RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 WTIPA6NIX2 430 aaPredicted RBP25.8■■□□□ 1.72
LSM6-207ENST00000515311 SNAP23O00161 211 aa25.8■■□□□ 1.72
LSM6-207ENST00000515311 AACSQ86V21 672 aa25.8■■□□□ 1.72
LSM6-207ENST00000515311 EYA3Q99504 573 aa25.8■■□□□ 1.72
LSM6-207ENST00000515311 TAOK3Q9H2K8 898 aa25.8■■□□□ 1.72
LSM6-207ENST00000515311 NFKBIEO00221 500 aa25.79■■□□□ 1.72
LSM6-207ENST00000515311 TIMM10P62072 90 aa25.79■■□□□ 1.72
LSM6-207ENST00000515311 VPS33BQ9H267 617 aa25.79■■□□□ 1.72
LSM6-207ENST00000515311 PELP1Q8IZL8 1130 aaKnown RBP25.78■■□□□ 1.72
LSM6-207ENST00000515311 NEUROD6Q96NK8 337 aa25.78■■□□□ 1.72
LSM6-207ENST00000515311 LNPKQ9C0E8 428 aa25.78■■□□□ 1.72
LSM6-207ENST00000515311 IFIT2P09913 472 aaKnown RBP25.77■■□□□ 1.72
LSM6-207ENST00000515311 GPR162Q16538 588 aa25.77■■□□□ 1.72
LSM6-207ENST00000515311 WASHC4Q2M389 1173 aa25.77■■□□□ 1.72
LSM6-207ENST00000515311 XAGE2Q96GT9 111 aa25.77■■□□□ 1.72
LSM6-207ENST00000515311 DBNLQ9UJU6 430 aaKnown RBP25.77■■□□□ 1.72
LSM6-207ENST00000515311 KLRK1P26718 216 aa25.76■■□□□ 1.71
LSM6-207ENST00000515311 ZC3H12CQ9C0D7 883 aaKnown RBP25.76■■□□□ 1.71
LSM6-207ENST00000515311 GRIN3BO60391 1043 aa25.75■■□□□ 1.71
LSM6-207ENST00000515311 KIAA2012Q0VF49 1180 aa25.75■■□□□ 1.71
LSM6-207ENST00000515311 CAVIN4Q5BKX8 364 aa25.75■■□□□ 1.71
LSM6-207ENST00000515311 ARHGAP27Q6ZUM4 889 aa25.75■■□□□ 1.71
LSM6-207ENST00000515311 GPR101Q96P66 508 aaPredicted RBP25.75■■□□□ 1.71
LSM6-207ENST00000515311 CCDC8Q9H0W5 538 aaPredicted RBP25.75■■□□□ 1.71
LSM6-207ENST00000515311 SBF1O95248 1867 aa25.74■■□□□ 1.71
LSM6-207ENST00000515311 ADORA1P30542 326 aa25.74■■□□□ 1.71
LSM6-207ENST00000515311 TXNRD3Q86VQ6 643 aa25.74■■□□□ 1.71
LSM6-207ENST00000515311 DBNDD2Q9BQY9 259 aa25.74■■□□□ 1.71
LSM6-207ENST00000515311 TLR7Q9NYK1 1049 aaKnown RBP25.74■■□□□ 1.71
LSM6-207ENST00000515311 CCDC88AQ3V6T2 1871 aa25.74■■□□□ 1.71
LSM6-207ENST00000515311 GORABQ5T7V8 394 aa25.73■■□□□ 1.71
LSM6-207ENST00000515311 ZNF804AQ7Z570 1209 aa25.73■■□□□ 1.71
LSM6-207ENST00000515311 FBXO33Q7Z6M2 555 aa25.73■■□□□ 1.71
LSM6-207ENST00000515311 PIAS4Q8N2W9 510 aaPredicted RBP25.73■■□□□ 1.71
LSM6-207ENST00000515311 FAM84BQ96KN1 310 aaPredicted RBP25.73■■□□□ 1.71
LSM6-207ENST00000515311 BCL11AQ9H165 835 aa25.73■■□□□ 1.71
LSM6-207ENST00000515311 ZNF277Q9NRM2 450 aaPredicted RBP25.73■■□□□ 1.71
LSM6-207ENST00000515311 DICER1Q9UPY3 1922 aaKnown RBP25.73■■□□□ 1.71
LSM6-207ENST00000515311 SALL3Q9BXA9 1300 aa25.72■■□□□ 1.71
LSM6-207ENST00000515311 PPIP5K2O43314 1243 aa25.72■■□□□ 1.71
LSM6-207ENST00000515311 HIBADHP31937 336 aaKnown RBP25.72■■□□□ 1.71
LSM6-207ENST00000515311 IARSP41252 1262 aaKnown RBP25.72■■□□□ 1.71
LSM6-207ENST00000515311 C16orf71Q8IYS4 520 aaPredicted RBP25.72■■□□□ 1.71
LSM6-207ENST00000515311 MYH13Q9UKX3 1938 aa25.72■■□□□ 1.71
LSM6-207ENST00000515311 RIMBP2O15034 1052 aa25.71■■□□□ 1.71
LSM6-207ENST00000515311 ZBTB22O15209 634 aa25.71■■□□□ 1.71
LSM6-207ENST00000515311 GYG1P46976 350 aa25.71■■□□□ 1.71
LSM6-207ENST00000515311 RASSF7Q02833 373 aa25.71■■□□□ 1.71
LSM6-207ENST00000515311 AOC3Q16853 763 aa25.71■■□□□ 1.71
LSM6-207ENST00000515311 GPATCH3Q96I76 525 aa25.71■■□□□ 1.71
LSM6-207ENST00000515311 BCAMP50895 628 aa25.7■■□□□ 1.7
LSM6-207ENST00000515311 CCDC158Q5M9N0 1113 aa25.7■■□□□ 1.7
LSM6-207ENST00000515311 CCDC102BQ68D86 513 aa25.7■■□□□ 1.7
LSM6-207ENST00000515311 VPS37DQ86XT2 251 aa25.7■■□□□ 1.7
LSM6-207ENST00000515311 ZNF512BQ96KM6 892 aaPredicted RBP25.7■■□□□ 1.7
LSM6-207ENST00000515311 COA1Q9GZY4 146 aa25.7■■□□□ 1.7
LSM6-207ENST00000515311 TTC41PQ6P2S7 1318 aa25.69■■□□□ 1.7
LSM6-207ENST00000515311 COL4A5P29400 1685 aa25.69■■□□□ 1.7
LSM6-207ENST00000515311 MX1P20591 662 aa25.69■■□□□ 1.7
LSM6-207ENST00000515311 LMNB1P20700 586 aa25.69■■□□□ 1.7
LSM6-207ENST00000515311 PHKA1P46020 1223 aa25.69■■□□□ 1.7
LSM6-207ENST00000515311 LARGE2Q8N3Y3 721 aa25.69■■□□□ 1.7
LSM6-207ENST00000515311 OTUD7AQ8TE49 926 aaPredicted RBP25.69■■□□□ 1.7
LSM6-207ENST00000515311 GNL3LQ9NVN8 582 aaKnown RBP25.69■■□□□ 1.7
LSM6-207ENST00000515311 STAP2Q9UGK3 403 aa25.69■■□□□ 1.7
LSM6-207ENST00000515311 UQCRFS1P1P0C7P4 283 aa25.68■■□□□ 1.7
LSM6-207ENST00000515311 PDE4AP27815 886 aa25.68■■□□□ 1.7
LSM6-207ENST00000515311 ECHDC1Q9NTX5 307 aa25.68■■□□□ 1.7
LSM6-207ENST00000515311 CHD4Q14839 1912 aa25.68■■□□□ 1.7
LSM6-207ENST00000515311 SEMA3EO15041 775 aa25.67■■□□□ 1.7
LSM6-207ENST00000515311 IL1R1P14778 569 aa25.67■■□□□ 1.7
LSM6-207ENST00000515311 ARID4AP29374 1257 aaPredicted RBP25.67■■□□□ 1.7
LSM6-207ENST00000515311 PRELPP51888 382 aa25.67■■□□□ 1.7
LSM6-207ENST00000515311 TTC39AQ5SRH9 613 aa25.67■■□□□ 1.7
LSM6-207ENST00000515311 CD209Q9NNX6 404 aa25.67■■□□□ 1.7
LSM6-207ENST00000515311 PSME4Q14997 1843 aa25.67■■□□□ 1.7
LSM6-207ENST00000515311 AKAP11Q9UKA4 1901 aa25.67■■□□□ 1.7
LSM6-207ENST00000515311 AOX1Q06278 1338 aa25.66■■□□□ 1.7
LSM6-207ENST00000515311 G3V3G9 751 aa25.66■■□□□ 1.7
LSM6-207ENST00000515311 PDE1AP54750 535 aa25.66■■□□□ 1.7
LSM6-207ENST00000515311 DCAF8Q5TAQ9 597 aa25.66■■□□□ 1.7
LSM6-207ENST00000515311 PODNQ7Z5L7 613 aa25.66■■□□□ 1.7
LSM6-207ENST00000515311 PLEKHM2Q8IWE5 1019 aa25.66■■□□□ 1.7
LSM6-207ENST00000515311 TDRD7Q8NHU6 1098 aaKnown RBP25.66■■□□□ 1.7
LSM6-207ENST00000515311 DCAF8L1A6NGE4 600 aa25.65■■□□□ 1.7
LSM6-207ENST00000515311 ATP5JP18859 108 aa25.65■■□□□ 1.7
LSM6-207ENST00000515311 DOK7Q18PE1 504 aa25.65■■□□□ 1.7
LSM6-207ENST00000515311 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.65■■□□□ 1.7
LSM6-207ENST00000515311 OSBPL3Q9H4L5 887 aa25.65■■□□□ 1.7
LSM6-207ENST00000515311 TIAM2Q8IVF5 1701 aa25.65■■□□□ 1.7
LSM6-207ENST00000515311 ECE2O60344 883 aa25.64■■□□□ 1.7
LSM6-207ENST00000515311 NIM1KQ8IY84 436 aa25.64■■□□□ 1.7
LSM6-207ENST00000515311 JDP2Q8WYK2 163 aa25.64■■□□□ 1.7
LSM6-207ENST00000515311 DBNDD1Q9H9R9 158 aa25.64■■□□□ 1.7
LSM6-207ENST00000515311 SCN9AQ15858 1988 aa25.64■■□□□ 1.69
LSM6-207ENST00000515311 PDS5AQ29RF7 1337 aaKnown RBP25.63■■□□□ 1.69
LSM6-207ENST00000515311 ZNF646O15015 1829 aaPredicted RBP25.63■■□□□ 1.69
LSM6-207ENST00000515311 ERC2O15083 957 aa25.63■■□□□ 1.69
LSM6-207ENST00000515311 ZNRF3Q9ULT6 936 aa25.63■■□□□ 1.69
LSM6-207ENST00000515311 GLRX3O76003 335 aaKnown RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms