RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SNAP23O00161 211 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 ECE2O60344 883 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 TAF5LO75529 589 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 RAD17O75943 681 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 GNAI3P08754 354 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 ATP2B4P23634 1241 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 KLRK1P26718 216 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 CXCL9Q07325 125 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 ITPRIPQ8IWB1 547 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 KLHDC4Q8TBB5 520 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 PUS3Q9BZE2 481 aaKnown RBP9.44□□□□□ -0.9
SDCBP-206ENST00000519115 VPS33BQ9H267 617 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 ZNRF3Q9ULT6 936 aa9.44□□□□□ -0.9
SDCBP-206ENST00000519115 MED23Q9ULK4 1368 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 POTECB2RU33 542 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 G3V3G9 751 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 VEGFAP15692 232 aaPredicted RBP9.43□□□□□ -0.9
SDCBP-206ENST00000519115 KCNJ4P48050 445 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 IRX6P78412 446 aaPredicted RBP9.43□□□□□ -0.9
SDCBP-206ENST00000519115 LRRC24Q50LG9 513 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 TXNRD3Q86VQ6 643 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 C16orf71Q8IYS4 520 aaPredicted RBP9.43□□□□□ -0.9
SDCBP-206ENST00000519115 GPC2Q8N158 579 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 L3MBTL3Q96JM7 780 aaPredicted RBP9.43□□□□□ -0.9
SDCBP-206ENST00000519115 ZC3H12CQ9C0D7 883 aaKnown RBP9.43□□□□□ -0.9
SDCBP-206ENST00000519115 ANKRD2Q9GZV1 360 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 KCNQ5Q9NR82 932 aa9.43□□□□□ -0.9
SDCBP-206ENST00000519115 ZNF804BA4D1E1 1349 aa9.42□□□□□ -0.9
SDCBP-206ENST00000519115 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
SDCBP-206ENST00000519115 C1QTNF8P60827 252 aa9.42□□□□□ -0.9
SDCBP-206ENST00000519115 CIAPIN1Q6FI81 312 aa9.42□□□□□ -0.9
SDCBP-206ENST00000519115 SIL1Q9H173 461 aa9.42□□□□□ -0.9
SDCBP-206ENST00000519115 C1orf115Q9H7X2 142 aa9.42□□□□□ -0.9
SDCBP-206ENST00000519115 LEMD3Q9Y2U8 911 aa9.42□□□□□ -0.9
SDCBP-206ENST00000519115 ADAMTSL1Q8N6G6 1762 aa9.42□□□□□ -0.9
SDCBP-206ENST00000519115 POLR2AP24928 1970 aaKnown RBP9.41□□□□□ -0.9
SDCBP-206ENST00000519115 PSMD14O00487 310 aa9.41□□□□□ -0.9
SDCBP-206ENST00000519115 TOMM70O94826 608 aa9.41□□□□□ -0.9
SDCBP-206ENST00000519115 POTEIP0CG38 1075 aa9.41□□□□□ -0.9
SDCBP-206ENST00000519115 POTEJP0CG39 1038 aa9.41□□□□□ -0.9
SDCBP-206ENST00000519115 GMPSP49915 693 aaPredicted RBP9.41□□□□□ -0.9
SDCBP-206ENST00000519115 SCNN1DP51172 638 aa9.41□□□□□ -0.9
SDCBP-206ENST00000519115 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
SDCBP-206ENST00000519115 HACL1Q9UJ83 578 aa9.41□□□□□ -0.9
SDCBP-206ENST00000519115 PA2G4Q9UQ80 394 aaKnown RBP9.41□□□□□ -0.9
SDCBP-206ENST00000519115 RIPOR2Q9Y4F9 1068 aa9.41□□□□□ -0.9
SDCBP-206ENST00000519115 ARAP2Q8WZ64 1704 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 SHTN1A0MZ66 631 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 IQCA1LA6NCM1 817 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 GNAI2P04899 355 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 LMOD1P29536 600 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-206ENST00000519115 EPHX2P34913 555 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 EPS15P42566 896 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 PTPN12Q05209 780 aaKnown RBP9.4□□□□□ -0.9
SDCBP-206ENST00000519115 TNIP1Q15025 636 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 EAPPQ56P03 285 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-206ENST00000519115 METTL24Q5JXM2 366 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 GCC1Q96CN9 775 aa9.4□□□□□ -0.9
SDCBP-206ENST00000519115 TAF1DQ9H5J8 278 aaPredicted RBP9.4□□□□□ -0.9
SDCBP-206ENST00000519115 MROH5Q6ZUA9 1318 aa9.39□□□□□ -0.91
SDCBP-206ENST00000519115 IRS2Q9Y4H2 1338 aa9.39□□□□□ -0.91
SDCBP-206ENST00000519115 EYA2O00167 538 aa9.39□□□□□ -0.91
SDCBP-206ENST00000519115 SRGAP3O43295 1099 aa9.39□□□□□ -0.91
SDCBP-206ENST00000519115 HMMRO75330 724 aa9.39□□□□□ -0.91
SDCBP-206ENST00000519115 B4GALNT3Q6L9W6 998 aa9.39□□□□□ -0.91
SDCBP-206ENST00000519115 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
SDCBP-206ENST00000519115 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
SDCBP-206ENST00000519115 GPRC5DQ9NZD1 345 aa9.39□□□□□ -0.91
SDCBP-206ENST00000519115 PCDHB15Q9Y5E8 787 aa9.39□□□□□ -0.91
SDCBP-206ENST00000519115 PNMA6EA0A0J9YXQ4 647 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 MTX1Q13505 466 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 ATG9AQ7Z3C6 839 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 ZNF804AQ7Z570 1209 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 VGLL2Q8N8G2 317 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 MXD3Q9BW11 206 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 COA1Q9GZY4 146 aa9.38□□□□□ -0.91
SDCBP-206ENST00000519115 TRPM7Q96QT4 1865 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 PDE8BO95263 885 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 VIL1P09327 827 aaKnown RBP9.37□□□□□ -0.91
SDCBP-206ENST00000519115 GYG1P46976 350 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 C15orf52Q6ZUT6 534 aaKnown RBP9.37□□□□□ -0.91
SDCBP-206ENST00000519115 PODNQ7Z5L7 613 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 LDHDQ86WU2 507 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 SMC1BQ8NDV3 1235 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 TRPM4Q8TD43 1214 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 CD209Q9NNX6 404 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 COPRSQ9NQ92 184 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 CNOT7Q9UIV1 285 aaKnown RBP9.37□□□□□ -0.91
SDCBP-206ENST00000519115 JAG2Q9Y219 1238 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 CLEC11AQ9Y240 323 aa9.37□□□□□ -0.91
SDCBP-206ENST00000519115 ECM29Q5VYK3 1845 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 CIAO1O76071 339 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 EGFRP00533 1210 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms