RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 KANSL3Q9P2N6 904 aa5.31□□□□□ -1.56
SCARNA16.2-201ENST00000516520 SALL4Q9UJQ4 1053 aa5.31□□□□□ -1.56
SCARNA16.2-201ENST00000516520 H3BRJ5 948 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 FSCN2O14926 492 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 GSC2O15499 205 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 FAM13AO94988 1023 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 USP5P45974 858 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 EHHADHQ08426 723 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 SF3B2Q13435 895 aaKnown RBP5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 UVSSAQ2YD98 709 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 C8orf34Q49A92 452 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 TXNDC11Q6PKC3 985 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 ACAD11Q709F0 780 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 AGGF1Q8N302 714 aaeCLIP5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 GALNT11Q8NCW6 608 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 SEC31BQ9NQW1 1179 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 CNTN3Q9P232 1028 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 RNF112Q9ULX5 631 aa5.3□□□□□ -1.56
SCARNA16.2-201ENST00000516520 NPR3P17342 541 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 FSTP19883 344 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 EPHA1P21709 976 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 PIP4K2BP78356 416 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 AAMPQ13685 434 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 B4GALNT3Q6L9W6 998 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 C1orf127Q8N9H9 656 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 SNX29Q8TEQ0 813 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 POP1Q99575 1024 aaKnown RBP5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 CARD10Q9BWT7 1032 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 GGNBP2Q9H3C7 697 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 OSGEPQ9NPF4 335 aa5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 SH2B1Q9NRF2 756 aaPredicted RBP5.29□□□□□ -1.56
SCARNA16.2-201ENST00000516520 PDE2AO00408 941 aaPredicted RBP5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 DHX15O43143 795 aaKnown RBP5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 CDC25BP30305 580 aa5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 ARL4DP49703 201 aa5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 DUOXA2Q1HG44 320 aa5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 CHRDQ9H2X0 955 aa5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 DZANK1Q9NVP4 752 aa5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 POLIQ9UNA4 740 aa5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 USTQ9Y2C2 406 aa5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 RAXQ9Y2V3 346 aa5.28□□□□□ -1.56
SCARNA16.2-201ENST00000516520 HYAL3O43820 417 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.2-201ENST00000516520 PHACTR2O75167 634 aa5.27□□□□□ -1.57
SCARNA16.2-201ENST00000516520 WISP1O95388 367 aa5.27□□□□□ -1.57
SCARNA16.2-201ENST00000516520 EDN3P14138 238 aa5.27□□□□□ -1.57
SCARNA16.2-201ENST00000516520 TMEM102Q8N9M5 508 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.2-201ENST00000516520 UTP4Q969X6 686 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.2-201ENST00000516520 KCNK4Q9NYG8 393 aa5.27□□□□□ -1.57
SCARNA16.2-201ENST00000516520 A6NHS1 94 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 NFKBIEO00221 500 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 TM4SF5O14894 197 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 EIF4EBP3O60516 100 aaPredicted RBP5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 TNFRSF21O75509 655 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 FKBP4Q02790 459 aaKnown RBP eCLIP5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 MTMR3Q13615 1198 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 ANKRD34AQ69YU3 496 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 ADAMTSL4Q6UY14 1074 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 KIAA1211Q6ZU35 1233 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 C14orf37Q86TY3 774 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 FOXD4L4Q8WXT5 416 aaPredicted RBP5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 UBL7Q96S82 380 aaPredicted RBP5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 RNF208Q9H0X6 261 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 C1orf115Q9H7X2 142 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 STOML1Q9UBI4 398 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 SOX13Q9UN79 622 aa5.26□□□□□ -1.57
SCARNA16.2-201ENST00000516520 SART1O43290 800 aaKnown RBP5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 ABL1P00519 1130 aa5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 IGLV1-40P01703 118 aa5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 ACPPP15309 386 aa5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 UBASH3BQ8TF42 649 aa5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 BSNDQ8WZ55 320 aa5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 KLHDC7BQ96G42 594 aa5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 FAM46AQ96IP4 442 aaKnown RBP5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 OSMRQ99650 979 aa5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 AMOTL2Q9Y2J4 779 aa5.25□□□□□ -1.57
SCARNA16.2-201ENST00000516520 EREGO14944 169 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 FZD6O60353 706 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 ADAM11O75078 769 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 C19orf57Q0VDD7 668 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 PHLDB3Q6NSJ2 640 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 GJD3Q8N144 294 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 ARMC10Q8N2F6 343 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 SLC7A3Q8WY07 619 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 NXPE3Q969Y0 559 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 MYRFLQ96LU7 910 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 ZKSCAN3Q9BRR0 538 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 RUSC1Q9BVN2 902 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 PCMTD2Q9NV79 361 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 EGFL7Q9UHF1 273 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 HIF3AQ9Y2N7 669 aa5.24□□□□□ -1.57
SCARNA16.2-201ENST00000516520 DDX3YO15523 660 aaKnown RBP5.23□□□□□ -1.57
SCARNA16.2-201ENST00000516520 NLRP12P59046 1061 aa5.23□□□□□ -1.57
SCARNA16.2-201ENST00000516520 IKBKEQ14164 716 aa5.23□□□□□ -1.57
SCARNA16.2-201ENST00000516520 FDX2Q6P4F2 183 aa5.23□□□□□ -1.57
SCARNA16.2-201ENST00000516520 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.23□□□□□ -1.57
SCARNA16.2-201ENST00000516520 HHIPQ96QV1 700 aa5.23□□□□□ -1.57
SCARNA16.2-201ENST00000516520 BHLHE41Q9C0J9 482 aaPredicted RBP5.23□□□□□ -1.57
SCARNA16.2-201ENST00000516520 SOX17Q9H6I2 414 aaPredicted RBP5.23□□□□□ -1.57
SCARNA16.2-201ENST00000516520 FOXD3Q9UJU5 478 aaPredicted RBP5.23□□□□□ -1.57
SCARNA16.2-201ENST00000516520 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms