RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ITGA6P23229 1130 aa8.86□□□□□ -0.99
SMAD1-213ENST00000514778 IGHMBP2P38935 993 aaKnown RBP8.86□□□□□ -0.99
SMAD1-213ENST00000514778 SUPT20HQ8NEM7 779 aa8.86□□□□□ -0.99
SMAD1-213ENST00000514778 PANK1Q8TE04 598 aa8.86□□□□□ -0.99
SMAD1-213ENST00000514778 JARID2Q92833 1246 aaPredicted RBP8.86□□□□□ -0.99
SMAD1-213ENST00000514778 PSMD1Q99460 953 aa8.86□□□□□ -0.99
SMAD1-213ENST00000514778 KRTAP3-3Q9BYR6 98 aa8.86□□□□□ -0.99
SMAD1-213ENST00000514778 KRTAP3-2Q9BYR7 98 aa8.86□□□□□ -0.99
SMAD1-213ENST00000514778 BICC1Q9H694 974 aaKnown RBP8.86□□□□□ -0.99
SMAD1-213ENST00000514778 ARFGEF1Q9Y6D6 1849 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 C2orf72A6NCS6 295 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 FAM161AQ3B820 660 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 EPHA10Q5JZY3 1008 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 RPAP2Q8IXW5 612 aaPredicted RBP8.85□□□□□ -0.99
SMAD1-213ENST00000514778 ANKRD44Q8N8A2 993 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 CELF1Q92879 486 aaKnown RBP8.85□□□□□ -0.99
SMAD1-213ENST00000514778 MPHOSPH8Q99549 860 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 RTFDC1Q9BY42 306 aaPredicted RBP8.85□□□□□ -0.99
SMAD1-213ENST00000514778 ANKRD2Q9GZV1 360 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 ZBTB40Q9NUA8 1239 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 PODXL2Q9NZ53 605 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 TNNQ9UQP3 1299 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 SNED1Q8TER0 1413 aa8.85□□□□□ -0.99
SMAD1-213ENST00000514778 C21orf2O43822 256 aa8.84□□□□□ -0.99
SMAD1-213ENST00000514778 PLIN1O60240 522 aa8.84□□□□□ -0.99
SMAD1-213ENST00000514778 FKBP4Q02790 459 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMAD1-213ENST00000514778 TAF7LQ5H9L4 462 aa8.84□□□□□ -0.99
SMAD1-213ENST00000514778 SRCAPQ6ZRS2 3230 aa8.84□□□□□ -0.99
SMAD1-213ENST00000514778 COPRSQ9NQ92 184 aa8.84□□□□□ -0.99
SMAD1-213ENST00000514778 SEC31BQ9NQW1 1179 aa8.84□□□□□ -0.99
SMAD1-213ENST00000514778 COG6Q9Y2V7 657 aa8.84□□□□□ -0.99
SMAD1-213ENST00000514778 LRRFIP2Q9Y608 721 aaKnown RBP8.84□□□□□ -0.99
SMAD1-213ENST00000514778 XDHP47989 1333 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 MROH5Q6ZUA9 1318 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 ZC3H4Q9UPT8 1303 aaKnown RBP8.83□□□□□ -1
SMAD1-213ENST00000514778 CIAO1O76071 339 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 CENPBP07199 599 aaPredicted RBP8.83□□□□□ -1
SMAD1-213ENST00000514778 ATP8B2P98198 1209 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 MMRN1Q13201 1228 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 C20orf194Q5TEA3 1177 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 DPP8Q6V1X1 898 aaPredicted RBP8.83□□□□□ -1
SMAD1-213ENST00000514778 LDHAL6AQ6ZMR3 332 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 ARHGAP27Q6ZUM4 889 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 MPNDQ8N594 471 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 TAOK3Q9H2K8 898 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 MINPP1Q9UNW1 487 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 LEMD3Q9Y2U8 911 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 CHMP3Q9Y3E7 222 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 MYH3P11055 1940 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 LRRC37AA6NMS7 1700 aa8.83□□□□□ -1
SMAD1-213ENST00000514778 NFKBIEO00221 500 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 SRGAP3O43295 1099 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 PPP1R37O75864 691 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 LMNB1P20700 586 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 ATP2B4P23634 1241 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 RFX5P48382 616 aaPredicted RBP8.82□□□□□ -1
SMAD1-213ENST00000514778 VARS2Q5ST30 1063 aaKnown RBP8.82□□□□□ -1
SMAD1-213ENST00000514778 TMC2Q8TDI7 906 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 SSH3Q8TE77 659 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 CCDC85AQ96PX6 553 aaPredicted RBP8.82□□□□□ -1
SMAD1-213ENST00000514778 EYA3Q99504 573 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 RIPOR2Q9Y4F9 1068 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 SUPT16HQ9Y5B9 1047 aaKnown RBP8.82□□□□□ -1
SMAD1-213ENST00000514778 SLX4Q8IY92 1834 aa8.82□□□□□ -1
SMAD1-213ENST00000514778 EYA2O00167 538 aa8.81□□□□□ -1
SMAD1-213ENST00000514778 HMMRO75330 724 aa8.81□□□□□ -1
SMAD1-213ENST00000514778 IL15P40933 162 aaPredicted RBP8.81□□□□□ -1
SMAD1-213ENST00000514778 PTPN12Q05209 780 aaKnown RBP8.81□□□□□ -1
SMAD1-213ENST00000514778 CEP85Q6P2H3 762 aa8.81□□□□□ -1
SMAD1-213ENST00000514778 C15orf52Q6ZUT6 534 aaKnown RBP8.81□□□□□ -1
SMAD1-213ENST00000514778 CNNM1Q9NRU3 951 aa8.81□□□□□ -1
SMAD1-213ENST00000514778 NSFL1CQ9UNZ2 370 aaKnown RBP8.81□□□□□ -1
SMAD1-213ENST00000514778 SLC34A2O95436 690 aa8.8□□□□□ -1
SMAD1-213ENST00000514778 IARSP41252 1262 aaKnown RBP8.8□□□□□ -1
SMAD1-213ENST00000514778 GPSM2P81274 684 aa8.8□□□□□ -1
SMAD1-213ENST00000514778 KIAA2012Q0VF49 1180 aa8.8□□□□□ -1
SMAD1-213ENST00000514778 UBE4AQ14139 1066 aa8.8□□□□□ -1
SMAD1-213ENST00000514778 HSP90AB4PQ58FF6 505 aa8.8□□□□□ -1
SMAD1-213ENST00000514778 ARSIQ5FYB1 569 aa8.8□□□□□ -1
SMAD1-213ENST00000514778 TBC1D16Q8TBP0 767 aa8.8□□□□□ -1
SMAD1-213ENST00000514778 ANKIB1Q9P2G1 1089 aa8.8□□□□□ -1
SMAD1-213ENST00000514778 GGA1Q9UJY5 639 aa8.8□□□□□ -1
SMAD1-213ENST00000514778 NOP58Q9Y2X3 529 aaKnown RBP8.8□□□□□ -1
SMAD1-213ENST00000514778 FER1L6Q2WGJ9 1857 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 MED23Q9ULK4 1368 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 PDE8BO95263 885 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 CHRNDQ07001 517 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 WASHC4Q2M389 1173 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 ERC1Q8IUD2 1116 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 VGLL2Q8N8G2 317 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 JDP2Q8WYK2 163 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 ZNF594Q96JF6 807 aaPredicted RBP8.79□□□□□ -1
SMAD1-213ENST00000514778 ZC3H12CQ9C0D7 883 aaKnown RBP8.79□□□□□ -1
SMAD1-213ENST00000514778 RYDENQ9NUL5 291 aaKnown RBP8.79□□□□□ -1
SMAD1-213ENST00000514778 WWC3Q9ULE0 1092 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 LTBP1Q14766 1721 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 ZNF804BA4D1E1 1349 aa8.79□□□□□ -1
SMAD1-213ENST00000514778 PNMA6EA0A0J9YXQ4 647 aa8.78□□□□□ -1
SMAD1-213ENST00000514778 C6orf229H3BNL8 230 aa8.78□□□□□ -1
SMAD1-213ENST00000514778 G3BP1Q13283 466 aaKnown RBP eCLIP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms