RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 ITGB5P18084 799 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 PTPRAP18433 802 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 EPHA1P21709 976 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 PTK7Q13308 1070 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 MSMPQ1L6U9 139 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 COL13A1Q5TAT6 717 aaPredicted RBP6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 ANKMY2Q8IV38 441 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 OR13H1Q8NG92 308 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 RUSC1Q9BVN2 902 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 RASSF4Q9H2L5 321 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 NISCHQ9Y2I1 1504 aa6.64□□□□□ -1.35
ATP6V1C1-204ENST00000518959 F13BP05160 661 aa6.63□□□□□ -1.35
ATP6V1C1-204ENST00000518959 CABP4P57796 275 aa6.63□□□□□ -1.35
ATP6V1C1-204ENST00000518959 NLRP12P59046 1061 aa6.63□□□□□ -1.35
ATP6V1C1-204ENST00000518959 ZNF648Q5T619 568 aaPredicted RBP6.63□□□□□ -1.35
ATP6V1C1-204ENST00000518959 TTC39BQ5VTQ0 682 aaPredicted RBP6.63□□□□□ -1.35
ATP6V1C1-204ENST00000518959 COL26A1Q96A83 441 aa6.63□□□□□ -1.35
ATP6V1C1-204ENST00000518959 MAFBQ9Y5Q3 323 aaPredicted RBP6.63□□□□□ -1.35
ATP6V1C1-204ENST00000518959 TM4SF5O14894 197 aa6.62□□□□□ -1.35
ATP6V1C1-204ENST00000518959 PRNPP04156 253 aa6.62□□□□□ -1.35
ATP6V1C1-204ENST00000518959 WEE1P30291 646 aa6.62□□□□□ -1.35
ATP6V1C1-204ENST00000518959 TRIP4Q15650 581 aaPredicted RBP6.62□□□□□ -1.35
ATP6V1C1-204ENST00000518959 CPSF6Q16630 551 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATP6V1C1-204ENST00000518959 SGO2Q562F6 1265 aa6.62□□□□□ -1.35
ATP6V1C1-204ENST00000518959 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
ATP6V1C1-204ENST00000518959 AGBL5Q8NDL9 886 aa6.62□□□□□ -1.35
ATP6V1C1-204ENST00000518959 FLCNQ8NFG4 579 aa6.62□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L15C9J2P7 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L10C9JJH3 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L13C9JLJ4 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L12C9JPN9 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L11C9JVI0 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L21D6R901 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L18D6R9N7 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L22D6RA61 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L17D6RBQ6 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L19D6RCP7 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L20D6RJB6 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 CYP26A1O43174 497 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 UBTFP17480 764 aaKnown RBP6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 PIP4K2BP78356 416 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 USP17L24Q0WX57 530 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 NCAPG2Q86XI2 1143 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 PIK3R5Q8WYR1 880 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 METTL22Q9BUU2 404 aaPredicted RBP6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 PBX4Q9BYU1 374 aa6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 BSDC1Q9NW68 430 aaPredicted RBP6.61□□□□□ -1.35
ATP6V1C1-204ENST00000518959 H3BRJ5 948 aa6.6□□□□□ -1.35
ATP6V1C1-204ENST00000518959 NFKBIBQ15653 356 aa6.6□□□□□ -1.35
ATP6V1C1-204ENST00000518959 ZNF124Q15973 351 aa6.6□□□□□ -1.35
ATP6V1C1-204ENST00000518959 FBLN7Q53RD9 439 aa6.6□□□□□ -1.35
ATP6V1C1-204ENST00000518959 COX20Q5RI15 118 aa6.6□□□□□ -1.35
ATP6V1C1-204ENST00000518959 PAOXQ6QHF9 649 aa6.6□□□□□ -1.35
ATP6V1C1-204ENST00000518959 ADAMTSL4Q6UY14 1074 aa6.6□□□□□ -1.35
ATP6V1C1-204ENST00000518959 C12orf50Q8NA57 414 aaPredicted RBP6.6□□□□□ -1.35
ATP6V1C1-204ENST00000518959 SLC7A3Q8WY07 619 aa6.6□□□□□ -1.35
ATP6V1C1-204ENST00000518959 FAM95CA0A1B0GW59 222 aa6.59□□□□□ -1.35
ATP6V1C1-204ENST00000518959 A6NJR5 290 aa6.59□□□□□ -1.35
ATP6V1C1-204ENST00000518959 DBX1A6NMT0 343 aa6.59□□□□□ -1.35
ATP6V1C1-204ENST00000518959 PKN1Q16512 942 aa6.59□□□□□ -1.35
ATP6V1C1-204ENST00000518959 NUTM2GQ5VZR2 741 aa6.59□□□□□ -1.35
ATP6V1C1-204ENST00000518959 WNT8BQ93098 351 aa6.59□□□□□ -1.35
ATP6V1C1-204ENST00000518959 OSGEPQ9NPF4 335 aa6.59□□□□□ -1.35
ATP6V1C1-204ENST00000518959 FAM13BQ9NYF5 915 aa6.59□□□□□ -1.35
ATP6V1C1-204ENST00000518959 FNDC3AQ9Y2H6 1198 aaKnown RBP6.59□□□□□ -1.35
ATP6V1C1-204ENST00000518959 FAM196BA6NMK8 535 aa6.58□□□□□ -1.36
ATP6V1C1-204ENST00000518959 BRD2P25440 801 aaKnown RBP6.58□□□□□ -1.36
ATP6V1C1-204ENST00000518959 ARL4DP49703 201 aa6.58□□□□□ -1.36
ATP6V1C1-204ENST00000518959 USP11P51784 963 aa6.58□□□□□ -1.36
ATP6V1C1-204ENST00000518959 NFXL1Q6ZNB6 911 aa6.58□□□□□ -1.36
ATP6V1C1-204ENST00000518959 ETFBKMTQ8IXQ9 262 aa6.58□□□□□ -1.36
ATP6V1C1-204ENST00000518959 POP1Q99575 1024 aaKnown RBP6.58□□□□□ -1.36
ATP6V1C1-204ENST00000518959 ZMYND15Q9H091 742 aa6.58□□□□□ -1.36
ATP6V1C1-204ENST00000518959 COL19A1Q14993 1142 aa6.57□□□□□ -1.36
ATP6V1C1-204ENST00000518959 KRTAP4-11Q9BYQ6 195 aa6.57□□□□□ -1.36
ATP6V1C1-204ENST00000518959 ADAM19Q9H013 955 aa6.57□□□□□ -1.36
ATP6V1C1-204ENST00000518959 VRTNQ9H8Y1 702 aa6.57□□□□□ -1.36
ATP6V1C1-204ENST00000518959 MEGF11A6BM72 1044 aa6.56□□□□□ -1.36
ATP6V1C1-204ENST00000518959 BIN1O00499 593 aa6.56□□□□□ -1.36
ATP6V1C1-204ENST00000518959 KANK4Q5T7N3 995 aaPredicted RBP6.56□□□□□ -1.36
ATP6V1C1-204ENST00000518959 GLMNQ92990 594 aa6.56□□□□□ -1.36
ATP6V1C1-204ENST00000518959 TBC1D32Q96NH3 1257 aa6.56□□□□□ -1.36
ATP6V1C1-204ENST00000518959 PAK6Q9NQU5 681 aaPredicted RBP6.56□□□□□ -1.36
ATP6V1C1-204ENST00000518959 ABI2Q9NYB9 513 aaPredicted RBP6.56□□□□□ -1.36
ATP6V1C1-204ENST00000518959 KIF4AO95239 1232 aa6.55□□□□□ -1.36
ATP6V1C1-204ENST00000518959 CYP2E1P05181 493 aaPredicted RBP6.55□□□□□ -1.36
ATP6V1C1-204ENST00000518959 SHISA5Q8N114 240 aa6.55□□□□□ -1.36
ATP6V1C1-204ENST00000518959 CEP120Q8N960 986 aa6.55□□□□□ -1.36
ATP6V1C1-204ENST00000518959 LRRC4CQ9HCJ2 640 aa6.55□□□□□ -1.36
ATP6V1C1-204ENST00000518959 CYP4F12Q9HCS2 524 aa6.55□□□□□ -1.36
ATP6V1C1-204ENST00000518959 FARP2O94887 1054 aaPredicted RBP6.54□□□□□ -1.36
ATP6V1C1-204ENST00000518959 PAPLNO95428 1278 aa6.54□□□□□ -1.36
ATP6V1C1-204ENST00000518959 C19orf57Q0VDD7 668 aa6.54□□□□□ -1.36
ATP6V1C1-204ENST00000518959 DUSP27Q5VZP5 1158 aa6.54□□□□□ -1.36
ATP6V1C1-204ENST00000518959 SPOCD1Q6ZMY3 1216 aa6.54□□□□□ -1.36
ATP6V1C1-204ENST00000518959 FAM200AQ8TCP9 573 aa6.54□□□□□ -1.36
ATP6V1C1-204ENST00000518959 FBLIM1Q8WUP2 373 aa6.54□□□□□ -1.36
ATP6V1C1-204ENST00000518959 USP26Q9BXU7 913 aa6.54□□□□□ -1.36
ATP6V1C1-204ENST00000518959 FKBP5Q13451 457 aaPredicted RBP6.53□□□□□ -1.36
ATP6V1C1-204ENST00000518959 PLCL1Q15111 1095 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms