RNA–Protein interactions for RNA: ENST00000515339.5

PACRGL-233, Transcript of parkin coregulated like, human

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-233	ENST00000515339	CHRND	Q07001	517 aa		27.97	■■■□□ 2.07
PACRGL-233	ENST00000515339	USP17L1	Q7RTZ2	530 aa		27.97	■■■□□ 2.07
PACRGL-233	ENST00000515339	TLL2	Q9Y6L7	1015 aa		27.97	■■■□□ 2.07
PACRGL-233	ENST00000515339	GML	Q99445	158 aa		27.96	■■■□□ 2.07
PACRGL-233	ENST00000515339	CCER2	I3L3R5	266 aa		27.95	■■■□□ 2.06
PACRGL-233	ENST00000515339	GRM1	Q13255	1194 aa		27.95	■■■□□ 2.06
PACRGL-233	ENST00000515339	SSH1	Q8WYL5	1049 aa		27.95	■■■□□ 2.06
PACRGL-233	ENST00000515339	ASTN2	O75129	1339 aa	Predicted RBP	27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	KCNJ4	P48050	445 aa		27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	ZNF280A	P59817	542 aa	Predicted RBP	27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	CYP4F22	Q6NT55	531 aa		27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	KRT26	Q7Z3Y9	468 aa		27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	HELB	Q8NG08	1087 aa	Predicted RBP	27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	FBXW7	Q969H0	707 aa		27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	ZNF594	Q96JF6	807 aa	Predicted RBP	27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	CAPNS2	Q96L46	248 aa		27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	MXD3	Q9BW11	206 aa		27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	COA1	Q9GZY4	146 aa		27.94	■■■□□ 2.06
PACRGL-233	ENST00000515339	THSD7B	Q9C0I4	1608 aa		27.93	■■■□□ 2.06
PACRGL-233	ENST00000515339	ADM5	C9JUS6	153 aa		27.93	■■■□□ 2.06
PACRGL-233	ENST00000515339	SNAP23	O00161	211 aa		27.93	■■■□□ 2.06
PACRGL-233	ENST00000515339	FOXN1	O15353	648 aa		27.93	■■■□□ 2.06
PACRGL-233	ENST00000515339	TAF5L	O75529	589 aa		27.93	■■■□□ 2.06
PACRGL-233	ENST00000515339	SAPCD2	Q86UD0	394 aa		27.93	■■■□□ 2.06
PACRGL-233	ENST00000515339	DCPS	Q96C86	337 aa	Known RBP	27.93	■■■□□ 2.06
PACRGL-233	ENST00000515339	USP17L8	P0C7I0	530 aa		27.92	■■■□□ 2.06
PACRGL-233	ENST00000515339	CCDC57	Q2TAC2	916 aa		27.92	■■■□□ 2.06
PACRGL-233	ENST00000515339	SUCLG2	Q96I99	432 aa		27.92	■■■□□ 2.06
PACRGL-233	ENST00000515339	GGA3	Q9NZ52	723 aa		27.92	■■■□□ 2.06
PACRGL-233	ENST00000515339	NBPF7	P0C2Y1	421 aa	Predicted RBP	27.91	■■■□□ 2.06
PACRGL-233	ENST00000515339	DACT2	Q5SW24	774 aa		27.91	■■■□□ 2.06
PACRGL-233	ENST00000515339	PTPRC	P08575	1304 aa		27.91	■■■□□ 2.06
PACRGL-233	ENST00000515339	ECE1	P42892	770 aa		27.9	■■■□□ 2.06
PACRGL-233	ENST00000515339	TAF7L	Q5H9L4	462 aa		27.9	■■■□□ 2.06
PACRGL-233	ENST00000515339	AIDA	Q96BJ3	306 aa		27.9	■■■□□ 2.06
PACRGL-233	ENST00000515339	KAZALD1	Q96I82	304 aa		27.9	■■■□□ 2.06
PACRGL-233	ENST00000515339	MYOZ2	Q9NPC6	264 aa		27.9	■■■□□ 2.06
PACRGL-233	ENST00000515339	WBP1L	Q9NX94	342 aa		27.9	■■■□□ 2.06
PACRGL-233	ENST00000515339	SCARF1	Q14162	830 aa		27.89	■■■□□ 2.06
PACRGL-233	ENST00000515339	STRIP1	Q5VSL9	837 aa		27.89	■■■□□ 2.06
PACRGL-233	ENST00000515339	LDHAL6A	Q6ZMR3	332 aa		27.88	■■■□□ 2.05
PACRGL-233	ENST00000515339	TRMT2A	Q8IZ69	625 aa	Known RBP	27.88	■■■□□ 2.05
PACRGL-233	ENST00000515339	UTY	O14607	1347 aa		27.88	■■■□□ 2.05
PACRGL-233	ENST00000515339	IRS2	Q9Y4H2	1338 aa		27.88	■■■□□ 2.05
PACRGL-233	ENST00000515339	ANGEL2	Q5VTE6	544 aa	Known RBP	27.87	■■■□□ 2.05
PACRGL-233	ENST00000515339	CNNM1	Q9NRU3	951 aa		27.87	■■■□□ 2.05
PACRGL-233	ENST00000515339	PLIN1	O60240	522 aa		27.86	■■■□□ 2.05
PACRGL-233	ENST00000515339	ALDH1L2	Q3SY69	923 aa		27.86	■■■□□ 2.05
PACRGL-233	ENST00000515339	TTLL5	Q6EMB2	1281 aa		27.86	■■■□□ 2.05
PACRGL-233	ENST00000515339	SULF1	Q8IWU6	871 aa		27.86	■■■□□ 2.05
PACRGL-233	ENST00000515339	SMC4	Q9NTJ3	1288 aa		27.86	■■■□□ 2.05
PACRGL-233	ENST00000515339	AOC2	O75106	756 aa		27.85	■■■□□ 2.05
PACRGL-233	ENST00000515339	GTF2I	P78347	998 aa		27.85	■■■□□ 2.05
PACRGL-233	ENST00000515339	MAP2K1	Q02750	393 aa	Predicted RBP	27.85	■■■□□ 2.05
PACRGL-233	ENST00000515339	TNS4	Q8IZW8	715 aa		27.85	■■■□□ 2.05
PACRGL-233	ENST00000515339	BICC1	Q9H694	974 aa	Known RBP	27.85	■■■□□ 2.05
PACRGL-233	ENST00000515339	CD209	Q9NNX6	404 aa		27.85	■■■□□ 2.05
PACRGL-233	ENST00000515339	MYO3B	Q8WXR4	1341 aa		27.85	■■■□□ 2.05
PACRGL-233	ENST00000515339	CTCF	P49711	727 aa	Predicted RBP	27.84	■■■□□ 2.05
PACRGL-233	ENST00000515339	HUNK	P57058	714 aa		27.84	■■■□□ 2.05
PACRGL-233	ENST00000515339	HHIPL1	Q96JK4	782 aa		27.84	■■■□□ 2.05
PACRGL-233	ENST00000515339	C15orf52	Q6ZUT6	534 aa	Known RBP	27.83	■■■□□ 2.05
PACRGL-233	ENST00000515339	OGFOD1	Q8N543	542 aa		27.83	■■■□□ 2.05
PACRGL-233	ENST00000515339	PUS3	Q9BZE2	481 aa	Known RBP	27.83	■■■□□ 2.05
PACRGL-233	ENST00000515339	SCAF8	Q9UPN6	1271 aa	Known RBP	27.83	■■■□□ 2.05
PACRGL-233	ENST00000515339	NBPF9	Q3BBW0	867 aa		27.82	■■■□□ 2.04
PACRGL-233	ENST00000515339	KIAA0825	Q8IV33	1275 aa		27.82	■■■□□ 2.04
PACRGL-233	ENST00000515339	ANKRD44	Q8N8A2	993 aa		27.82	■■■□□ 2.04
PACRGL-233	ENST00000515339	CDCA5	Q96FF9	252 aa		27.82	■■■□□ 2.04
PACRGL-233	ENST00000515339	GBA2	Q9HCG7	927 aa	Predicted RBP	27.82	■■■□□ 2.04
PACRGL-233	ENST00000515339	ZNF804A	Q7Z570	1209 aa		27.81	■■■□□ 2.04
PACRGL-233	ENST00000515339	LBX1	P52954	281 aa		27.8	■■■□□ 2.04
PACRGL-233	ENST00000515339	RABL6	Q3YEC7	729 aa	Predicted RBP	27.8	■■■□□ 2.04
PACRGL-233	ENST00000515339	C2orf69	Q8N8R5	385 aa		27.8	■■■□□ 2.04
PACRGL-233	ENST00000515339	USP44	Q9H0E7	712 aa		27.8	■■■□□ 2.04
PACRGL-233	ENST00000515339	PITPNM2	Q9BZ72	1349 aa		27.79	■■■□□ 2.04
PACRGL-233	ENST00000515339	MAP2K2	P36507	400 aa		27.79	■■■□□ 2.04
PACRGL-233	ENST00000515339	WNT10B	O00744	389 aa		27.78	■■■□□ 2.04
PACRGL-233	ENST00000515339	SASH1	O94885	1247 aa		27.78	■■■□□ 2.04
PACRGL-233	ENST00000515339	HSPA8	P11142	646 aa	Known RBP	27.78	■■■□□ 2.04
PACRGL-233	ENST00000515339	PRDM10	Q9NQV6	1147 aa		27.78	■■■□□ 2.04
PACRGL-233	ENST00000515339	CT47B1	P0C2W7	299 aa	Predicted RBP	27.77	■■■□□ 2.04
PACRGL-233	ENST00000515339	IL1R1	P14778	569 aa		27.77	■■■□□ 2.04
PACRGL-233	ENST00000515339	CERS5	Q8N5B7	392 aa		27.77	■■■□□ 2.04
PACRGL-233	ENST00000515339	JAG2	Q9Y219	1238 aa		27.77	■■■□□ 2.04
PACRGL-233	ENST00000515339	BEGAIN	Q9BUH8	593 aa		27.76	■■■□□ 2.03
PACRGL-233	ENST00000515339	NOB1	Q9ULX3	412 aa	Known RBP	27.76	■■■□□ 2.03
PACRGL-233	ENST00000515339	RIPOR2	Q9Y4F9	1068 aa		27.76	■■■□□ 2.03
PACRGL-233	ENST00000515339	LRRC24	Q50LG9	513 aa		27.75	■■■□□ 2.03
PACRGL-233	ENST00000515339	RGMB	Q6NW40	437 aa		27.75	■■■□□ 2.03
PACRGL-233	ENST00000515339	ZIC5	Q96T25	663 aa		27.75	■■■□□ 2.03
PACRGL-233	ENST00000515339	HDAC9	Q9UKV0	1011 aa		27.75	■■■□□ 2.03
PACRGL-233	ENST00000515339	UBE4A	Q14139	1066 aa		27.74	■■■□□ 2.03
PACRGL-233	ENST00000515339	PRAMEF18	Q5VWM3	479 aa		27.74	■■■□□ 2.03
PACRGL-233	ENST00000515339	KLHDC4	Q8TBB5	520 aa		27.74	■■■□□ 2.03
PACRGL-233	ENST00000515339	MROH5	Q6ZUA9	1318 aa		27.73	■■■□□ 2.03
PACRGL-233	ENST00000515339	GYG1	P46976	350 aa		27.73	■■■□□ 2.03
PACRGL-233	ENST00000515339	MMP14	P50281	582 aa		27.73	■■■□□ 2.03
PACRGL-233	ENST00000515339	FAM155A	B1AL88	458 aa	Predicted RBP	27.72	■■■□□ 2.03
PACRGL-233	ENST00000515339		F8W031	263 aa	Predicted RBP	27.72	■■■□□ 2.03

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