RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 EPHA10Q5JZY3 1008 aa13.35□□□□□ -0.27
SPIDR-205ENST00000518060 CST9Q5W186 159 aa13.35□□□□□ -0.27
SPIDR-205ENST00000518060 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-205ENST00000518060 COA1Q9GZY4 146 aa13.35□□□□□ -0.27
SPIDR-205ENST00000518060 GGA3Q9NZ52 723 aa13.35□□□□□ -0.27
SPIDR-205ENST00000518060 PTPRCP08575 1304 aa13.35□□□□□ -0.27
SPIDR-205ENST00000518060 WDR33Q9C0J8 1336 aaKnown RBP13.35□□□□□ -0.27
SPIDR-205ENST00000518060 ADM5C9JUS6 153 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 ECE1P42892 770 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 DLK2Q6UY11 383 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 LDHAL6AQ6ZMR3 332 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 TXNRD3Q86VQ6 643 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 AGBL3Q8NEM8 1001 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 SUCLG2Q96I99 432 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 CAPNS2Q96L46 248 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 MXD3Q9BW11 206 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 PGAP2Q9UHJ9 254 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 TLL2Q9Y6L7 1015 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 CACNA1FO60840 1977 aa13.34□□□□□ -0.27
SPIDR-205ENST00000518060 SNAP23O00161 211 aa13.33□□□□□ -0.28
SPIDR-205ENST00000518060 COL13A1Q5TAT6 717 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-205ENST00000518060 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
SPIDR-205ENST00000518060 MYOZ2Q9NPC6 264 aa13.33□□□□□ -0.28
SPIDR-205ENST00000518060 ASTN2O75129 1339 aaPredicted RBP13.33□□□□□ -0.28
SPIDR-205ENST00000518060 NBPF7P0C2Y1 421 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-205ENST00000518060 ZNF280AP59817 542 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-205ENST00000518060 SCARF1Q14162 830 aa13.32□□□□□ -0.28
SPIDR-205ENST00000518060 ANGEL2Q5VTE6 544 aaKnown RBP13.32□□□□□ -0.28
SPIDR-205ENST00000518060 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
SPIDR-205ENST00000518060 SCN9AQ15858 1988 aa13.32□□□□□ -0.28
SPIDR-205ENST00000518060 FOXN1O15353 648 aa13.31□□□□□ -0.28
SPIDR-205ENST00000518060 GTF2IP78347 998 aa13.31□□□□□ -0.28
SPIDR-205ENST00000518060 DACT2Q5SW24 774 aa13.31□□□□□ -0.28
SPIDR-205ENST00000518060 STRIP1Q5VSL9 837 aa13.31□□□□□ -0.28
SPIDR-205ENST00000518060 TTLL5Q6EMB2 1281 aa13.31□□□□□ -0.28
SPIDR-205ENST00000518060 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
SPIDR-205ENST00000518060 TNS4Q8IZW8 715 aa13.31□□□□□ -0.28
SPIDR-205ENST00000518060 BEGAINQ9BUH8 593 aa13.31□□□□□ -0.28
SPIDR-205ENST00000518060 BICC1Q9H694 974 aaKnown RBP13.31□□□□□ -0.28
SPIDR-205ENST00000518060 MYO3BQ8WXR4 1341 aa13.31□□□□□ -0.28
SPIDR-205ENST00000518060 AOC2O75106 756 aa13.3□□□□□ -0.28
SPIDR-205ENST00000518060 HUNKP57058 714 aa13.3□□□□□ -0.28
SPIDR-205ENST00000518060 ALDH1L2Q3SY69 923 aa13.3□□□□□ -0.28
SPIDR-205ENST00000518060 SAPCD2Q86UD0 394 aa13.3□□□□□ -0.28
SPIDR-205ENST00000518060 KIAA0825Q8IV33 1275 aa13.3□□□□□ -0.28
SPIDR-205ENST00000518060 CD209Q9NNX6 404 aa13.3□□□□□ -0.28
SPIDR-205ENST00000518060 JAG2Q9Y219 1238 aa13.3□□□□□ -0.28
SPIDR-205ENST00000518060 PCNTO95613 3336 aa13.3□□□□□ -0.28
SPIDR-205ENST00000518060 ZNF609O15014 1411 aa13.3□□□□□ -0.28
SPIDR-205ENST00000518060 CAPN15O75808 1086 aa13.29□□□□□ -0.28
SPIDR-205ENST00000518060 SASH1O94885 1247 aa13.29□□□□□ -0.28
SPIDR-205ENST00000518060 CTCFP49711 727 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-205ENST00000518060 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-205ENST00000518060 DIEXFQ68CQ4 756 aaKnown RBP13.29□□□□□ -0.28
SPIDR-205ENST00000518060 C2orf69Q8N8R5 385 aa13.29□□□□□ -0.28
SPIDR-205ENST00000518060 CDCA5Q96FF9 252 aa13.29□□□□□ -0.28
SPIDR-205ENST00000518060 GMLQ99445 158 aa13.29□□□□□ -0.28
SPIDR-205ENST00000518060 GBA2Q9HCG7 927 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-205ENST00000518060 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
SPIDR-205ENST00000518060 SCAF8Q9UPN6 1271 aaKnown RBP13.29□□□□□ -0.28
SPIDR-205ENST00000518060 F8W031 263 aaPredicted RBP13.28□□□□□ -0.28
SPIDR-205ENST00000518060 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
SPIDR-205ENST00000518060 PUS3Q9BZE2 481 aaKnown RBP13.28□□□□□ -0.28
SPIDR-205ENST00000518060 WBP1LQ9NX94 342 aa13.28□□□□□ -0.28
SPIDR-205ENST00000518060 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
SPIDR-205ENST00000518060 UTYO14607 1347 aa13.28□□□□□ -0.28
SPIDR-205ENST00000518060 TRPM7Q96QT4 1865 aa13.27□□□□□ -0.28
SPIDR-205ENST00000518060 CT47B1P0C2W7 299 aaPredicted RBP13.27□□□□□ -0.29
SPIDR-205ENST00000518060 NBPF9Q3BBW0 867 aa13.27□□□□□ -0.29
SPIDR-205ENST00000518060 METTL24Q5JXM2 366 aa13.27□□□□□ -0.29
SPIDR-205ENST00000518060 VPS37DQ86XT2 251 aa13.27□□□□□ -0.29
SPIDR-205ENST00000518060 TRMT2AQ8IZ69 625 aaKnown RBP13.27□□□□□ -0.29
SPIDR-205ENST00000518060 MIER1Q8N108 512 aa13.27□□□□□ -0.29
SPIDR-205ENST00000518060 ANKRD44Q8N8A2 993 aa13.27□□□□□ -0.29
SPIDR-205ENST00000518060 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.29
SPIDR-205ENST00000518060 MROH5Q6ZUA9 1318 aa13.27□□□□□ -0.29
SPIDR-205ENST00000518060 UBTFL1P0CB47 393 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-205ENST00000518060 GYG1P46976 350 aa13.26□□□□□ -0.29
SPIDR-205ENST00000518060 LBX1P52954 281 aa13.26□□□□□ -0.29
SPIDR-205ENST00000518060 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-205ENST00000518060 USP44Q9H0E7 712 aa13.26□□□□□ -0.29
SPIDR-205ENST00000518060 PITPNM2Q9BZ72 1349 aa13.25□□□□□ -0.29
SPIDR-205ENST00000518060 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
SPIDR-205ENST00000518060 RBM5P52756 815 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPIDR-205ENST00000518060 HNRNPUQ00839 825 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPIDR-205ENST00000518060 DLGAP5Q15398 846 aa13.25□□□□□ -0.29
SPIDR-205ENST00000518060 RABL6Q3YEC7 729 aaPredicted RBP13.25□□□□□ -0.29
SPIDR-205ENST00000518060 LRRC24Q50LG9 513 aa13.25□□□□□ -0.29
SPIDR-205ENST00000518060 PRAMEF18Q5VWM3 479 aa13.25□□□□□ -0.29
SPIDR-205ENST00000518060 RGMBQ6NW40 437 aa13.25□□□□□ -0.29
SPIDR-205ENST00000518060 C15orf52Q6ZUT6 534 aaKnown RBP13.25□□□□□ -0.29
SPIDR-205ENST00000518060 KLHDC4Q8TBB5 520 aa13.25□□□□□ -0.29
SPIDR-205ENST00000518060 HHIPL1Q96JK4 782 aa13.25□□□□□ -0.29
SPIDR-205ENST00000518060 TSKSQ9UJT2 592 aa13.25□□□□□ -0.29
SPIDR-205ENST00000518060 PSME4Q14997 1843 aa13.25□□□□□ -0.29
SPIDR-205ENST00000518060 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
SPIDR-205ENST00000518060 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
SPIDR-205ENST00000518060 WNT10BO00744 389 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms