RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 KLRK1P26718 216 aa28.26■■■□□ 2.12
NKX6-3-201ENST00000518699 LARGE2Q8N3Y3 721 aa28.26■■■□□ 2.12
NKX6-3-201ENST00000518699 LPIN2Q92539 896 aa28.26■■■□□ 2.12
NKX6-3-201ENST00000518699 KIF1BPQ96EK5 621 aa28.26■■■□□ 2.12
NKX6-3-201ENST00000518699 ZC3H12CQ9C0D7 883 aaKnown RBP28.26■■■□□ 2.12
NKX6-3-201ENST00000518699 SLC5A1P13866 664 aa28.25■■■□□ 2.11
NKX6-3-201ENST00000518699 C9orf131Q5VYM1 1079 aa28.25■■■□□ 2.11
NKX6-3-201ENST00000518699 RHPN1Q8TCX5 695 aa28.25■■■□□ 2.11
NKX6-3-201ENST00000518699 RWDD1Q9H446 243 aaPredicted RBP28.25■■■□□ 2.11
NKX6-3-201ENST00000518699 RNF181Q9P0P0 153 aa28.25■■■□□ 2.11
NKX6-3-201ENST00000518699 ZC3H4Q9UPT8 1303 aaKnown RBP28.25■■■□□ 2.11
NKX6-3-201ENST00000518699 ZNF646O15015 1829 aaPredicted RBP28.25■■■□□ 2.11
NKX6-3-201ENST00000518699 IFIT1P09914 478 aaKnown RBP28.24■■■□□ 2.11
NKX6-3-201ENST00000518699 TXNRD3Q86VQ6 643 aa28.24■■■□□ 2.11
NKX6-3-201ENST00000518699 RIMBP2O15034 1052 aa28.24■■■□□ 2.11
NKX6-3-201ENST00000518699 GCC1Q96CN9 775 aa28.24■■■□□ 2.11
NKX6-3-201ENST00000518699 MYH13Q9UKX3 1938 aa28.23■■■□□ 2.11
NKX6-3-201ENST00000518699 SCN9AQ15858 1988 aa28.23■■■□□ 2.11
NKX6-3-201ENST00000518699 A0A1B0GUL7 405 aa28.23■■■□□ 2.11
NKX6-3-201ENST00000518699 TNNI3KQ59H18 835 aa28.23■■■□□ 2.11
NKX6-3-201ENST00000518699 NIM1KQ8IY84 436 aa28.23■■■□□ 2.11
NKX6-3-201ENST00000518699 FPGT-TNNI3KV9GXZ4 949 aa28.23■■■□□ 2.11
NKX6-3-201ENST00000518699 ERICH6BQ5W0A0 696 aa28.22■■■□□ 2.11
NKX6-3-201ENST00000518699 JDP2Q8WYK2 163 aa28.22■■■□□ 2.11
NKX6-3-201ENST00000518699 IGHDP01880 384 aa28.21■■■□□ 2.11
NKX6-3-201ENST00000518699 SMC5Q8IY18 1101 aa28.21■■■□□ 2.11
NKX6-3-201ENST00000518699 LRRCC1Q9C099 1032 aa28.21■■■□□ 2.11
NKX6-3-201ENST00000518699 COA1Q9GZY4 146 aa28.21■■■□□ 2.11
NKX6-3-201ENST00000518699 APBB1O00213 710 aa28.2■■■□□ 2.1
NKX6-3-201ENST00000518699 ZNF804AQ7Z570 1209 aa28.2■■■□□ 2.1
NKX6-3-201ENST00000518699 ECE2O60344 883 aa28.19■■■□□ 2.1
NKX6-3-201ENST00000518699 FAM84BQ96KN1 310 aaPredicted RBP28.19■■■□□ 2.1
NKX6-3-201ENST00000518699 DBNDD1Q9H9R9 158 aa28.19■■■□□ 2.1
NKX6-3-201ENST00000518699 ZNRF3Q9ULT6 936 aa28.19■■■□□ 2.1
NKX6-3-201ENST00000518699 FZD9O00144 591 aa28.18■■■□□ 2.1
NKX6-3-201ENST00000518699 TIMM10P62072 90 aa28.18■■■□□ 2.1
NKX6-3-201ENST00000518699 CLASRPQ8N2M8 674 aaKnown RBP28.18■■■□□ 2.1
NKX6-3-201ENST00000518699 IL1RAPL2Q9NP60 686 aa28.18■■■□□ 2.1
NKX6-3-201ENST00000518699 ADORA1P30542 326 aa28.17■■■□□ 2.1
NKX6-3-201ENST00000518699 GYG1P46976 350 aa28.17■■■□□ 2.1
NKX6-3-201ENST00000518699 DOK7Q18PE1 504 aa28.17■■■□□ 2.1
NKX6-3-201ENST00000518699 CAVIN4Q5BKX8 364 aa28.17■■■□□ 2.1
NKX6-3-201ENST00000518699 PODNQ7Z5L7 613 aa28.17■■■□□ 2.1
NKX6-3-201ENST00000518699 FBXO33Q7Z6M2 555 aa28.17■■■□□ 2.1
NKX6-3-201ENST00000518699 EAF2Q96CJ1 260 aaPredicted RBP28.17■■■□□ 2.1
NKX6-3-201ENST00000518699 XAGE2Q96GT9 111 aa28.17■■■□□ 2.1
NKX6-3-201ENST00000518699 YDJCA8MPS7 323 aa28.16■■■□□ 2.1
NKX6-3-201ENST00000518699 HIBADHP31937 336 aaKnown RBP28.16■■■□□ 2.1
NKX6-3-201ENST00000518699 CD209Q9NNX6 404 aa28.16■■■□□ 2.1
NKX6-3-201ENST00000518699 G3V3G9 751 aa28.15■■■□□ 2.1
NKX6-3-201ENST00000518699 ZBTB22O15209 634 aa28.15■■■□□ 2.1
NKX6-3-201ENST00000518699 IL1R1P14778 569 aa28.15■■■□□ 2.1
NKX6-3-201ENST00000518699 DCAF8Q5TAQ9 597 aa28.15■■■□□ 2.1
NKX6-3-201ENST00000518699 AACSQ86V21 672 aa28.14■■■□□ 2.1
NKX6-3-201ENST00000518699 NEUROD6Q96NK8 337 aa28.14■■■□□ 2.1
NKX6-3-201ENST00000518699 DBNLQ9UJU6 430 aaKnown RBP28.14■■■□□ 2.1
NKX6-3-201ENST00000518699 ZNF541Q9H0D2 1346 aa28.13■■■□□ 2.09
NKX6-3-201ENST00000518699 VPS37DQ86XT2 251 aa28.13■■■□□ 2.09
NKX6-3-201ENST00000518699 DBNDD2Q9BQY9 259 aa28.13■■■□□ 2.09
NKX6-3-201ENST00000518699 BCAMP50895 628 aa28.12■■■□□ 2.09
NKX6-3-201ENST00000518699 CCDC102BQ68D86 513 aa28.12■■■□□ 2.09
NKX6-3-201ENST00000518699 TDRD7Q8NHU6 1098 aaKnown RBP28.12■■■□□ 2.09
NKX6-3-201ENST00000518699 SMARCA5O60264 1052 aaPredicted RBP28.11■■■□□ 2.09
NKX6-3-201ENST00000518699 PHKA1P46020 1223 aa28.11■■■□□ 2.09
NKX6-3-201ENST00000518699 EIF6P56537 245 aaKnown RBP28.11■■■□□ 2.09
NKX6-3-201ENST00000518699 TLR7Q9NYK1 1049 aaKnown RBP28.11■■■□□ 2.09
NKX6-3-201ENST00000518699 COL1A1P02452 1464 aaPredicted RBP28.11■■■□□ 2.09
NKX6-3-201ENST00000518699 KDM2BQ8NHM5 1336 aa28.11■■■□□ 2.09
NKX6-3-201ENST00000518699 CCDC8Q9H0W5 538 aaPredicted RBP28.11■■■□□ 2.09
NKX6-3-201ENST00000518699 AKAP11Q9UKA4 1901 aa28.1■■■□□ 2.09
NKX6-3-201ENST00000518699 IFIT2P09913 472 aaKnown RBP28.1■■■□□ 2.09
NKX6-3-201ENST00000518699 CXCL9Q07325 125 aa28.1■■■□□ 2.09
NKX6-3-201ENST00000518699 SEMA3EO15041 775 aa28.09■■■□□ 2.09
NKX6-3-201ENST00000518699 GORABQ5T7V8 394 aa28.09■■■□□ 2.09
NKX6-3-201ENST00000518699 GNL3LQ9NVN8 582 aaKnown RBP28.09■■■□□ 2.09
NKX6-3-201ENST00000518699 WDR90Q96KV7 1748 aa28.08■■■□□ 2.09
NKX6-3-201ENST00000518699 ARID4AP29374 1257 aaPredicted RBP28.08■■■□□ 2.09
NKX6-3-201ENST00000518699 ANKRD45Q5TZF3 282 aa28.08■■■□□ 2.09
NKX6-3-201ENST00000518699 CIAPIN1Q6FI81 312 aa28.08■■■□□ 2.09
NKX6-3-201ENST00000518699 PDS5AQ29RF7 1337 aaKnown RBP28.07■■■□□ 2.08
NKX6-3-201ENST00000518699 FAM205AQ6ZU69 1335 aa28.07■■■□□ 2.08
NKX6-3-201ENST00000518699 NUCB1Q02818 461 aa28.07■■■□□ 2.08
NKX6-3-201ENST00000518699 STRIP1Q5VSL9 837 aa28.07■■■□□ 2.08
NKX6-3-201ENST00000518699 ZNF512BQ96KM6 892 aaPredicted RBP28.07■■■□□ 2.08
NKX6-3-201ENST00000518699 KCNQ5Q9NR82 932 aa28.07■■■□□ 2.08
NKX6-3-201ENST00000518699 ZBTB47Q9UFB7 747 aaPredicted RBP28.07■■■□□ 2.08
NKX6-3-201ENST00000518699 USP17L3A6NCW0 530 aa28.06■■■□□ 2.08
NKX6-3-201ENST00000518699 USP17L4A6NCW7 530 aa28.06■■■□□ 2.08
NKX6-3-201ENST00000518699 RAD17O75943 681 aa28.06■■■□□ 2.08
NKX6-3-201ENST00000518699 TNIP1Q15025 636 aa28.06■■■□□ 2.08
NKX6-3-201ENST00000518699 CCDC158Q5M9N0 1113 aa28.06■■■□□ 2.08
NKX6-3-201ENST00000518699 USP17L1Q7RTZ2 530 aa28.06■■■□□ 2.08
NKX6-3-201ENST00000518699 GPC2Q8N158 579 aa28.06■■■□□ 2.08
NKX6-3-201ENST00000518699 CCDC136Q96JN2 1154 aa28.06■■■□□ 2.08
NKX6-3-201ENST00000518699 UQCRFS1P1P0C7P4 283 aa28.05■■■□□ 2.08
NKX6-3-201ENST00000518699 DACT2Q5SW24 774 aa28.05■■■□□ 2.08
NKX6-3-201ENST00000518699 CENPQQ7L2Z9 268 aaPredicted RBP28.05■■■□□ 2.08
NKX6-3-201ENST00000518699 PPP4R2Q9NY27 417 aa28.05■■■□□ 2.08
NKX6-3-201ENST00000518699 IQSEC3Q9UPP2 1182 aaPredicted RBP28.05■■■□□ 2.08
NKX6-3-201ENST00000518699 GLTPD2A6NH11 291 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms