RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 ZNF34Q8IZ26 560 aa17.88■□□□□ 0.45
SMAD1-216ENST00000515527 ARHGAP39Q9C0H5 1083 aa17.88■□□□□ 0.45
SMAD1-216ENST00000515527 ZFYVE28Q9HCC9 887 aa17.88■□□□□ 0.45
SMAD1-216ENST00000515527 ZMYND8Q9ULU4 1186 aaPredicted RBP17.88■□□□□ 0.45
SMAD1-216ENST00000515527 TTLL7Q6ZT98 887 aa17.87■□□□□ 0.45
SMAD1-216ENST00000515527 UTP14AQ9BVJ6 771 aaKnown RBP17.87■□□□□ 0.45
SMAD1-216ENST00000515527 ZC3H12CQ9C0D7 883 aaKnown RBP17.87■□□□□ 0.45
SMAD1-216ENST00000515527 BIN2Q9UBW5 565 aaPredicted RBP17.87■□□□□ 0.45
SMAD1-216ENST00000515527 ALPK3Q96L96 1907 aa17.87■□□□□ 0.45
SMAD1-216ENST00000515527 PRMT2P55345 433 aa17.86■□□□□ 0.45
SMAD1-216ENST00000515527 PARP10Q53GL7 1025 aa17.86■□□□□ 0.45
SMAD1-216ENST00000515527 MORC1Q86VD1 984 aa17.86■□□□□ 0.45
SMAD1-216ENST00000515527 U2AF1L4Q8WU68 220 aaKnown RBP17.86■□□□□ 0.45
SMAD1-216ENST00000515527 HCLS1P14317 486 aaPredicted RBP17.85■□□□□ 0.45
SMAD1-216ENST00000515527 GPSM2P81274 684 aa17.85■□□□□ 0.45
SMAD1-216ENST00000515527 FAM109BQ6ICB4 259 aaPredicted RBP17.85■□□□□ 0.45
SMAD1-216ENST00000515527 C7orf61Q8IZ16 206 aa17.85■□□□□ 0.45
SMAD1-216ENST00000515527 UBE2OQ9C0C9 1292 aaKnown RBP17.85■□□□□ 0.45
SMAD1-216ENST00000515527 POTEB2H3BUK9 544 aa17.84■□□□□ 0.45
SMAD1-216ENST00000515527 GNRH1P01148 92 aa17.84■□□□□ 0.45
SMAD1-216ENST00000515527 GRK4P32298 578 aa17.84■□□□□ 0.45
SMAD1-216ENST00000515527 MAGEA10P43363 369 aaPredicted RBP17.84■□□□□ 0.45
SMAD1-216ENST00000515527 GAS2L2Q8NHY3 880 aa17.84■□□□□ 0.45
SMAD1-216ENST00000515527 GMLQ99445 158 aa17.84■□□□□ 0.45
SMAD1-216ENST00000515527 TESPA1A2RU30 521 aaPredicted RBP17.83■□□□□ 0.44
SMAD1-216ENST00000515527 WNT10BO00744 389 aa17.83■□□□□ 0.44
SMAD1-216ENST00000515527 PPP1R12BO60237 982 aaPredicted RBP17.83■□□□□ 0.44
SMAD1-216ENST00000515527 GJA5P36382 358 aa17.83■□□□□ 0.44
SMAD1-216ENST00000515527 LACTBP83111 547 aaPredicted RBP17.83■□□□□ 0.44
SMAD1-216ENST00000515527 PSME4Q14997 1843 aa17.83■□□□□ 0.44
SMAD1-216ENST00000515527 CEMIPQ8WUJ3 1361 aa17.82■□□□□ 0.44
SMAD1-216ENST00000515527 SYN1P17600 705 aa17.82■□□□□ 0.44
SMAD1-216ENST00000515527 UBXN2AP68543 259 aa17.82■□□□□ 0.44
SMAD1-216ENST00000515527 MAP3K11Q16584 847 aa17.82■□□□□ 0.44
SMAD1-216ENST00000515527 GIGYF2Q6Y7W6 1299 aaKnown RBP17.82■□□□□ 0.44
SMAD1-216ENST00000515527 APOBEC3FQ8IUX4 373 aaKnown RBP17.82■□□□□ 0.44
SMAD1-216ENST00000515527 TBC1D16Q8TBP0 767 aa17.82■□□□□ 0.44
SMAD1-216ENST00000515527 RAET1EQ8TD07 263 aa17.82■□□□□ 0.44
SMAD1-216ENST00000515527 RRP7AQ9Y3A4 280 aaKnown RBP17.82■□□□□ 0.44
SMAD1-216ENST00000515527 SYNGAP1Q96PV0 1343 aa17.81■□□□□ 0.44
SMAD1-216ENST00000515527 TJAP1Q5JTD0 557 aa17.81■□□□□ 0.44
SMAD1-216ENST00000515527 POLR3GLQ9BT43 218 aa17.81■□□□□ 0.44
SMAD1-216ENST00000515527 RIPOR2Q9Y4F9 1068 aa17.81■□□□□ 0.44
SMAD1-216ENST00000515527 WDHD1O75717 1129 aaPredicted RBP17.8■□□□□ 0.44
SMAD1-216ENST00000515527 SASH1O94885 1247 aa17.8■□□□□ 0.44
SMAD1-216ENST00000515527 SGPL1O95470 568 aa17.8■□□□□ 0.44
SMAD1-216ENST00000515527 TFRCP02786 760 aaKnown RBP17.8■□□□□ 0.44
SMAD1-216ENST00000515527 MYL6BP14649 208 aa17.8■□□□□ 0.44
SMAD1-216ENST00000515527 ZNF697Q5TEC3 545 aa17.8■□□□□ 0.44
SMAD1-216ENST00000515527 OGFOD1Q8N543 542 aa17.8■□□□□ 0.44
SMAD1-216ENST00000515527 TRIM47Q96LD4 638 aa17.8■□□□□ 0.44
SMAD1-216ENST00000515527 CDX2Q99626 313 aaPredicted RBP17.8■□□□□ 0.44
SMAD1-216ENST00000515527 USP17L3A6NCW0 530 aa17.78■□□□□ 0.44
SMAD1-216ENST00000515527 USP17L4A6NCW7 530 aa17.78■□□□□ 0.44
SMAD1-216ENST00000515527 USP17L1Q7RTZ2 530 aa17.78■□□□□ 0.44
SMAD1-216ENST00000515527 PAWRQ96IZ0 340 aaKnown RBP17.78■□□□□ 0.44
SMAD1-216ENST00000515527 SRRDQ9UH36 339 aa17.78■□□□□ 0.44
SMAD1-216ENST00000515527 CACNA1AO00555 2505 aa17.78■□□□□ 0.44
SMAD1-216ENST00000515527 UNCXA6NJT0 531 aa17.77■□□□□ 0.44
SMAD1-216ENST00000515527 BRI3BPQ8WY22 251 aa17.77■□□□□ 0.44
SMAD1-216ENST00000515527 CELF1Q92879 486 aaKnown RBP17.77■□□□□ 0.44
SMAD1-216ENST00000515527 UNC93B1Q9H1C4 597 aa17.77■□□□□ 0.44
SMAD1-216ENST00000515527 PIEZO1Q92508 2521 aa17.76■□□□□ 0.43
SMAD1-216ENST00000515527 CCL15-CCL14A0A0B4J2E2 113 aa17.76■□□□□ 0.43
SMAD1-216ENST00000515527 UFL1O94874 794 aa17.76■□□□□ 0.43
SMAD1-216ENST00000515527 HOXD10P28358 340 aa17.76■□□□□ 0.43
SMAD1-216ENST00000515527 IREB2P48200 963 aaKnown RBP17.76■□□□□ 0.43
SMAD1-216ENST00000515527 CCL15Q16663 113 aa17.76■□□□□ 0.43
SMAD1-216ENST00000515527 TLR2O60603 784 aa17.75■□□□□ 0.43
SMAD1-216ENST00000515527 NECAB2Q7Z6G3 386 aa17.75■□□□□ 0.43
SMAD1-216ENST00000515527 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
SMAD1-216ENST00000515527 OPTNQ96CV9 577 aa17.75■□□□□ 0.43
SMAD1-216ENST00000515527 MS4A4AQ96JQ5 239 aa17.75■□□□□ 0.43
SMAD1-216ENST00000515527 SSC5DA1L4H1 1573 aa17.74■□□□□ 0.43
SMAD1-216ENST00000515527 PSMC4P43686 418 aa17.74■□□□□ 0.43
SMAD1-216ENST00000515527 ANKRD13AQ8IZ07 590 aa17.74■□□□□ 0.43
SMAD1-216ENST00000515527 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
SMAD1-216ENST00000515527 DEFB129Q9H1M3 183 aa17.74■□□□□ 0.43
SMAD1-216ENST00000515527 ELP3Q9H9T3 547 aa17.74■□□□□ 0.43
SMAD1-216ENST00000515527 COL1A1P02452 1464 aaPredicted RBP17.74■□□□□ 0.43
SMAD1-216ENST00000515527 OSBPP22059 807 aa17.73■□□□□ 0.43
SMAD1-216ENST00000515527 MYLIPQ8WY64 445 aa17.73■□□□□ 0.43
SMAD1-216ENST00000515527 ANKIB1Q9P2G1 1089 aa17.73■□□□□ 0.43
SMAD1-216ENST00000515527 TRMT112Q9UI30 125 aaKnown RBP17.73■□□□□ 0.43
SMAD1-216ENST00000515527 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
SMAD1-216ENST00000515527 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
SMAD1-216ENST00000515527 FMNL1O95466 1100 aaPredicted RBP17.72■□□□□ 0.43
SMAD1-216ENST00000515527 FBXW7Q969H0 707 aa17.72■□□□□ 0.43
SMAD1-216ENST00000515527 DEFB118Q96PH6 123 aa17.72■□□□□ 0.43
SMAD1-216ENST00000515527 GGA1Q9UJY5 639 aa17.72■□□□□ 0.43
SMAD1-216ENST00000515527 HCN4Q9Y3Q4 1203 aa17.72■□□□□ 0.43
SMAD1-216ENST00000515527 CAPN2P17655 700 aa17.71■□□□□ 0.43
SMAD1-216ENST00000515527 GTF2A2P52657 109 aa17.71■□□□□ 0.43
SMAD1-216ENST00000515527 DIS3LQ8TF46 1054 aaKnown RBP17.71■□□□□ 0.43
SMAD1-216ENST00000515527 MXD3Q9BW11 206 aa17.71■□□□□ 0.43
SMAD1-216ENST00000515527 ARIH1Q9Y4X5 557 aaPredicted RBP17.71■□□□□ 0.43
SMAD1-216ENST00000515527 SH3TC1Q8TE82 1336 aa17.71■□□□□ 0.42
SMAD1-216ENST00000515527 NCOR1O75376 2440 aa17.7■□□□□ 0.42
SMAD1-216ENST00000515527 FOSL2P15408 326 aa17.7■□□□□ 0.42
SMAD1-216ENST00000515527 CTGFP29279 349 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms