RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 PDE4DIPQ5VU43 2346 aa29.39■■■□□ 2.3
SMAD1-214ENST00000514831 PI4KAP2A4QPH2 592 aa29.39■■■□□ 2.3
SMAD1-214ENST00000514831 WTIPA6NIX2 430 aaPredicted RBP29.39■■■□□ 2.3
SMAD1-214ENST00000514831 DACT2Q5SW24 774 aa29.39■■■□□ 2.3
SMAD1-214ENST00000514831 TSPYL6Q8N831 410 aa29.39■■■□□ 2.3
SMAD1-214ENST00000514831 PI4KAP1Q8N8J0 262 aa29.39■■■□□ 2.3
SMAD1-214ENST00000514831 MYO3BQ8WXR4 1341 aa29.39■■■□□ 2.3
SMAD1-214ENST00000514831 CCT4P50991 539 aaKnown RBP29.38■■■□□ 2.29
SMAD1-214ENST00000514831 NEXNQ0ZGT2 675 aa29.37■■■□□ 2.29
SMAD1-214ENST00000514831 NBPF9Q3BBW0 867 aa29.37■■■□□ 2.29
SMAD1-214ENST00000514831 SCAF8Q9UPN6 1271 aaKnown RBP29.37■■■□□ 2.29
SMAD1-214ENST00000514831 STRIP1Q5VSL9 837 aa29.36■■■□□ 2.29
SMAD1-214ENST00000514831 MOB2Q70IA6 237 aa29.36■■■□□ 2.29
SMAD1-214ENST00000514831 OGFOD1Q8N543 542 aa29.36■■■□□ 2.29
SMAD1-214ENST00000514831 COA1Q9GZY4 146 aa29.36■■■□□ 2.29
SMAD1-214ENST00000514831 TNRC18O15417 2968 aaPredicted RBP29.36■■■□□ 2.29
SMAD1-214ENST00000514831 NEURL1BA8MQ27 555 aa29.35■■■□□ 2.29
SMAD1-214ENST00000514831 SOX10P56693 466 aa29.35■■■□□ 2.29
SMAD1-214ENST00000514831 STK31Q9BXU1 1019 aa29.35■■■□□ 2.29
SMAD1-214ENST00000514831 WNT10BO00744 389 aa29.34■■■□□ 2.29
SMAD1-214ENST00000514831 CWF19L2Q2TBE0 894 aaKnown RBP29.34■■■□□ 2.29
SMAD1-214ENST00000514831 MXD3Q9BW11 206 aa29.34■■■□□ 2.29
SMAD1-214ENST00000514831 UBE2Q2LH0YL09 131 aa29.33■■■□□ 2.29
SMAD1-214ENST00000514831 MMP14P50281 582 aa29.33■■■□□ 2.29
SMAD1-214ENST00000514831 LEMD3Q9Y2U8 911 aa29.33■■■□□ 2.29
SMAD1-214ENST00000514831 PRAMEF18Q5VWM3 479 aa29.32■■■□□ 2.28
SMAD1-214ENST00000514831 TSR2Q969E8 191 aaKnown RBP29.32■■■□□ 2.28
SMAD1-214ENST00000514831 FBXW7Q969H0 707 aa29.32■■■□□ 2.28
SMAD1-214ENST00000514831 H7C1W4 665 aa29.31■■■□□ 2.28
SMAD1-214ENST00000514831 NF2P35240 595 aa29.31■■■□□ 2.28
SMAD1-214ENST00000514831 IGHMBP2P38935 993 aaKnown RBP29.31■■■□□ 2.28
SMAD1-214ENST00000514831 UBE3BQ7Z3V4 1068 aa29.31■■■□□ 2.28
SMAD1-214ENST00000514831 TXNRD3Q86VQ6 643 aa29.31■■■□□ 2.28
SMAD1-214ENST00000514831 TTLL12Q14166 644 aaPredicted RBP29.3■■■□□ 2.28
SMAD1-214ENST00000514831 PLA2G12BQ9BX93 195 aa29.3■■■□□ 2.28
SMAD1-214ENST00000514831 A0A1B0GUL6 1792 aa29.3■■■□□ 2.28
SMAD1-214ENST00000514831 CACNA1FO60840 1977 aa29.3■■■□□ 2.28
SMAD1-214ENST00000514831 SASH1O94885 1247 aa29.29■■■□□ 2.28
SMAD1-214ENST00000514831 PKN2Q16513 984 aaKnown RBP29.29■■■□□ 2.28
SMAD1-214ENST00000514831 ECM29Q5VYK3 1845 aa29.29■■■□□ 2.28
SMAD1-214ENST00000514831 ZNF804BA4D1E1 1349 aa29.28■■■□□ 2.28
SMAD1-214ENST00000514831 TM4SF4P48230 202 aa29.28■■■□□ 2.28
SMAD1-214ENST00000514831 TWISTNBQ3B726 338 aaPredicted RBP29.28■■■□□ 2.28
SMAD1-214ENST00000514831 G2E3Q7L622 706 aa29.28■■■□□ 2.28
SMAD1-214ENST00000514831 ZNF296Q8WUU4 475 aaPredicted RBP29.28■■■□□ 2.28
SMAD1-214ENST00000514831 ANKRD2Q9GZV1 360 aa29.28■■■□□ 2.28
SMAD1-214ENST00000514831 HPS5Q9UPZ3 1129 aa29.28■■■□□ 2.28
SMAD1-214ENST00000514831 COL1A1P02452 1464 aaPredicted RBP29.28■■■□□ 2.28
SMAD1-214ENST00000514831 ITGA6P23229 1130 aa29.27■■■□□ 2.28
SMAD1-214ENST00000514831 NOM1Q5C9Z4 860 aaKnown RBP29.27■■■□□ 2.28
SMAD1-214ENST00000514831 APOBEC3FQ8IUX4 373 aaKnown RBP29.27■■■□□ 2.28
SMAD1-214ENST00000514831 LAMB1P07942 1786 aa29.26■■■□□ 2.28
SMAD1-214ENST00000514831 TBC1D8O95759 1140 aa29.26■■■□□ 2.27
SMAD1-214ENST00000514831 KLRK1P26718 216 aa29.26■■■□□ 2.27
SMAD1-214ENST00000514831 GCKRQ14397 625 aa29.26■■■□□ 2.27
SMAD1-214ENST00000514831 CCDC27Q2M243 656 aa29.26■■■□□ 2.27
SMAD1-214ENST00000514831 TTLL5Q6EMB2 1281 aa29.26■■■□□ 2.27
SMAD1-214ENST00000514831 HDAC9Q9UKV0 1011 aa29.26■■■□□ 2.27
SMAD1-214ENST00000514831 ZBED3Q96IU2 234 aaPredicted RBP29.25■■■□□ 2.27
SMAD1-214ENST00000514831 SLC4A2P04920 1241 aa29.24■■■□□ 2.27
SMAD1-214ENST00000514831 CASP7P55210 303 aa29.24■■■□□ 2.27
SMAD1-214ENST00000514831 SREBF2Q12772 1141 aa29.24■■■□□ 2.27
SMAD1-214ENST00000514831 ARMC9Q7Z3E5 817 aa29.24■■■□□ 2.27
SMAD1-214ENST00000514831 KIAA0825Q8IV33 1275 aa29.24■■■□□ 2.27
SMAD1-214ENST00000514831 MPHOSPH8Q99549 860 aa29.24■■■□□ 2.27
SMAD1-214ENST00000514831 CSF1RP07333 972 aa29.23■■■□□ 2.27
SMAD1-214ENST00000514831 CFHR5Q9BXR6 569 aa29.23■■■□□ 2.27
SMAD1-214ENST00000514831 MYH16Q9H6N6 1097 aa29.23■■■□□ 2.27
SMAD1-214ENST00000514831 GPR25O00155 361 aa29.22■■■□□ 2.27
SMAD1-214ENST00000514831 GTF2IP78347 998 aa29.22■■■□□ 2.27
SMAD1-214ENST00000514831 PTPN12Q05209 780 aaKnown RBP29.22■■■□□ 2.27
SMAD1-214ENST00000514831 FLIIQ13045 1269 aa29.22■■■□□ 2.27
SMAD1-214ENST00000514831 WWC1Q8IX03 1113 aa29.22■■■□□ 2.27
SMAD1-214ENST00000514831 MKRN3Q13064 507 aaKnown RBP29.21■■■□□ 2.27
SMAD1-214ENST00000514831 IL16Q14005 1332 aa29.2■■■□□ 2.27
SMAD1-214ENST00000514831 KCNJ4P48050 445 aa29.2■■■□□ 2.26
SMAD1-214ENST00000514831 CHRNDQ07001 517 aa29.2■■■□□ 2.26
SMAD1-214ENST00000514831 LDLRAD1Q5T700 205 aa29.2■■■□□ 2.26
SMAD1-214ENST00000514831 DNAAF4Q8WXU2 420 aa29.2■■■□□ 2.26
SMAD1-214ENST00000514831 IRS2Q9Y4H2 1338 aa29.2■■■□□ 2.26
SMAD1-214ENST00000514831 LINS1Q8NG48 757 aa29.19■■■□□ 2.26
SMAD1-214ENST00000514831 CD209Q9NNX6 404 aa29.19■■■□□ 2.26
SMAD1-214ENST00000514831 FKBP5Q13451 457 aaPredicted RBP29.18■■■□□ 2.26
SMAD1-214ENST00000514831 PRKG1Q13976 671 aa29.18■■■□□ 2.26
SMAD1-214ENST00000514831 SPRYD7Q5W111 196 aa29.17■■■□□ 2.26
SMAD1-214ENST00000514831 FBXO46Q6PJ61 603 aaPredicted RBP29.17■■■□□ 2.26
SMAD1-214ENST00000514831 C15orf52Q6ZUT6 534 aaKnown RBP29.17■■■□□ 2.26
SMAD1-214ENST00000514831 PCDH10Q9P2E7 1040 aa29.17■■■□□ 2.26
SMAD1-214ENST00000514831 ANGEL1Q9UNK9 670 aaKnown RBP29.17■■■□□ 2.26
SMAD1-214ENST00000514831 SSC5DA1L4H1 1573 aa29.17■■■□□ 2.26
SMAD1-214ENST00000514831 ANKRD18BA2A2Z9 1011 aa29.16■■■□□ 2.26
SMAD1-214ENST00000514831 PRPF38BQ5VTL8 546 aaKnown RBP29.16■■■□□ 2.26
SMAD1-214ENST00000514831 MTMR14Q8NCE2 650 aa29.16■■■□□ 2.26
SMAD1-214ENST00000514831 FKTNO75072 461 aa29.15■■■□□ 2.26
SMAD1-214ENST00000514831 DLGAP5Q15398 846 aa29.15■■■□□ 2.26
SMAD1-214ENST00000514831 MAP3K11Q16584 847 aa29.15■■■□□ 2.26
SMAD1-214ENST00000514831 CERS5Q8N5B7 392 aa29.15■■■□□ 2.26
SMAD1-214ENST00000514831 DEFB129Q9H1M3 183 aa29.15■■■□□ 2.26
SMAD1-214ENST00000514831 PPP2R3BQ9Y5P8 575 aa29.15■■■□□ 2.26
SMAD1-214ENST00000514831 NCBP3Q53F19 620 aaKnown RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms