RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 CITED4Q96RK1 184 aa6.37□□□□□ -1.39
CAST-242ENST00000515063 LACRTQ9GZZ8 138 aa6.37□□□□□ -1.39
CAST-242ENST00000515063 MRPL18Q9H0U6 180 aaKnown RBP6.37□□□□□ -1.39
CAST-242ENST00000515063 A6NHS1 94 aa6.36□□□□□ -1.39
CAST-242ENST00000515063 DLL1O00548 723 aa6.36□□□□□ -1.39
CAST-242ENST00000515063 ADAM23O75077 832 aa6.36□□□□□ -1.39
CAST-242ENST00000515063 DEAF1O75398 565 aaPredicted RBP6.36□□□□□ -1.39
CAST-242ENST00000515063 SUZ12Q15022 739 aaKnown RBP6.36□□□□□ -1.39
CAST-242ENST00000515063 SHISA2Q6UWI4 295 aa6.36□□□□□ -1.39
CAST-242ENST00000515063 CCDC87Q9NVE4 849 aa6.36□□□□□ -1.39
CAST-242ENST00000515063 AMOTL2Q9Y2J4 779 aa6.36□□□□□ -1.39
CAST-242ENST00000515063 PDE2AO00408 941 aaPredicted RBP6.35□□□□□ -1.39
CAST-242ENST00000515063 FURINP09958 794 aa6.35□□□□□ -1.39
CAST-242ENST00000515063 DOC2BQ14184 412 aa6.35□□□□□ -1.39
CAST-242ENST00000515063 KLHL23Q8NBE8 558 aa6.35□□□□□ -1.39
CAST-242ENST00000515063 WNT8BQ93098 351 aa6.35□□□□□ -1.39
CAST-242ENST00000515063 CHRDQ9H2X0 955 aa6.35□□□□□ -1.39
CAST-242ENST00000515063 DZANK1Q9NVP4 752 aa6.35□□□□□ -1.39
CAST-242ENST00000515063 EIF4EBP3O60516 100 aaPredicted RBP6.34□□□□□ -1.39
CAST-242ENST00000515063 SETDB1Q15047 1291 aa6.34□□□□□ -1.39
CAST-242ENST00000515063 TMEM102Q8N9M5 508 aaPredicted RBP6.34□□□□□ -1.39
CAST-242ENST00000515063 POP1Q99575 1024 aaKnown RBP6.34□□□□□ -1.39
CAST-242ENST00000515063 ADAM19Q9H013 955 aa6.34□□□□□ -1.39
CAST-242ENST00000515063 TPSG1Q9NRR2 321 aa6.34□□□□□ -1.39
CAST-242ENST00000515063 GNEQ9Y223 722 aaKnown RBP6.34□□□□□ -1.39
CAST-242ENST00000515063 PATL2C9JE40 543 aaKnown RBP6.33□□□□□ -1.4
CAST-242ENST00000515063 H3BRJ5 948 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 LINC01387J3KSC0 135 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 EREGO14944 169 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 ARL4DP49703 201 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 PIP4K2BP78356 416 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 ARHGAP4P98171 946 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 TMEM130Q8N3G9 435 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 TMC1Q8TDI8 760 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 WFDC12Q8WWY7 111 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 OSMRQ99650 979 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 AKTIPQ9H8T0 292 aa6.33□□□□□ -1.4
CAST-242ENST00000515063 FOXD3Q9UJU5 478 aaPredicted RBP6.33□□□□□ -1.4
CAST-242ENST00000515063 H2AFB1P0C5Y9 115 aa6.32□□□□□ -1.4
CAST-242ENST00000515063 H2AFB2P0C5Z0 115 aa6.32□□□□□ -1.4
CAST-242ENST00000515063 CD68P34810 354 aaPredicted RBP6.32□□□□□ -1.4
CAST-242ENST00000515063 ZFYVE28Q9HCC9 887 aa6.32□□□□□ -1.4
CAST-242ENST00000515063 OSGEPQ9NPF4 335 aa6.32□□□□□ -1.4
CAST-242ENST00000515063 SEC31BQ9NQW1 1179 aa6.32□□□□□ -1.4
CAST-242ENST00000515063 SOWAHDA6NJG2 315 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 FSCN2O14926 492 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 EPHA1P21709 976 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 RSPO4Q2I0M5 234 aaPredicted RBP6.31□□□□□ -1.4
CAST-242ENST00000515063 BSNDQ8WZ55 320 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 TP53INP1Q96A56 240 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 DMRTB1Q96MA1 342 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 FAM129BQ96TA1 746 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 ZKSCAN3Q9BRR0 538 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 CEP41Q9BYV8 373 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 SEMA6BQ9H3T3 888 aa6.31□□□□□ -1.4
CAST-242ENST00000515063 SH2B1Q9NRF2 756 aaPredicted RBP6.31□□□□□ -1.4
CAST-242ENST00000515063 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
CAST-242ENST00000515063 NFKBIEO00221 500 aa6.3□□□□□ -1.4
CAST-242ENST00000515063 NOS3P29474 1203 aa6.3□□□□□ -1.4
CAST-242ENST00000515063 CDC25BP30305 580 aa6.3□□□□□ -1.4
CAST-242ENST00000515063 IREB2P48200 963 aaKnown RBP6.3□□□□□ -1.4
CAST-242ENST00000515063 NKAPLQ5M9Q1 402 aa6.3□□□□□ -1.4
CAST-242ENST00000515063 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
CAST-242ENST00000515063 NXPE3Q969Y0 559 aa6.3□□□□□ -1.4
CAST-242ENST00000515063 BHLHE41Q9C0J9 482 aaPredicted RBP6.3□□□□□ -1.4
CAST-242ENST00000515063 DNAJC25Q9H1X3 360 aa6.3□□□□□ -1.4
CAST-242ENST00000515063 BIN2Q9UBW5 565 aaPredicted RBP6.3□□□□□ -1.4
CAST-242ENST00000515063 DYRK3O43781 588 aa6.29□□□□□ -1.4
CAST-242ENST00000515063 CPNE3O75131 537 aaKnown RBP6.29□□□□□ -1.4
CAST-242ENST00000515063 ACPPP15309 386 aa6.29□□□□□ -1.4
CAST-242ENST00000515063 KCNA1Q09470 495 aa6.29□□□□□ -1.4
CAST-242ENST00000515063 ECM1Q16610 540 aa6.29□□□□□ -1.4
CAST-242ENST00000515063 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.29□□□□□ -1.4
CAST-242ENST00000515063 GALNT12Q8IXK2 581 aa6.29□□□□□ -1.4
CAST-242ENST00000515063 CARD10Q9BWT7 1032 aa6.29□□□□□ -1.4
CAST-242ENST00000515063 RBCK1Q9BYM8 510 aa6.29□□□□□ -1.4
CAST-242ENST00000515063 SOX13Q9UN79 622 aa6.29□□□□□ -1.4
CAST-242ENST00000515063 C19orf57Q0VDD7 668 aa6.28□□□□□ -1.4
CAST-242ENST00000515063 IKBKEQ14164 716 aa6.28□□□□□ -1.4
CAST-242ENST00000515063 DUOXA2Q1HG44 320 aa6.28□□□□□ -1.4
CAST-242ENST00000515063 ACAD11Q709F0 780 aa6.28□□□□□ -1.4
CAST-242ENST00000515063 GALNT11Q8NCW6 608 aa6.28□□□□□ -1.4
CAST-242ENST00000515063 ASAP3Q8TDY4 903 aa6.28□□□□□ -1.4
CAST-242ENST00000515063 SSBP4Q9BWG4 385 aaPredicted RBP6.28□□□□□ -1.4
CAST-242ENST00000515063 DCTN4Q9UJW0 460 aa6.28□□□□□ -1.4
CAST-242ENST00000515063 GLB1P16278 677 aa6.27□□□□□ -1.41
CAST-242ENST00000515063 FOXD4L6Q3SYB3 417 aaPredicted RBP6.27□□□□□ -1.41
CAST-242ENST00000515063 FOXD4L3Q6VB84 417 aaPredicted RBP6.27□□□□□ -1.41
CAST-242ENST00000515063 Q6ZS46 218 aa6.27□□□□□ -1.41
CAST-242ENST00000515063 DZIP1LQ8IYY4 767 aaKnown RBP6.27□□□□□ -1.41
CAST-242ENST00000515063 SLC7A3Q8WY07 619 aa6.27□□□□□ -1.41
CAST-242ENST00000515063 ALKBH8Q96BT7 664 aaKnown RBP6.27□□□□□ -1.41
CAST-242ENST00000515063 SOX17Q9H6I2 414 aaPredicted RBP6.27□□□□□ -1.41
CAST-242ENST00000515063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.27□□□□□ -1.41
CAST-242ENST00000515063 TRPA1O75762 1119 aa6.26□□□□□ -1.41
CAST-242ENST00000515063 POLR3DP05423 398 aaPredicted RBP6.26□□□□□ -1.41
CAST-242ENST00000515063 UVSSAQ2YD98 709 aa6.26□□□□□ -1.41
CAST-242ENST00000515063 PEAR1Q5VY43 1037 aaPredicted RBP6.26□□□□□ -1.41
CAST-242ENST00000515063 DDX54Q8TDD1 881 aaKnown RBP6.26□□□□□ -1.41
CAST-242ENST00000515063 MEGF10Q96KG7 1140 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms