RNA–Protein interactions for RNA: ENST00000514316.1

SEMA6A-213, Transcript of semaphorin 6A, humanhuman

TSL 4

Gene SEMA6A, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-213ENST00000514316 CCDC74AQ96AQ1 378 aa11□□□□□ -0.65
SEMA6A-213ENST00000514316 RASSF4Q9H2L5 321 aa11□□□□□ -0.65
SEMA6A-213ENST00000514316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11□□□□□ -0.65
SEMA6A-213ENST00000514316 P4HBP07237 508 aaKnown RBP10.99□□□□□ -0.65
SEMA6A-213ENST00000514316 ATP11AP98196 1134 aa10.99□□□□□ -0.65
SEMA6A-213ENST00000514316 CEP135Q66GS9 1140 aa10.99□□□□□ -0.65
SEMA6A-213ENST00000514316 ALG1LQ6GMV1 187 aa10.99□□□□□ -0.65
SEMA6A-213ENST00000514316 C8orf86Q6ZUL3 223 aa10.99□□□□□ -0.65
SEMA6A-213ENST00000514316 NPAS4Q8IUM7 802 aa10.99□□□□□ -0.65
SEMA6A-213ENST00000514316 OSMRQ99650 979 aa10.99□□□□□ -0.65
SEMA6A-213ENST00000514316 NCAPD3P42695 1498 aa10.99□□□□□ -0.65
SEMA6A-213ENST00000514316 RNF225M0QZC1 329 aaPredicted RBP10.98□□□□□ -0.65
SEMA6A-213ENST00000514316 GRIK5Q16478 980 aa10.98□□□□□ -0.65
SEMA6A-213ENST00000514316 TMEM102Q8N9M5 508 aaPredicted RBP10.98□□□□□ -0.65
SEMA6A-213ENST00000514316 ZKSCAN3Q9BRR0 538 aa10.98□□□□□ -0.65
SEMA6A-213ENST00000514316 PDE2AO00408 941 aaPredicted RBP10.97□□□□□ -0.65
SEMA6A-213ENST00000514316 NID1P14543 1247 aa10.97□□□□□ -0.65
SEMA6A-213ENST00000514316 EAPPQ56P03 285 aaPredicted RBP10.97□□□□□ -0.65
SEMA6A-213ENST00000514316 KIAA0319Q5VV43 1072 aa10.97□□□□□ -0.65
SEMA6A-213ENST00000514316 PEAR1Q5VY43 1037 aaPredicted RBP10.97□□□□□ -0.65
SEMA6A-213ENST00000514316 NPHS2Q9NP85 383 aa10.97□□□□□ -0.65
SEMA6A-213ENST00000514316 NOP53Q9NZM5 478 aaKnown RBP10.97□□□□□ -0.65
SEMA6A-213ENST00000514316 ATAD2BQ9ULI0 1458 aa10.97□□□□□ -0.65
SEMA6A-213ENST00000514316 CNTNAP5Q8WYK1 1306 aa10.96□□□□□ -0.65
SEMA6A-213ENST00000514316 A0A1W2PP55 124 aa10.96□□□□□ -0.65
SEMA6A-213ENST00000514316 SPDYE3A6NKU9 549 aa10.96□□□□□ -0.65
SEMA6A-213ENST00000514316 NFKBIEO00221 500 aa10.96□□□□□ -0.65
SEMA6A-213ENST00000514316 PTPRAP18433 802 aa10.96□□□□□ -0.65
SEMA6A-213ENST00000514316 COL9A3Q14050 684 aaPredicted RBP10.96□□□□□ -0.65
SEMA6A-213ENST00000514316 LATS2Q9NRM7 1088 aa10.96□□□□□ -0.65
SEMA6A-213ENST00000514316 NLRP2Q9NX02 1062 aa10.96□□□□□ -0.65
SEMA6A-213ENST00000514316 FAM177BA6PVY3 158 aa10.95□□□□□ -0.66
SEMA6A-213ENST00000514316 LDHBP07195 334 aaKnown RBP10.95□□□□□ -0.66
SEMA6A-213ENST00000514316 ACPPP15309 386 aa10.95□□□□□ -0.66
SEMA6A-213ENST00000514316 MSL1Q68DK7 614 aa10.95□□□□□ -0.66
SEMA6A-213ENST00000514316 GDF6Q6KF10 455 aaPredicted RBP10.95□□□□□ -0.66
SEMA6A-213ENST00000514316 WFDC8Q8IUA0 241 aa10.95□□□□□ -0.66
SEMA6A-213ENST00000514316 MUC3BQ9H195 1237 aa10.95□□□□□ -0.66
SEMA6A-213ENST00000514316 TRIM33Q9UPN9 1127 aa10.95□□□□□ -0.66
SEMA6A-213ENST00000514316 SMARCA4P51532 1647 aa10.95□□□□□ -0.66
SEMA6A-213ENST00000514316 NXPE3Q969Y0 559 aa10.94□□□□□ -0.66
SEMA6A-213ENST00000514316 POP1Q99575 1024 aaKnown RBP10.94□□□□□ -0.66
SEMA6A-213ENST00000514316 BHLHE41Q9C0J9 482 aaPredicted RBP10.94□□□□□ -0.66
SEMA6A-213ENST00000514316 SMARCA2P51531 1590 aa10.94□□□□□ -0.66
SEMA6A-213ENST00000514316 GADD45BO75293 160 aaPredicted RBP10.93□□□□□ -0.66
SEMA6A-213ENST00000514316 TRIM11Q96F44 468 aa10.93□□□□□ -0.66
SEMA6A-213ENST00000514316 ADAM19Q9H013 955 aa10.93□□□□□ -0.66
SEMA6A-213ENST00000514316 EHD4Q9H223 541 aa10.93□□□□□ -0.66
SEMA6A-213ENST00000514316 SUV39H2Q9H5I1 410 aa10.93□□□□□ -0.66
SEMA6A-213ENST00000514316 LIN7BQ9HAP6 207 aa10.93□□□□□ -0.66
SEMA6A-213ENST00000514316 TRAK1Q9UPV9 953 aa10.93□□□□□ -0.66
SEMA6A-213ENST00000514316 PRPF40AO75400 957 aaKnown RBP10.92□□□□□ -0.66
SEMA6A-213ENST00000514316 CDC27P30260 824 aa10.92□□□□□ -0.66
SEMA6A-213ENST00000514316 IL22RA1Q8N6P7 574 aa10.92□□□□□ -0.66
SEMA6A-213ENST00000514316 EPS8L3Q8TE67 593 aaKnown RBP10.92□□□□□ -0.66
SEMA6A-213ENST00000514316 PLVAPQ9BX97 442 aa10.92□□□□□ -0.66
SEMA6A-213ENST00000514316 CCDC9Q9Y3X0 531 aaKnown RBP10.92□□□□□ -0.66
SEMA6A-213ENST00000514316 HMGXB3Q12766 1538 aa10.91□□□□□ -0.66
SEMA6A-213ENST00000514316 TRPA1O75762 1119 aa10.91□□□□□ -0.66
SEMA6A-213ENST00000514316 IRS1P35568 1242 aa10.91□□□□□ -0.66
SEMA6A-213ENST00000514316 TRAPPC3LQ5T215 181 aa10.91□□□□□ -0.66
SEMA6A-213ENST00000514316 ALYREFQ86V81 257 aaKnown RBP10.91□□□□□ -0.66
SEMA6A-213ENST00000514316 CCNJLQ8IV13 435 aa10.91□□□□□ -0.66
SEMA6A-213ENST00000514316 DTWD1Q8N5C7 304 aa10.91□□□□□ -0.66
SEMA6A-213ENST00000514316 LACRTQ9GZZ8 138 aa10.91□□□□□ -0.66
SEMA6A-213ENST00000514316 PPP4R2Q9NY27 417 aa10.91□□□□□ -0.66
SEMA6A-213ENST00000514316 BAZ1BQ9UIG0 1483 aaKnown RBP10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 GIPC1O14908 333 aa10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 PRPF40BQ6NWY9 871 aaKnown RBP10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 ILDR2Q71H61 639 aa10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 FBXO33Q7Z6M2 555 aa10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 BSNDQ8WZ55 320 aa10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 FRMD6Q96NE9 622 aa10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 HHIPQ96QV1 700 aa10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 SRA1Q9HD15 236 aaKnown RBP10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 WWC3Q9ULE0 1092 aa10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 PPME1Q9Y570 386 aa10.9□□□□□ -0.66
SEMA6A-213ENST00000514316 BAG6P46379 1132 aa10.89□□□□□ -0.67
SEMA6A-213ENST00000514316 CABP4P57796 275 aa10.89□□□□□ -0.67
SEMA6A-213ENST00000514316 RAC1P63000 192 aa10.89□□□□□ -0.67
SEMA6A-213ENST00000514316 DMRTC2Q8IXT2 367 aaPredicted RBP10.89□□□□□ -0.67
SEMA6A-213ENST00000514316 TCF12Q99081 682 aa10.89□□□□□ -0.67
SEMA6A-213ENST00000514316 SPG7Q9UQ90 795 aa10.89□□□□□ -0.67
SEMA6A-213ENST00000514316 THOC2Q8NI27 1593 aaKnown RBP10.89□□□□□ -0.67
SEMA6A-213ENST00000514316 GRM2Q14416 872 aa10.88□□□□□ -0.67
SEMA6A-213ENST00000514316 PRRT3Q5FWE3 981 aa10.88□□□□□ -0.67
SEMA6A-213ENST00000514316 MAP4K3Q8IVH8 894 aa10.88□□□□□ -0.67
SEMA6A-213ENST00000514316 ASAP3Q8TDY4 903 aa10.88□□□□□ -0.67
SEMA6A-213ENST00000514316 DCAF11Q8TEB1 546 aa10.88□□□□□ -0.67
SEMA6A-213ENST00000514316 SRCIN1Q9C0H9 1055 aa10.88□□□□□ -0.67
SEMA6A-213ENST00000514316 TRIM28Q13263 835 aaKnown RBP10.87□□□□□ -0.67
SEMA6A-213ENST00000514316 FAM117BQ6P1L5 589 aa10.87□□□□□ -0.67
SEMA6A-213ENST00000514316 PI16Q6UXB8 463 aa10.87□□□□□ -0.67
SEMA6A-213ENST00000514316 SETDB2Q96T68 719 aa10.87□□□□□ -0.67
SEMA6A-213ENST00000514316 SOX13Q9UN79 622 aa10.87□□□□□ -0.67
SEMA6A-213ENST00000514316 KIF21AQ7Z4S6 1674 aa10.87□□□□□ -0.67
SEMA6A-213ENST00000514316 A0A0A0MRY4 1105 aa10.86□□□□□ -0.67
SEMA6A-213ENST00000514316 BCL2L13Q9BXK5 485 aa10.86□□□□□ -0.67
SEMA6A-213ENST00000514316 BCO2Q9BYV7 579 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms