RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 BSDC1Q9NW68 430 aaPredicted RBP20.3■□□□□ 0.84
LMNA-223ENST00000515459 PCDH10Q9P2E7 1040 aa20.3■□□□□ 0.84
LMNA-223ENST00000515459 WTIPA6NIX2 430 aaPredicted RBP20.29■□□□□ 0.84
LMNA-223ENST00000515459 UBE2Q2LH0YL09 131 aa20.29■□□□□ 0.84
LMNA-223ENST00000515459 TTLL11Q8NHH1 800 aa20.29■□□□□ 0.84
LMNA-223ENST00000515459 MINPP1Q9UNW1 487 aa20.29■□□□□ 0.84
LMNA-223ENST00000515459 MYO3BQ8WXR4 1341 aa20.28■□□□□ 0.84
LMNA-223ENST00000515459 NF2P35240 595 aa20.28■□□□□ 0.84
LMNA-223ENST00000515459 TTLL12Q14166 644 aaPredicted RBP20.28■□□□□ 0.84
LMNA-223ENST00000515459 PKN2Q16513 984 aaKnown RBP20.28■□□□□ 0.84
LMNA-223ENST00000515459 DACT2Q5SW24 774 aa20.28■□□□□ 0.84
LMNA-223ENST00000515459 PRAMEF18Q5VWM3 479 aa20.28■□□□□ 0.84
LMNA-223ENST00000515459 KSR2Q6VAB6 950 aa20.28■□□□□ 0.84
LMNA-223ENST00000515459 HDAC9Q9UKV0 1011 aa20.28■□□□□ 0.84
LMNA-223ENST00000515459 WNT10BO00744 389 aa20.27■□□□□ 0.84
LMNA-223ENST00000515459 TBC1D8O95759 1140 aa20.27■□□□□ 0.84
LMNA-223ENST00000515459 CCT4P50991 539 aaKnown RBP20.27■□□□□ 0.84
LMNA-223ENST00000515459 STRIP1Q5VSL9 837 aa20.27■□□□□ 0.84
LMNA-223ENST00000515459 ZNF296Q8WUU4 475 aaPredicted RBP20.27■□□□□ 0.84
LMNA-223ENST00000515459 FBXW7Q969H0 707 aa20.27■□□□□ 0.84
LMNA-223ENST00000515459 MXD3Q9BW11 206 aa20.27■□□□□ 0.84
LMNA-223ENST00000515459 GREM2Q9H772 168 aa20.27■□□□□ 0.84
LMNA-223ENST00000515459 HPS5Q9UPZ3 1129 aa20.27■□□□□ 0.84
LMNA-223ENST00000515459 PI4KAP2A4QPH2 592 aa20.26■□□□□ 0.83
LMNA-223ENST00000515459 IGKV5-2P06315 115 aa20.26■□□□□ 0.83
LMNA-223ENST00000515459 TM4SF4P48230 202 aa20.26■□□□□ 0.83
LMNA-223ENST00000515459 NEXNQ0ZGT2 675 aa20.26■□□□□ 0.83
LMNA-223ENST00000515459 PI4KAP1Q8N8J0 262 aa20.26■□□□□ 0.83
LMNA-223ENST00000515459 COA1Q9GZY4 146 aa20.26■□□□□ 0.83
LMNA-223ENST00000515459 MMP14P50281 582 aa20.25■□□□□ 0.83
LMNA-223ENST00000515459 LEMD3Q9Y2U8 911 aa20.25■□□□□ 0.83
LMNA-223ENST00000515459 GPR25O00155 361 aa20.23■□□□□ 0.83
LMNA-223ENST00000515459 IGHMBP2P38935 993 aaKnown RBP20.23■□□□□ 0.83
LMNA-223ENST00000515459 SREBF2Q12772 1141 aa20.23■□□□□ 0.83
LMNA-223ENST00000515459 CWF19L2Q2TBE0 894 aaKnown RBP20.23■□□□□ 0.83
LMNA-223ENST00000515459 NOM1Q5C9Z4 860 aaKnown RBP20.23■□□□□ 0.83
LMNA-223ENST00000515459 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
LMNA-223ENST00000515459 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
LMNA-223ENST00000515459 PRKRIP1Q9H875 184 aaPredicted RBP20.23■□□□□ 0.83
LMNA-223ENST00000515459 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
LMNA-223ENST00000515459 SASH1O94885 1247 aa20.22■□□□□ 0.83
LMNA-223ENST00000515459 MKRN3Q13064 507 aaKnown RBP20.22■□□□□ 0.83
LMNA-223ENST00000515459 PRPF38BQ5VTL8 546 aaKnown RBP20.22■□□□□ 0.83
LMNA-223ENST00000515459 TTLL5Q6EMB2 1281 aa20.22■□□□□ 0.83
LMNA-223ENST00000515459 ARMC9Q7Z3E5 817 aa20.22■□□□□ 0.83
LMNA-223ENST00000515459 TXNRD3Q86VQ6 643 aa20.22■□□□□ 0.83
LMNA-223ENST00000515459 APOBEC3FQ8IUX4 373 aaKnown RBP20.22■□□□□ 0.83
LMNA-223ENST00000515459 UBE3BQ7Z3V4 1068 aa20.21■□□□□ 0.83
LMNA-223ENST00000515459 ANKRD2Q9GZV1 360 aa20.21■□□□□ 0.83
LMNA-223ENST00000515459 ZNF804BA4D1E1 1349 aa20.21■□□□□ 0.83
LMNA-223ENST00000515459 H7C1W4 665 aa20.2■□□□□ 0.82
LMNA-223ENST00000515459 PTPN12Q05209 780 aaKnown RBP20.2■□□□□ 0.82
LMNA-223ENST00000515459 PRKG1Q13976 671 aa20.2■□□□□ 0.82
LMNA-223ENST00000515459 KIAA0825Q8IV33 1275 aa20.2■□□□□ 0.82
LMNA-223ENST00000515459 FBXO46Q6PJ61 603 aaPredicted RBP20.19■□□□□ 0.82
LMNA-223ENST00000515459 MPHOSPH8Q99549 860 aa20.19■□□□□ 0.82
LMNA-223ENST00000515459 CFHR5Q9BXR6 569 aa20.19■□□□□ 0.82
LMNA-223ENST00000515459 FKTNO75072 461 aa20.18■□□□□ 0.82
LMNA-223ENST00000515459 ITGA6P23229 1130 aa20.18■□□□□ 0.82
LMNA-223ENST00000515459 GTF2IP78347 998 aa20.18■□□□□ 0.82
LMNA-223ENST00000515459 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
LMNA-223ENST00000515459 ZBED3Q96IU2 234 aaPredicted RBP20.18■□□□□ 0.82
LMNA-223ENST00000515459 PLA2G12BQ9BX93 195 aa20.18■□□□□ 0.82
LMNA-223ENST00000515459 COL1A1P02452 1464 aaPredicted RBP20.18■□□□□ 0.82
LMNA-223ENST00000515459 KLRK1P26718 216 aa20.17■□□□□ 0.82
LMNA-223ENST00000515459 LDLRAD1Q5T700 205 aa20.17■□□□□ 0.82
LMNA-223ENST00000515459 SPRYD7Q5W111 196 aa20.17■□□□□ 0.82
LMNA-223ENST00000515459 ANGEL1Q9UNK9 670 aaKnown RBP20.17■□□□□ 0.82
LMNA-223ENST00000515459 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
LMNA-223ENST00000515459 ALDH1A1P00352 501 aa20.16■□□□□ 0.82
LMNA-223ENST00000515459 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
LMNA-223ENST00000515459 KCNJ4P48050 445 aa20.16■□□□□ 0.82
LMNA-223ENST00000515459 GCKRQ14397 625 aa20.16■□□□□ 0.82
LMNA-223ENST00000515459 TWISTNBQ3B726 338 aaPredicted RBP20.16■□□□□ 0.82
LMNA-223ENST00000515459 G2E3Q7L622 706 aa20.16■□□□□ 0.82
LMNA-223ENST00000515459 CSF1RP07333 972 aa20.15■□□□□ 0.82
LMNA-223ENST00000515459 CHRNDQ07001 517 aa20.15■□□□□ 0.82
LMNA-223ENST00000515459 R3HDMLQ9H3Y0 253 aa20.15■□□□□ 0.82
LMNA-223ENST00000515459 CD209Q9NNX6 404 aa20.15■□□□□ 0.82
LMNA-223ENST00000515459 MANSC4A6NHS7 340 aaPredicted RBP20.14■□□□□ 0.81
LMNA-223ENST00000515459 INHBEP58166 350 aa20.14■□□□□ 0.81
LMNA-223ENST00000515459 DLGAP5Q15398 846 aa20.14■□□□□ 0.81
LMNA-223ENST00000515459 DEFB129Q9H1M3 183 aa20.14■□□□□ 0.81
LMNA-223ENST00000515459 MYH16Q9H6N6 1097 aa20.14■□□□□ 0.81
LMNA-223ENST00000515459 LAMB1P07942 1786 aa20.13■□□□□ 0.81
LMNA-223ENST00000515459 CASP7P55210 303 aa20.13■□□□□ 0.81
LMNA-223ENST00000515459 SLC10A4Q96EP9 437 aa20.13■□□□□ 0.81
LMNA-223ENST00000515459 FZD1Q9UP38 647 aa20.13■□□□□ 0.81
LMNA-223ENST00000515459 CACNA1FO60840 1977 aa20.12■□□□□ 0.81
LMNA-223ENST00000515459 ANKRD18BA2A2Z9 1011 aa20.12■□□□□ 0.81
LMNA-223ENST00000515459 FLIIQ13045 1269 aa20.12■□□□□ 0.81
LMNA-223ENST00000515459 MAP3K11Q16584 847 aa20.12■□□□□ 0.81
LMNA-223ENST00000515459 MTMR14Q8NCE2 650 aa20.12■□□□□ 0.81
LMNA-223ENST00000515459 PPP2R3BQ9Y5P8 575 aa20.12■□□□□ 0.81
LMNA-223ENST00000515459 A0A1B0GUL6 1792 aa20.12■□□□□ 0.81
LMNA-223ENST00000515459 MYO1BO43795 1136 aa20.11■□□□□ 0.81
LMNA-223ENST00000515459 PPP1R12BO60237 982 aaPredicted RBP20.11■□□□□ 0.81
LMNA-223ENST00000515459 ZBTB48P10074 688 aaPredicted RBP20.11■□□□□ 0.81
LMNA-223ENST00000515459 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
LMNA-223ENST00000515459 IFNL1Q8IU54 200 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms