RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ARHGAP27Q6ZUM4 889 aa12.22□□□□□ -0.45
CLN8-202ENST00000517514 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
CLN8-202ENST00000517514 GCC1Q96CN9 775 aa12.22□□□□□ -0.45
CLN8-202ENST00000517514 KIF1BPQ96EK5 621 aa12.22□□□□□ -0.45
CLN8-202ENST00000517514 ZNF277Q9NRM2 450 aaPredicted RBP12.22□□□□□ -0.45
CLN8-202ENST00000517514 FPGT-TNNI3KV9GXZ4 949 aa12.22□□□□□ -0.45
CLN8-202ENST00000517514 MED23Q9ULK4 1368 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 SALL3Q9BXA9 1300 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 A0A1B0GUL7 405 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 C6orf229H3BNL8 230 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 NUCB1Q02818 461 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 PUM3Q15397 648 aaKnown RBP12.21□□□□□ -0.45
CLN8-202ENST00000517514 GPR162Q16538 588 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 ERC1Q8IUD2 1116 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 OTUD7AQ8TE49 926 aaPredicted RBP12.21□□□□□ -0.45
CLN8-202ENST00000517514 LPIN2Q92539 896 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 FAM84BQ96KN1 310 aaPredicted RBP12.21□□□□□ -0.45
CLN8-202ENST00000517514 DBNDD2Q9BQY9 259 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 TAOK3Q9H2K8 898 aa12.21□□□□□ -0.45
CLN8-202ENST00000517514 DBNLQ9UJU6 430 aaKnown RBP12.21□□□□□ -0.45
CLN8-202ENST00000517514 MYO5AQ9Y4I1 1855 aaKnown RBP12.21□□□□□ -0.46
CLN8-202ENST00000517514 RIMBP2O15034 1052 aa12.2□□□□□ -0.46
CLN8-202ENST00000517514 GYG1P46976 350 aa12.2□□□□□ -0.46
CLN8-202ENST00000517514 KIAA2012Q0VF49 1180 aa12.2□□□□□ -0.46
CLN8-202ENST00000517514 AOC3Q16853 763 aa12.2□□□□□ -0.46
CLN8-202ENST00000517514 ANKRD45Q5TZF3 282 aa12.2□□□□□ -0.46
CLN8-202ENST00000517514 FBXO33Q7Z6M2 555 aa12.2□□□□□ -0.46
CLN8-202ENST00000517514 XAGE2Q96GT9 111 aa12.2□□□□□ -0.46
CLN8-202ENST00000517514 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
CLN8-202ENST00000517514 COL1A1P02452 1464 aaPredicted RBP12.2□□□□□ -0.46
CLN8-202ENST00000517514 YDJCA8MPS7 323 aa12.19□□□□□ -0.46
CLN8-202ENST00000517514 PDE4AP27815 886 aa12.19□□□□□ -0.46
CLN8-202ENST00000517514 IARSP41252 1262 aaKnown RBP12.19□□□□□ -0.46
CLN8-202ENST00000517514 BCAMP50895 628 aa12.19□□□□□ -0.46
CLN8-202ENST00000517514 SKAP1Q86WV1 359 aa12.19□□□□□ -0.46
CLN8-202ENST00000517514 CCDC136Q96JN2 1154 aa12.19□□□□□ -0.46
CLN8-202ENST00000517514 AKAP2Q9Y2D5 859 aa12.19□□□□□ -0.46
CLN8-202ENST00000517514 SLC5A1P13866 664 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 PHKA1P46020 1223 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 KCNJ4P48050 445 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 DOK7Q18PE1 504 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 WASHC4Q2M389 1173 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 AACSQ86V21 672 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 SUPT20HQ8NEM7 779 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 KCNQ5Q9NR82 932 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
CLN8-202ENST00000517514 PPIP5K2O43314 1243 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 GRIN3BO60391 1043 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 IFIT1P09914 478 aaKnown RBP12.17□□□□□ -0.46
CLN8-202ENST00000517514 IL1R1P14778 569 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 LMNB1P20700 586 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 SCARF1Q14162 830 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 CENPQQ7L2Z9 268 aaPredicted RBP12.17□□□□□ -0.46
CLN8-202ENST00000517514 CHD1LQ86WJ1 897 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 TDRD7Q8NHU6 1098 aaKnown RBP12.17□□□□□ -0.46
CLN8-202ENST00000517514 NEUROD6Q96NK8 337 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 EYA3Q99504 573 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 ZC3H12CQ9C0D7 883 aaKnown RBP12.17□□□□□ -0.46
CLN8-202ENST00000517514 TMX4Q9H1E5 349 aaPredicted RBP12.17□□□□□ -0.46
CLN8-202ENST00000517514 VPS33BQ9H267 617 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 DBNDD1Q9H9R9 158 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 CD209Q9NNX6 404 aa12.17□□□□□ -0.46
CLN8-202ENST00000517514 ZBTB22O15209 634 aa12.16□□□□□ -0.46
CLN8-202ENST00000517514 HIBADHP31937 336 aaKnown RBP12.16□□□□□ -0.46
CLN8-202ENST00000517514 CLASRPQ8N2M8 674 aaKnown RBP12.16□□□□□ -0.46
CLN8-202ENST00000517514 DOCK2Q92608 1830 aa12.16□□□□□ -0.46
CLN8-202ENST00000517514 FZD9O00144 591 aa12.15□□□□□ -0.46
CLN8-202ENST00000517514 ECE2O60344 883 aa12.15□□□□□ -0.46
CLN8-202ENST00000517514 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
CLN8-202ENST00000517514 C9orf131Q5VYM1 1079 aa12.15□□□□□ -0.46
CLN8-202ENST00000517514 TSHZ3Q63HK5 1081 aa12.15□□□□□ -0.46
CLN8-202ENST00000517514 LARGE2Q8N3Y3 721 aa12.15□□□□□ -0.46
CLN8-202ENST00000517514 COA1Q9GZY4 146 aa12.15□□□□□ -0.46
CLN8-202ENST00000517514 BCL11AQ9H165 835 aa12.15□□□□□ -0.46
CLN8-202ENST00000517514 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
CLN8-202ENST00000517514 MCAMP43121 646 aa12.14□□□□□ -0.47
CLN8-202ENST00000517514 PI16Q6UXB8 463 aa12.14□□□□□ -0.47
CLN8-202ENST00000517514 PLEKHM2Q8IWE5 1019 aa12.14□□□□□ -0.47
CLN8-202ENST00000517514 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
CLN8-202ENST00000517514 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
CLN8-202ENST00000517514 ZNF541Q9H0D2 1346 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 ADAMTSL1Q8N6G6 1762 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 IFIT2P09913 472 aaKnown RBP12.13□□□□□ -0.47
CLN8-202ENST00000517514 CXCL9Q07325 125 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 RASGRF1Q13972 1273 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 ZNF804AQ7Z570 1209 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 PODNQ7Z5L7 613 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 NIM1KQ8IY84 436 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 CERS5Q8N5B7 392 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 PI4K2BQ8TCG2 481 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 ZNF512BQ96KM6 892 aaPredicted RBP12.13□□□□□ -0.47
CLN8-202ENST00000517514 MXD3Q9BW11 206 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 HMG20BQ9P0W2 317 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 ZNRF3Q9ULT6 936 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 NDUFB9Q9Y6M9 179 aa12.13□□□□□ -0.47
CLN8-202ENST00000517514 FAM205AQ6ZU69 1335 aa12.12□□□□□ -0.47
CLN8-202ENST00000517514 ATP5JP18859 108 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms