RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 NRLP54845 237 aa8.37□□□□□ -1.07
CTNNA1-202ENST00000517533 GAS6Q14393 721 aa8.37□□□□□ -1.07
CTNNA1-202ENST00000517533 HS2ST1Q7LGA3 356 aa8.37□□□□□ -1.07
CTNNA1-202ENST00000517533 IRX2Q9BZI1 471 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-202ENST00000517533 RASSF4Q9H2L5 321 aa8.37□□□□□ -1.07
CTNNA1-202ENST00000517533 GPLD1P80108 840 aa8.36□□□□□ -1.07
CTNNA1-202ENST00000517533 SYT9Q86SS6 491 aa8.36□□□□□ -1.07
CTNNA1-202ENST00000517533 NXPE3Q969Y0 559 aa8.36□□□□□ -1.07
CTNNA1-202ENST00000517533 CWC22Q9HCG8 908 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-202ENST00000517533 KBTBD4Q9NVX7 518 aa8.36□□□□□ -1.07
CTNNA1-202ENST00000517533 DNAJB12Q9NXW2 375 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-202ENST00000517533 TTF2Q9UNY4 1162 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-202ENST00000517533 TRAK1Q9UPV9 953 aa8.36□□□□□ -1.07
CTNNA1-202ENST00000517533 LOC102724428A0A0B4J2F2 783 aa8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 C11orf95C9JLR9 678 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 SIK1P57059 783 aa8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 PCBP4P57723 403 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 FAAP100Q0VG06 881 aa8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 ZNF654Q8IZM8 581 aa8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 POLR3GLQ9BT43 218 aa8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 BHLHE41Q9C0J9 482 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 IGFLR1Q9H665 355 aa8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 EFCC1Q9HA90 598 aa8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 NAGPAQ9UK23 515 aa8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 AKAP2Q9Y2D5 859 aa8.35□□□□□ -1.07
CTNNA1-202ENST00000517533 CELA3AP09093 270 aa8.34□□□□□ -1.07
CTNNA1-202ENST00000517533 ITPKAP23677 461 aa8.34□□□□□ -1.07
CTNNA1-202ENST00000517533 SLC43A3Q8NBI5 491 aa8.34□□□□□ -1.07
CTNNA1-202ENST00000517533 NANOS1Q8WY41 292 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-202ENST00000517533 POP1Q99575 1024 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-202ENST00000517533 MDFIQ99750 246 aa8.34□□□□□ -1.07
CTNNA1-202ENST00000517533 ADAMTS1Q9UHI8 967 aa8.34□□□□□ -1.07
CTNNA1-202ENST00000517533 ZNF468Q5VIY5 522 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 GIMAP6Q6P9H5 292 aa8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 TPTE2Q6XPS3 522 aa8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 DTHD1Q6ZMT9 781 aa8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 TMEM102Q8N9M5 508 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 NOC4LQ9BVI4 516 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 PBX4Q9BYU1 374 aa8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 MUC3BQ9H195 1237 aa8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 PHF24Q9UPV7 400 aa8.33□□□□□ -1.08
CTNNA1-202ENST00000517533 A0A096LPE4 126 aa8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 A0A1W2PPZ6 126 aa8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 PAGE1O75459 146 aa8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 TBC1D8BQ0IIM8 1120 aa8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 PAK2Q13177 524 aa8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 MAP3K11Q16584 847 aa8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 SV2AQ7L0J3 742 aa8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 GMLQ99445 158 aa8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
CTNNA1-202ENST00000517533 PDE2AO00408 941 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 ENC1O14682 589 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 GJA8P48165 433 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 RASIP1Q5U651 963 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 DHX37Q8IY37 1157 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 TRERF1Q96PN7 1200 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 RSRP1Q9BUV0 290 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 UBE2OQ9C0C9 1292 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 ZNF576Q9H609 170 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 PRKAG2Q9UGJ0 569 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 PRR12Q9ULL5 1215 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 PPM1HQ9ULR3 514 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 TLR6Q9Y2C9 796 aa8.31□□□□□ -1.08
CTNNA1-202ENST00000517533 MINDY4BA8MYZ0 360 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 SIN3BO75182 1162 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 BMP4P12644 408 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 CPB1P15086 417 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 GARTP22102 1010 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 PERM1Q5SV97 790 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 FCHSD1Q86WN1 690 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 ANKRD13AQ8IZ07 590 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 ASAP3Q8TDY4 903 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 DHX38Q92620 1227 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 TANGO6Q9C0B7 1094 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 SEC31BQ9NQW1 1179 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 SLC6A14Q9UN76 642 aa8.3□□□□□ -1.08
CTNNA1-202ENST00000517533 ANKRD62A6NC57 917 aa8.29□□□□□ -1.08
CTNNA1-202ENST00000517533 XRCC5P13010 732 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-202ENST00000517533 DNAJA1P31689 397 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-202ENST00000517533 Q6ZNB5 142 aa8.29□□□□□ -1.08
CTNNA1-202ENST00000517533 PHC3Q8NDX5 983 aa8.29□□□□□ -1.08
CTNNA1-202ENST00000517533 TNFRSF25Q93038 417 aa8.29□□□□□ -1.08
CTNNA1-202ENST00000517533 RHOVQ96L33 236 aa8.29□□□□□ -1.08
CTNNA1-202ENST00000517533 NECAB3Q96P71 396 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-202ENST00000517533 PPP4R2Q9NY27 417 aa8.29□□□□□ -1.08
CTNNA1-202ENST00000517533 NCLP19338 710 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 EIF2AK2P19525 551 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 ZNF157P51786 506 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 RNFT1Q5M7Z0 435 aa8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 VN1R5Q7Z5H4 357 aa8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 FAM35AQ86V20 835 aa8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 MCF2L2Q86YR7 1114 aa8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 EAF1Q96JC9 268 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 SPACA7Q96KW9 195 aa8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 TMEM74Q96NL1 305 aa8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 LPIN3Q9BQK8 851 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms