RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 CWC27Q6UX04 472 aaKnown RBP11.42□□□□□ -0.58
TPM3-222ENST00000515609 SMIM5Q71RC9 77 aa11.42□□□□□ -0.58
TPM3-222ENST00000515609 ERICH6Q7L0X2 663 aa11.42□□□□□ -0.58
TPM3-222ENST00000515609 QSER1Q2KHR3 1735 aa11.42□□□□□ -0.58
TPM3-222ENST00000515609 XDHP47989 1333 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 PDS5AQ29RF7 1337 aaKnown RBP11.41□□□□□ -0.58
TPM3-222ENST00000515609 MCM2P49736 904 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 MAP3K12Q12852 859 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 MCMDC2Q4G0Z9 681 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 HSCBQ8IWL3 235 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 SNRKQ9NRH2 765 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 ANKIB1Q9P2G1 1089 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 DENND2AQ9ULE3 1009 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 TUBGCP6Q96RT7 1819 aa11.41□□□□□ -0.58
TPM3-222ENST00000515609 RNF113AO15541 343 aaKnown RBP11.4□□□□□ -0.58
TPM3-222ENST00000515609 FRAT2O75474 233 aaPredicted RBP11.4□□□□□ -0.58
TPM3-222ENST00000515609 ATP2B4P23634 1241 aa11.4□□□□□ -0.58
TPM3-222ENST00000515609 DDR1Q08345 913 aa11.4□□□□□ -0.58
TPM3-222ENST00000515609 WASHC4Q2M389 1173 aa11.4□□□□□ -0.58
TPM3-222ENST00000515609 ZGPATQ8N5A5 531 aaKnown RBP11.4□□□□□ -0.58
TPM3-222ENST00000515609 SPATA5Q8NB90 893 aa11.4□□□□□ -0.58
TPM3-222ENST00000515609 CELF1Q92879 486 aaKnown RBP11.4□□□□□ -0.58
TPM3-222ENST00000515609 HMG20BQ9P0W2 317 aa11.4□□□□□ -0.58
TPM3-222ENST00000515609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.4□□□□□ -0.58
TPM3-222ENST00000515609 ZNF804BA4D1E1 1349 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 H0YIN7 160 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 TAF5LO75529 589 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 ADORA1P30542 326 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 KRT32Q14532 448 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 SPTY2D1Q68D10 685 aaPredicted RBP11.39□□□□□ -0.59
TPM3-222ENST00000515609 CC2D2BQ6DHV5 1058 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 C15orf52Q6ZUT6 534 aaKnown RBP11.39□□□□□ -0.59
TPM3-222ENST00000515609 ZNF804AQ7Z570 1209 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 SP8Q8IXZ3 490 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 HELBQ8NG08 1087 aaPredicted RBP11.39□□□□□ -0.59
TPM3-222ENST00000515609 SNX21Q969T3 373 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 MASTLQ96GX5 879 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 CTNNA3Q9UI47 895 aa11.39□□□□□ -0.59
TPM3-222ENST00000515609 U3KPZ7 1027 aaPredicted RBP11.39□□□□□ -0.59
TPM3-222ENST00000515609 ARAP2Q8WZ64 1704 aa11.38□□□□□ -0.59
TPM3-222ENST00000515609 PSMA5P28066 241 aa11.38□□□□□ -0.59
TPM3-222ENST00000515609 HIBADHP31937 336 aaKnown RBP11.38□□□□□ -0.59
TPM3-222ENST00000515609 NMIQ13287 307 aaPredicted RBP11.38□□□□□ -0.59
TPM3-222ENST00000515609 UBE3CQ15386 1083 aa11.38□□□□□ -0.59
TPM3-222ENST00000515609 STYK1Q6J9G0 422 aa11.38□□□□□ -0.59
TPM3-222ENST00000515609 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
TPM3-222ENST00000515609 APPBP2Q92624 585 aa11.38□□□□□ -0.59
TPM3-222ENST00000515609 CNKSR1Q969H4 720 aa11.38□□□□□ -0.59
TPM3-222ENST00000515609 PODXL2Q9NZ53 605 aa11.38□□□□□ -0.59
TPM3-222ENST00000515609 GGA1Q9UJY5 639 aa11.38□□□□□ -0.59
TPM3-222ENST00000515609 CCDC171Q6TFL3 1326 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 SRGNP10124 158 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 HSPA4P34932 840 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 MCAMP43121 646 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 ZAP70P43403 619 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 PHKA1P46020 1223 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 ZMYM1Q5SVZ6 1142 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 CERS3Q8IU89 383 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 IL17RAQ96F46 866 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 DSCC1Q9BVC3 393 aa11.37□□□□□ -0.59
TPM3-222ENST00000515609 NRXN2Q9P2S2 1712 aa11.36□□□□□ -0.59
TPM3-222ENST00000515609 PPEF1O14829 653 aaPredicted RBP11.36□□□□□ -0.59
TPM3-222ENST00000515609 IDH1O75874 414 aaKnown RBP11.36□□□□□ -0.59
TPM3-222ENST00000515609 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
TPM3-222ENST00000515609 GNAT2P19087 354 aa11.36□□□□□ -0.59
TPM3-222ENST00000515609 POLD1P28340 1107 aa11.36□□□□□ -0.59
TPM3-222ENST00000515609 FBXO33Q7Z6M2 555 aa11.36□□□□□ -0.59
TPM3-222ENST00000515609 WDR66Q8TBY9 1149 aa11.36□□□□□ -0.59
TPM3-222ENST00000515609 MAP4K1Q92918 833 aa11.36□□□□□ -0.59
TPM3-222ENST00000515609 EYA3Q99504 573 aa11.36□□□□□ -0.59
TPM3-222ENST00000515609 LSG1Q9H089 658 aaKnown RBP11.36□□□□□ -0.59
TPM3-222ENST00000515609 LRP2BPQ9P2M1 347 aa11.36□□□□□ -0.59
TPM3-222ENST00000515609 NSFL1CQ9UNZ2 370 aaKnown RBP11.36□□□□□ -0.59
TPM3-222ENST00000515609 ATP6V0A2Q9Y487 856 aa11.36□□□□□ -0.59
TPM3-222ENST00000515609 HMGB1P09429 215 aaKnown RBP11.35□□□□□ -0.59
TPM3-222ENST00000515609 BCAMP50895 628 aa11.35□□□□□ -0.59
TPM3-222ENST00000515609 RASGRF1Q13972 1273 aa11.35□□□□□ -0.59
TPM3-222ENST00000515609 SLC9C2Q5TAH2 1124 aa11.35□□□□□ -0.59
TPM3-222ENST00000515609 CCDC24Q8N4L8 307 aa11.35□□□□□ -0.59
TPM3-222ENST00000515609 CHMP4CQ96CF2 233 aa11.35□□□□□ -0.59
TPM3-222ENST00000515609 FAM227BQ96M60 508 aa11.35□□□□□ -0.59
TPM3-222ENST00000515609 TM6SF1Q9BZW5 370 aa11.35□□□□□ -0.59
TPM3-222ENST00000515609 ANO8Q9HCE9 1232 aaPredicted RBP11.35□□□□□ -0.59
TPM3-222ENST00000515609 MED23Q9ULK4 1368 aa11.35□□□□□ -0.59
TPM3-222ENST00000515609 RPAP1Q9BWH6 1393 aaPredicted RBP11.34□□□□□ -0.59
TPM3-222ENST00000515609 A0A0D9SFI3 127 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 CYP2E1P05181 493 aaPredicted RBP11.34□□□□□ -0.59
TPM3-222ENST00000515609 ADD2P35612 726 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 GSTO1P78417 241 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 SOGA3Q5TF21 947 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 DEFB132Q7Z7B7 95 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 C2CD5Q86YS7 1000 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 SUPT20HQ8NEM7 779 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 FAM84BQ96KN1 310 aaPredicted RBP11.34□□□□□ -0.59
TPM3-222ENST00000515609 NACAP1Q9BZK3 213 aa11.34□□□□□ -0.59
TPM3-222ENST00000515609 DUOX1Q9NRD9 1551 aa11.33□□□□□ -0.6
TPM3-222ENST00000515609 G3V3G9 751 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms