RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
CPEB4-203ENST00000517880 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
CPEB4-203ENST00000517880 EDC3Q96F86 508 aaKnown RBP12.86□□□□□ -0.35
CPEB4-203ENST00000517880 JAKMIP1Q96N16 626 aaKnown RBP12.86□□□□□ -0.35
CPEB4-203ENST00000517880 CCDC85AQ96PX6 553 aaPredicted RBP12.86□□□□□ -0.35
CPEB4-203ENST00000517880 MPHOSPH8Q99549 860 aa12.86□□□□□ -0.35
CPEB4-203ENST00000517880 NYXQ9GZU5 481 aa12.86□□□□□ -0.35
CPEB4-203ENST00000517880 NARFQ9UHQ1 456 aa12.86□□□□□ -0.35
CPEB4-203ENST00000517880 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
CPEB4-203ENST00000517880 LAMB2P55268 1798 aa12.85□□□□□ -0.35
CPEB4-203ENST00000517880 BTAF1O14981 1849 aa12.85□□□□□ -0.35
CPEB4-203ENST00000517880 RIC1Q4ADV7 1423 aa12.85□□□□□ -0.35
CPEB4-203ENST00000517880 IGHMBP2P38935 993 aaKnown RBP12.85□□□□□ -0.35
CPEB4-203ENST00000517880 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
CPEB4-203ENST00000517880 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
CPEB4-203ENST00000517880 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.85□□□□□ -0.35
CPEB4-203ENST00000517880 LRP5O75197 1615 aa12.84□□□□□ -0.35
CPEB4-203ENST00000517880 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
CPEB4-203ENST00000517880 SLC5A1P13866 664 aa12.84□□□□□ -0.35
CPEB4-203ENST00000517880 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
CPEB4-203ENST00000517880 FGFR2P21802 821 aa12.84□□□□□ -0.35
CPEB4-203ENST00000517880 AK2P54819 239 aa12.84□□□□□ -0.35
CPEB4-203ENST00000517880 FKBP4Q02790 459 aaKnown RBP eCLIP12.84□□□□□ -0.35
CPEB4-203ENST00000517880 SF3B3Q15393 1217 aaKnown RBP12.84□□□□□ -0.35
CPEB4-203ENST00000517880 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
CPEB4-203ENST00000517880 ZNF589Q86UQ0 364 aaPredicted RBP12.84□□□□□ -0.35
CPEB4-203ENST00000517880 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
CPEB4-203ENST00000517880 CCNL1Q9UK58 526 aaPredicted RBP12.84□□□□□ -0.35
CPEB4-203ENST00000517880 RTCBQ9Y3I0 505 aaKnown RBP12.84□□□□□ -0.35
CPEB4-203ENST00000517880 RPAP1Q9BWH6 1393 aaPredicted RBP12.83□□□□□ -0.35
CPEB4-203ENST00000517880 ZPR1O75312 459 aa12.83□□□□□ -0.36
CPEB4-203ENST00000517880 ARID4AP29374 1257 aaPredicted RBP12.83□□□□□ -0.36
CPEB4-203ENST00000517880 ADORA1P30542 326 aa12.83□□□□□ -0.36
CPEB4-203ENST00000517880 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.36
CPEB4-203ENST00000517880 CTNNA3Q9UI47 895 aa12.83□□□□□ -0.36
CPEB4-203ENST00000517880 DDX60Q8IY21 1712 aaKnown RBP12.83□□□□□ -0.36
CPEB4-203ENST00000517880 LY75O60449 1722 aa12.82□□□□□ -0.36
CPEB4-203ENST00000517880 TRAK2O60296 914 aa12.82□□□□□ -0.36
CPEB4-203ENST00000517880 CLCN6P51797 869 aa12.82□□□□□ -0.36
CPEB4-203ENST00000517880 ADCK5Q3MIX3 580 aa12.82□□□□□ -0.36
CPEB4-203ENST00000517880 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
CPEB4-203ENST00000517880 BAG4O95429 457 aaKnown RBP12.81□□□□□ -0.36
CPEB4-203ENST00000517880 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
CPEB4-203ENST00000517880 ZAP70P43403 619 aa12.81□□□□□ -0.36
CPEB4-203ENST00000517880 APPBP2Q92624 585 aa12.81□□□□□ -0.36
CPEB4-203ENST00000517880 CHMP4CQ96CF2 233 aa12.81□□□□□ -0.36
CPEB4-203ENST00000517880 NEK1Q96PY6 1258 aa12.81□□□□□ -0.36
CPEB4-203ENST00000517880 SETDB2Q96T68 719 aa12.81□□□□□ -0.36
CPEB4-203ENST00000517880 QTRT2Q9H974 415 aaKnown RBP12.81□□□□□ -0.36
CPEB4-203ENST00000517880 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
CPEB4-203ENST00000517880 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
CPEB4-203ENST00000517880 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
CPEB4-203ENST00000517880 FAM177BA6PVY3 158 aa12.8□□□□□ -0.36
CPEB4-203ENST00000517880 BRD1O95696 1058 aa12.8□□□□□ -0.36
CPEB4-203ENST00000517880 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
CPEB4-203ENST00000517880 CCDC102BQ68D86 513 aa12.8□□□□□ -0.36
CPEB4-203ENST00000517880 TPTE2Q6XPS3 522 aa12.8□□□□□ -0.36
CPEB4-203ENST00000517880 ANKRD18AQ8IVF6 992 aa12.8□□□□□ -0.36
CPEB4-203ENST00000517880 SEC62Q99442 399 aaKnown RBP12.8□□□□□ -0.36
CPEB4-203ENST00000517880 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
CPEB4-203ENST00000517880 GNPATO15228 680 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 HSPD1P10809 573 aaKnown RBP12.79□□□□□ -0.36
CPEB4-203ENST00000517880 MCAMP43121 646 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 UBE3CQ15386 1083 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 ERFEQ4G0M1 354 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 TRAPPC3LQ5T215 181 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
CPEB4-203ENST00000517880 SMC3Q9UQE7 1217 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
CPEB4-203ENST00000517880 UBE4AQ14139 1066 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 SLC27A3Q5K4L6 730 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 TBC1D9BQ66K14 1250 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 CCDC129Q6ZRS4 1044 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 NOL8Q76FK4 1167 aaKnown RBP12.79□□□□□ -0.36
CPEB4-203ENST00000517880 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 NLRP3Q96P20 1036 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 MAST3O60307 1309 aa12.79□□□□□ -0.36
CPEB4-203ENST00000517880 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
CPEB4-203ENST00000517880 CYP21A2P08686 494 aa12.78□□□□□ -0.36
CPEB4-203ENST00000517880 RFC4P35249 363 aa12.78□□□□□ -0.36
CPEB4-203ENST00000517880 ADD2P35612 726 aa12.78□□□□□ -0.36
CPEB4-203ENST00000517880 SCARF1Q14162 830 aa12.78□□□□□ -0.36
CPEB4-203ENST00000517880 WASHC4Q2M389 1173 aa12.78□□□□□ -0.36
CPEB4-203ENST00000517880 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
CPEB4-203ENST00000517880 ARHGEF1Q92888 912 aaKnown RBP12.78□□□□□ -0.36
CPEB4-203ENST00000517880 OSBP2Q969R2 916 aa12.78□□□□□ -0.36
CPEB4-203ENST00000517880 GNL3LQ9NVN8 582 aaKnown RBP12.78□□□□□ -0.36
CPEB4-203ENST00000517880 AKAP11Q9UKA4 1901 aa12.78□□□□□ -0.36
CPEB4-203ENST00000517880 ZDHHC9Q9Y397 364 aa12.78□□□□□ -0.36
CPEB4-203ENST00000517880 MYH7P12883 1935 aa12.77□□□□□ -0.37
CPEB4-203ENST00000517880 M0R2C6 588 aa12.77□□□□□ -0.37
CPEB4-203ENST00000517880 ZBTB22O15209 634 aa12.77□□□□□ -0.37
CPEB4-203ENST00000517880 PHKA1P46020 1223 aa12.77□□□□□ -0.37
CPEB4-203ENST00000517880 CHRNDQ07001 517 aa12.77□□□□□ -0.37
CPEB4-203ENST00000517880 MAP3K12Q12852 859 aa12.77□□□□□ -0.37
CPEB4-203ENST00000517880 DHX32Q7L7V1 743 aaKnown RBP12.77□□□□□ -0.37
CPEB4-203ENST00000517880 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms