaKnown RBP17.06■□□□□ 0.32
SCUBE2-205ENST00000519535 TRIM27P14373 513 aa17.06■□□□□ 0.32
SCUBE2-205ENST00000519535 GYG1P46976 350 aa17.06■□□□□ 0.32
SCUBE2-205ENST00000519535 KCNJ4P48050 445 aa17.06■□□□□ 0.32
SCUBE2-205ENST00000519535 SCARF1Q14162 830 aa17.06■□□□□ 0.32
SCUBE2-205ENST00000519535 NBPF9Q3BBW0 867 aa17.06■□□□□ 0.32
SCUBE2-205ENST00000519535 TAF7LQ5H9L4 462 aa17.06■□□□□ 0.32
SCUBE2-205ENST00000519535 STRIP1Q5VSL9 837 aa17.06■□□□□ 0.32
SCUBE2-205ENST00000519535 GGA3Q9NZ52 723 aa17.06■□□□□ 0.32
SCUBE2-205ENST00000519535 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
SCUBE2-205ENST00000519535 PTPN12Q05209 780 aaKnown RBP17.05■□□□□ 0.32
SCUBE2-205ENST00000519535 GRIK5Q16478 980 aa17.05■□□□□ 0.32
SCUBE2-205ENST00000519535 TTLL5Q6EMB2 1281 aa17.05■□□□□ 0.32
SCUBE2-205ENST00000519535 FAM84BQ96KN1 310 aaPredicted RBP17.05■□□□□ 0.32
SCUBE2-205ENST00000519535 API5Q9BZZ5 524 aaKnown RBP17.05■□□□□ 0.32
SCUBE2-205ENST00000519535 MYOZ2Q9NPC6 264 aa17.05■□□□□ 0.32
SCUBE2-205ENST00000519535 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
SCUBE2-205ENST00000519535 SASH1O94885 1247 aa17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 HSPA1AP0DMV8 641 aaKnown RBP17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 HSPA1BP0DMV9 641 aaKnown RBP17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 IL1R1P14778 569 aa17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 INTS3Q68E01 1043 aaKnown RBP17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 ATG9AQ7Z3C6 839 aa17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 KRT26Q7Z3Y9 468 aa17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 KIAA0825Q8IV33 1275 aa17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 ZBED3Q96IU2 234 aaPredicted RBP17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 ZNF408Q9H9D4 720 aa17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
SCUBE2-205ENST00000519535 PSME4Q14997 1843 aa17.03■□□□□ 0.32
SCUBE2-205ENST00000519535 PRAMEF18Q5VWM3 479 aa17.03■□□□□ 0.32
SCUBE2-205ENST00000519535 CYP4F22Q6NT55 531 aa17.03■□□□□ 0.32
SCUBE2-205ENST00000519535 CDC37L1Q7L3B6 337 aa17.03■□□□□ 0.32
SCUBE2-205ENST00000519535 ZIC5Q96T25 663 aa17.03■□□□□ 0.32
SCUBE2-205ENST00000519535 PA2G4Q9UQ80 394 aaKnown RBP17.03■□□□□ 0.32
SCUBE2-205ENST00000519535 TLL2Q9Y6L7 1015 aa17.03■□□□□ 0.32
SCUBE2-205ENST00000519535 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
SCUBE2-205ENST00000519535 DEFB115Q30KQ5 88 aa17.02■□□□□ 0.32
SCUBE2-205ENST00000519535 SAPCD2Q86UD0 394 aa17.02■□□□□ 0.32
SCUBE2-205ENST00000519535 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
SCUBE2-205ENST00000519535 CLUAP1Q96AJ1 413 aa17.02■□□□□ 0.32
SCUBE2-205ENST00000519535 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 WNT10BO00744 389 aa17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 AOC2O75106 756 aa17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 UBTFL1P0CB47 393 aaPredicted RBP17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 RLBP1P12271 317 aa17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 FGFR2P21802 821 aa17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 UBE4AQ14139 1066 aa17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 FBXO33Q7Z6M2 555 aa17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 IQSEC3Q9UPP2 1182 aaPredicted RBP17.01■□□□□ 0.31
SCUBE2-205ENST00000519535 F8W031 263 aaPredicted RBP17■□□□□ 0.31
SCUBE2-205ENST00000519535 EYA2O00167 538 aa17■□□□□ 0.31
SCUBE2-205ENST00000519535 METTL24Q5JXM2 366 aa17■□□□□ 0.31
SCUBE2-205ENST00000519535 COL13A1Q5TAT6 717 aaPredicted RBP17■□□□□ 0.31
SCUBE2-205ENST00000519535 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms